DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation
- Autores
- Quaglia, Federica; Mészáros, Bálint; Salladini, Edoardo; Hatos, András; Pancsa, Rita; Chemes, Lucia Beatriz; Pajkos, Mátyás; Lazar, Tamas; Peña Díaz, Samuel; Santos, Jaime; Ács, Veronika; Farahi, Nazanin; Fichó, Erzsébet; Aspromonte, Maria Cristina; Bassot, Claudio; Chasapi, Anastasia; Davey, Norman E.; Davidović, Radoslav; Laszlo, Dobson; Elofsson, Arne; Erdős, Gábor; Gaudet, Pascale; Giglio, Michelle; Glavina, Juliana; Iserte, Javier Alonso; Iglesias, Valentín; Kálmán, Zsófia; Lambrughi, Matteo; Leonardi, Emanuela; Rodriguez Sawicki, Luciana
- Año de publicación
- 2022
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- The Database of Intrinsically Disordered Proteins (DisProt, URL: https://disprot.org) is the major repository of manually curated annotations of intrinsically disordered proteins and regions from the literature. We report here recent updates of DisProt version 9, including a restyled web interface, refactored Intrinsically Disordered Proteins Ontology (IDPO), improvements in the curation process and significant content growth of around 30%. Higher quality and consistency of annotations is provided by a newly implemented reviewing process and training of curators. The increased curation capacity is fostered by the integration of DisProt with APICURON, a dedicated resource for the proper attribution and recognition of biocuration efforts. Better interoperability is provided through the adoption of the Minimum Information About Disorder (MIADE) standard, an active collaboration with the Gene Ontology (GO) and Evidence and Conclusion Ontology (ECO) consortia and the support of the ELIXIR infrastructure.
Fil: Quaglia, Federica. Università di Padova; Italia. Consiglio Nazionale delle Ricerche; Italia
Fil: Mészáros, Bálint. European Molecular Biology Laboratory; Alemania
Fil: Salladini, Edoardo. Università di Padova; Italia
Fil: Hatos, András. Università di Padova; Italia
Fil: Pancsa, Rita. Research Centre for Natural Sciences; Hungría
Fil: Chemes, Lucia Beatriz. Universidad Nacional de San Martín. Instituto de Investigaciones Biotecnológicas. - Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Biotecnológicas; Argentina
Fil: Pajkos, Mátyás. Eötvös Loránd University; Hungría
Fil: Lazar, Tamas. Vlaams Instituut voor Biotechnology; Hungría. Vrije Unviversiteit Brussel; Bélgica
Fil: Peña Díaz, Samuel. Universitat Autònoma de Barcelona; España
Fil: Santos, Jaime. Universitat Autònoma de Barcelona; España
Fil: Ács, Veronika. Research Centre for Natural Sciences; Hungría
Fil: Farahi, Nazanin. Vlaams Instituut voor Biotechnology; Bélgica. Vrije Unviversiteit Brussel; Bélgica
Fil: Fichó, Erzsébet. Research Centre for Natural Sciences; Hungría
Fil: Aspromonte, Maria Cristina. Università di Padova; Italia. Città della Speranza Pediatric Research Institute; Italia
Fil: Bassot, Claudio. Stockholms Universitet; Suecia
Fil: Chasapi, Anastasia. Centre for Research & Technology Hellas; Grecia
Fil: Davey, Norman E.. Chester Beatty Laboratories; Reino Unido
Fil: Davidović, Radoslav. University of Belgrade; Serbia
Fil: Laszlo, Dobson. European Molecular Biology Laboratory; Alemania. Research Centre for Natural Sciences; Hungría
Fil: Elofsson, Arne. Stockholms Universitet; Suecia
Fil: Erdős, Gábor. Eötvös Loránd University; Hungría
Fil: Gaudet, Pascale. Swiss Institute of Bioinformatics; Suiza
Fil: Giglio, Michelle. University of Maryland School of Medicine; Estados Unidos
Fil: Glavina, Juliana. Universidad Nacional de San Martín. Instituto de Investigaciones Biotecnológicas. - Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Biotecnológicas; Argentina
Fil: Iserte, Javier Alonso. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Bioquímicas de Buenos Aires. Fundación Instituto Leloir. Instituto de Investigaciones Bioquímicas de Buenos Aires; Argentina
Fil: Iglesias, Valentín. Universitat Autònoma de Barcelona; España
Fil: Kálmán, Zsófia. Pázmány Péter Catholic University; Hungría
Fil: Lambrughi, Matteo. Danish Cancer Society Research Center; Dinamarca
Fil: Leonardi, Emanuela. Università di Padova; Italia. Pediatric Research Institute Città della Speranza; Italia
Fil: Rodriguez Sawicki, Luciana. Universidad Nacional de Quilmes. Departamento de Ciencia y Tecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina - Materia
-
INTRISICALLY DISORDER PROTEINS
DATABASE
GENE ONTHOLOGY
BIOCURATION - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by/2.5/ar/
- Repositorio
.jpg)
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/166797
Ver los metadatos del registro completo
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DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotationQuaglia, FedericaMészáros, BálintSalladini, EdoardoHatos, AndrásPancsa, RitaChemes, Lucia BeatrizPajkos, MátyásLazar, TamasPeña Díaz, SamuelSantos, JaimeÁcs, VeronikaFarahi, NazaninFichó, ErzsébetAspromonte, Maria CristinaBassot, ClaudioChasapi, AnastasiaDavey, Norman E.Davidović, RadoslavLaszlo, DobsonElofsson, ArneErdős, GáborGaudet, PascaleGiglio, MichelleGlavina, JulianaIserte, Javier AlonsoIglesias, ValentínKálmán, ZsófiaLambrughi, MatteoLeonardi, EmanuelaRodriguez Sawicki, LucianaINTRISICALLY DISORDER PROTEINSDATABASEGENE ONTHOLOGYBIOCURATIONhttps://purl.org/becyt/ford/1.2https://purl.org/becyt/ford/1The Database of Intrinsically Disordered Proteins (DisProt, URL: https://disprot.org) is the major repository of manually curated annotations of intrinsically disordered proteins and regions from the literature. We report here recent updates of DisProt version 9, including a restyled web interface, refactored Intrinsically Disordered Proteins Ontology (IDPO), improvements in the curation process and significant content growth of around 30%. Higher quality and consistency of annotations is provided by a newly implemented reviewing process and training of curators. The increased curation capacity is fostered by the integration of DisProt with APICURON, a dedicated resource for the proper attribution and recognition of biocuration efforts. Better interoperability is provided through the adoption of the Minimum Information About Disorder (MIADE) standard, an active collaboration with the Gene Ontology (GO) and Evidence and Conclusion Ontology (ECO) consortia and the support of the ELIXIR infrastructure.Fil: Quaglia, Federica. Università di Padova; Italia. Consiglio Nazionale delle Ricerche; ItaliaFil: Mészáros, Bálint. European Molecular Biology Laboratory; AlemaniaFil: Salladini, Edoardo. Università di Padova; ItaliaFil: Hatos, András. Università di Padova; ItaliaFil: Pancsa, Rita. Research Centre for Natural Sciences; HungríaFil: Chemes, Lucia Beatriz. Universidad Nacional de San Martín. Instituto de Investigaciones Biotecnológicas. - Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Biotecnológicas; ArgentinaFil: Pajkos, Mátyás. Eötvös Loránd University; HungríaFil: Lazar, Tamas. Vlaams Instituut voor Biotechnology; Hungría. Vrije Unviversiteit Brussel; BélgicaFil: Peña Díaz, Samuel. Universitat Autònoma de Barcelona; EspañaFil: Santos, Jaime. Universitat Autònoma de Barcelona; EspañaFil: Ács, Veronika. Research Centre for Natural Sciences; HungríaFil: Farahi, Nazanin. Vlaams Instituut voor Biotechnology; Bélgica. Vrije Unviversiteit Brussel; BélgicaFil: Fichó, Erzsébet. Research Centre for Natural Sciences; HungríaFil: Aspromonte, Maria Cristina. Università di Padova; Italia. Città della Speranza Pediatric Research Institute; ItaliaFil: Bassot, Claudio. Stockholms Universitet; SueciaFil: Chasapi, Anastasia. Centre for Research & Technology Hellas; GreciaFil: Davey, Norman E.. Chester Beatty Laboratories; Reino UnidoFil: Davidović, Radoslav. University of Belgrade; SerbiaFil: Laszlo, Dobson. European Molecular Biology Laboratory; Alemania. Research Centre for Natural Sciences; HungríaFil: Elofsson, Arne. Stockholms Universitet; SueciaFil: Erdős, Gábor. Eötvös Loránd University; HungríaFil: Gaudet, Pascale. Swiss Institute of Bioinformatics; SuizaFil: Giglio, Michelle. University of Maryland School of Medicine; Estados UnidosFil: Glavina, Juliana. Universidad Nacional de San Martín. Instituto de Investigaciones Biotecnológicas. - Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Biotecnológicas; ArgentinaFil: Iserte, Javier Alonso. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Bioquímicas de Buenos Aires. Fundación Instituto Leloir. Instituto de Investigaciones Bioquímicas de Buenos Aires; ArgentinaFil: Iglesias, Valentín. Universitat Autònoma de Barcelona; EspañaFil: Kálmán, Zsófia. Pázmány Péter Catholic University; HungríaFil: Lambrughi, Matteo. Danish Cancer Society Research Center; DinamarcaFil: Leonardi, Emanuela. Università di Padova; Italia. Pediatric Research Institute Città della Speranza; ItaliaFil: Rodriguez Sawicki, Luciana. Universidad Nacional de Quilmes. Departamento de Ciencia y Tecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaOxford University Press2022-01-07info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/166797Quaglia, Federica; Mészáros, Bálint; Salladini, Edoardo; Hatos, András; Pancsa, Rita; et al.; DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation; Oxford University Press; Nucleic Acids Research; 50; D1; 7-1-2022; D480-D4870305-10481362-4962CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkab1082/6439667info:eu-repo/semantics/altIdentifier/doi/10.1093/nar/gkab1082info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T10:09:21Zoai:ri.conicet.gov.ar:11336/166797instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 10:09:22.095CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
| dc.title.none.fl_str_mv |
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation |
| title |
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation |
| spellingShingle |
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation Quaglia, Federica INTRISICALLY DISORDER PROTEINS DATABASE GENE ONTHOLOGY BIOCURATION |
| title_short |
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation |
| title_full |
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation |
| title_fullStr |
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation |
| title_full_unstemmed |
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation |
| title_sort |
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation |
| dc.creator.none.fl_str_mv |
Quaglia, Federica Mészáros, Bálint Salladini, Edoardo Hatos, András Pancsa, Rita Chemes, Lucia Beatriz Pajkos, Mátyás Lazar, Tamas Peña Díaz, Samuel Santos, Jaime Ács, Veronika Farahi, Nazanin Fichó, Erzsébet Aspromonte, Maria Cristina Bassot, Claudio Chasapi, Anastasia Davey, Norman E. Davidović, Radoslav Laszlo, Dobson Elofsson, Arne Erdős, Gábor Gaudet, Pascale Giglio, Michelle Glavina, Juliana Iserte, Javier Alonso Iglesias, Valentín Kálmán, Zsófia Lambrughi, Matteo Leonardi, Emanuela Rodriguez Sawicki, Luciana |
| author |
Quaglia, Federica |
| author_facet |
Quaglia, Federica Mészáros, Bálint Salladini, Edoardo Hatos, András Pancsa, Rita Chemes, Lucia Beatriz Pajkos, Mátyás Lazar, Tamas Peña Díaz, Samuel Santos, Jaime Ács, Veronika Farahi, Nazanin Fichó, Erzsébet Aspromonte, Maria Cristina Bassot, Claudio Chasapi, Anastasia Davey, Norman E. Davidović, Radoslav Laszlo, Dobson Elofsson, Arne Erdős, Gábor Gaudet, Pascale Giglio, Michelle Glavina, Juliana Iserte, Javier Alonso Iglesias, Valentín Kálmán, Zsófia Lambrughi, Matteo Leonardi, Emanuela Rodriguez Sawicki, Luciana |
| author_role |
author |
| author2 |
Mészáros, Bálint Salladini, Edoardo Hatos, András Pancsa, Rita Chemes, Lucia Beatriz Pajkos, Mátyás Lazar, Tamas Peña Díaz, Samuel Santos, Jaime Ács, Veronika Farahi, Nazanin Fichó, Erzsébet Aspromonte, Maria Cristina Bassot, Claudio Chasapi, Anastasia Davey, Norman E. Davidović, Radoslav Laszlo, Dobson Elofsson, Arne Erdős, Gábor Gaudet, Pascale Giglio, Michelle Glavina, Juliana Iserte, Javier Alonso Iglesias, Valentín Kálmán, Zsófia Lambrughi, Matteo Leonardi, Emanuela Rodriguez Sawicki, Luciana |
| author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
| dc.subject.none.fl_str_mv |
INTRISICALLY DISORDER PROTEINS DATABASE GENE ONTHOLOGY BIOCURATION |
| topic |
INTRISICALLY DISORDER PROTEINS DATABASE GENE ONTHOLOGY BIOCURATION |
| purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.2 https://purl.org/becyt/ford/1 |
| dc.description.none.fl_txt_mv |
The Database of Intrinsically Disordered Proteins (DisProt, URL: https://disprot.org) is the major repository of manually curated annotations of intrinsically disordered proteins and regions from the literature. We report here recent updates of DisProt version 9, including a restyled web interface, refactored Intrinsically Disordered Proteins Ontology (IDPO), improvements in the curation process and significant content growth of around 30%. Higher quality and consistency of annotations is provided by a newly implemented reviewing process and training of curators. The increased curation capacity is fostered by the integration of DisProt with APICURON, a dedicated resource for the proper attribution and recognition of biocuration efforts. Better interoperability is provided through the adoption of the Minimum Information About Disorder (MIADE) standard, an active collaboration with the Gene Ontology (GO) and Evidence and Conclusion Ontology (ECO) consortia and the support of the ELIXIR infrastructure. Fil: Quaglia, Federica. Università di Padova; Italia. Consiglio Nazionale delle Ricerche; Italia Fil: Mészáros, Bálint. European Molecular Biology Laboratory; Alemania Fil: Salladini, Edoardo. Università di Padova; Italia Fil: Hatos, András. Università di Padova; Italia Fil: Pancsa, Rita. Research Centre for Natural Sciences; Hungría Fil: Chemes, Lucia Beatriz. Universidad Nacional de San Martín. Instituto de Investigaciones Biotecnológicas. - Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Biotecnológicas; Argentina Fil: Pajkos, Mátyás. Eötvös Loránd University; Hungría Fil: Lazar, Tamas. Vlaams Instituut voor Biotechnology; Hungría. Vrije Unviversiteit Brussel; Bélgica Fil: Peña Díaz, Samuel. Universitat Autònoma de Barcelona; España Fil: Santos, Jaime. Universitat Autònoma de Barcelona; España Fil: Ács, Veronika. Research Centre for Natural Sciences; Hungría Fil: Farahi, Nazanin. Vlaams Instituut voor Biotechnology; Bélgica. Vrije Unviversiteit Brussel; Bélgica Fil: Fichó, Erzsébet. Research Centre for Natural Sciences; Hungría Fil: Aspromonte, Maria Cristina. Università di Padova; Italia. Città della Speranza Pediatric Research Institute; Italia Fil: Bassot, Claudio. Stockholms Universitet; Suecia Fil: Chasapi, Anastasia. Centre for Research & Technology Hellas; Grecia Fil: Davey, Norman E.. Chester Beatty Laboratories; Reino Unido Fil: Davidović, Radoslav. University of Belgrade; Serbia Fil: Laszlo, Dobson. European Molecular Biology Laboratory; Alemania. Research Centre for Natural Sciences; Hungría Fil: Elofsson, Arne. Stockholms Universitet; Suecia Fil: Erdős, Gábor. Eötvös Loránd University; Hungría Fil: Gaudet, Pascale. Swiss Institute of Bioinformatics; Suiza Fil: Giglio, Michelle. University of Maryland School of Medicine; Estados Unidos Fil: Glavina, Juliana. Universidad Nacional de San Martín. Instituto de Investigaciones Biotecnológicas. - Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Biotecnológicas; Argentina Fil: Iserte, Javier Alonso. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Bioquímicas de Buenos Aires. Fundación Instituto Leloir. Instituto de Investigaciones Bioquímicas de Buenos Aires; Argentina Fil: Iglesias, Valentín. Universitat Autònoma de Barcelona; España Fil: Kálmán, Zsófia. Pázmány Péter Catholic University; Hungría Fil: Lambrughi, Matteo. Danish Cancer Society Research Center; Dinamarca Fil: Leonardi, Emanuela. Università di Padova; Italia. Pediatric Research Institute Città della Speranza; Italia Fil: Rodriguez Sawicki, Luciana. Universidad Nacional de Quilmes. Departamento de Ciencia y Tecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina |
| description |
The Database of Intrinsically Disordered Proteins (DisProt, URL: https://disprot.org) is the major repository of manually curated annotations of intrinsically disordered proteins and regions from the literature. We report here recent updates of DisProt version 9, including a restyled web interface, refactored Intrinsically Disordered Proteins Ontology (IDPO), improvements in the curation process and significant content growth of around 30%. Higher quality and consistency of annotations is provided by a newly implemented reviewing process and training of curators. The increased curation capacity is fostered by the integration of DisProt with APICURON, a dedicated resource for the proper attribution and recognition of biocuration efforts. Better interoperability is provided through the adoption of the Minimum Information About Disorder (MIADE) standard, an active collaboration with the Gene Ontology (GO) and Evidence and Conclusion Ontology (ECO) consortia and the support of the ELIXIR infrastructure. |
| publishDate |
2022 |
| dc.date.none.fl_str_mv |
2022-01-07 |
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info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
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article |
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http://hdl.handle.net/11336/166797 Quaglia, Federica; Mészáros, Bálint; Salladini, Edoardo; Hatos, András; Pancsa, Rita; et al.; DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation; Oxford University Press; Nucleic Acids Research; 50; D1; 7-1-2022; D480-D487 0305-1048 1362-4962 CONICET Digital CONICET |
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http://hdl.handle.net/11336/166797 |
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Quaglia, Federica; Mészáros, Bálint; Salladini, Edoardo; Hatos, András; Pancsa, Rita; et al.; DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation; Oxford University Press; Nucleic Acids Research; 50; D1; 7-1-2022; D480-D487 0305-1048 1362-4962 CONICET Digital CONICET |
| dc.language.none.fl_str_mv |
eng |
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eng |
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Oxford University Press |
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Oxford University Press |
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