Characterization of papain-like isoenzymes from latex of Asclepias curassavica by molecular biology validated by proteomic approach

Autores
Obregón, Walter David; Liggieri, Constanza Silvina; Trejo, Sebastián Alejandro; Avilés, Francesc X.; Vairo Cavalli, Sandra Elizabeth; Priolo de Lufrano, Nora Silvia
Año de publicación
2009
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Latices from Asclepias spp are used in wound healing and the treatment of some digestive disorders. These pharmacological actions have been attributed to the presence of cysteine proteases in these milky latices. Asclepias curassavica (Asclepiadaceae), “scarlet milkweed” is a perennial subshrub native to South America. In the current paper we report a new approach directed at the selective biochemical and molecular characterization of asclepain cI (acI) and asclepain cII (acII), the enzymes responsible for the proteolytic activity of the scarlet milkweed latex. SDS-PAGE spots of both purified peptidases were digested with trypsin and Peptide Mass Fingerprints (PMFs) obtained showed no equivalent peptides. No identification was possible by MASCOT search due to the paucity of information concerning Asclepiadaceae latex cysteine proteinases available in databases. From total RNA extracted from latex samples, cDNA of both peptidases was obtained by RT-PCR using degenerate primers encoding Asclepiadaceae cysteine peptidase conserved domains. Theoretical PMFs of partial polypeptide sequences obtained by cloning (186 and 185 amino acids) were compared with empirical PMFs, confirming that the sequences of 186 and 185 amino acids correspond to acI and acII, respectively. N-terminal sequences of acI and acII, characterized by Edman sequencing, were overlapped with those coming from the cDNA to obtain the full-length sequence of both mature peptidases (212 and 211 residues respectively). Alignment and phylogenetic analysis confirmed that acI and acII belong to the subfamily C1A forming a new group of papain-like cysteine peptidases together with asclepain f from Asclepias fruticosa. We conclude that PMF could be adopted as an excellent tool to differentiate, in a fast and unequivocal way, peptidases with very similar physicochemical and functional properties, with advantages over other conventional methods (for instance enzyme kinetics) that are time consuming and afford less reliable results.
Facultad de Ciencias Exactas
Comisión de Investigaciones Científicas de la provincia de Buenos Aires
Materia
Biología
Asclepias curassavica
Cysteine peptidase
Peptide mass fingerprint
Papain-like protease
Plant latex
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
SEDICI (UNLP)
Institución
Universidad Nacional de La Plata
OAI Identificador
oai:sedici.unlp.edu.ar:10915/82903

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network_name_str SEDICI (UNLP)
spelling Characterization of papain-like isoenzymes from latex of Asclepias curassavica by molecular biology validated by proteomic approachObregón, Walter DavidLiggieri, Constanza SilvinaTrejo, Sebastián AlejandroAvilés, Francesc X.Vairo Cavalli, Sandra ElizabethPriolo de Lufrano, Nora SilviaBiologíaAsclepias curassavicaCysteine peptidasePeptide mass fingerprintPapain-like proteasePlant latexLatices from Asclepias spp are used in wound healing and the treatment of some digestive disorders. These pharmacological actions have been attributed to the presence of cysteine proteases in these milky latices. Asclepias curassavica (Asclepiadaceae), “scarlet milkweed” is a perennial subshrub native to South America. In the current paper we report a new approach directed at the selective biochemical and molecular characterization of asclepain cI (acI) and asclepain cII (acII), the enzymes responsible for the proteolytic activity of the scarlet milkweed latex. SDS-PAGE spots of both purified peptidases were digested with trypsin and Peptide Mass Fingerprints (PMFs) obtained showed no equivalent peptides. No identification was possible by MASCOT search due to the paucity of information concerning Asclepiadaceae latex cysteine proteinases available in databases. From total RNA extracted from latex samples, cDNA of both peptidases was obtained by RT-PCR using degenerate primers encoding Asclepiadaceae cysteine peptidase conserved domains. Theoretical PMFs of partial polypeptide sequences obtained by cloning (186 and 185 amino acids) were compared with empirical PMFs, confirming that the sequences of 186 and 185 amino acids correspond to acI and acII, respectively. N-terminal sequences of acI and acII, characterized by Edman sequencing, were overlapped with those coming from the cDNA to obtain the full-length sequence of both mature peptidases (212 and 211 residues respectively). Alignment and phylogenetic analysis confirmed that acI and acII belong to the subfamily C1A forming a new group of papain-like cysteine peptidases together with asclepain f from Asclepias fruticosa. We conclude that PMF could be adopted as an excellent tool to differentiate, in a fast and unequivocal way, peptidases with very similar physicochemical and functional properties, with advantages over other conventional methods (for instance enzyme kinetics) that are time consuming and afford less reliable results.Facultad de Ciencias ExactasComisión de Investigaciones Científicas de la provincia de Buenos Aires2009info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionArticulohttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdf1457-1464http://sedici.unlp.edu.ar/handle/10915/82903enginfo:eu-repo/semantics/altIdentifier/issn/0300-9084info:eu-repo/semantics/altIdentifier/doi/10.1016/j.biochi.2009.07.017info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)reponame:SEDICI (UNLP)instname:Universidad Nacional de La Platainstacron:UNLP2025-10-15T11:07:33Zoai:sedici.unlp.edu.ar:10915/82903Institucionalhttp://sedici.unlp.edu.ar/Universidad públicaNo correspondehttp://sedici.unlp.edu.ar/oai/snrdalira@sedici.unlp.edu.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:13292025-10-15 11:07:33.686SEDICI (UNLP) - Universidad Nacional de La Platafalse
dc.title.none.fl_str_mv Characterization of papain-like isoenzymes from latex of Asclepias curassavica by molecular biology validated by proteomic approach
title Characterization of papain-like isoenzymes from latex of Asclepias curassavica by molecular biology validated by proteomic approach
spellingShingle Characterization of papain-like isoenzymes from latex of Asclepias curassavica by molecular biology validated by proteomic approach
Obregón, Walter David
Biología
Asclepias curassavica
Cysteine peptidase
Peptide mass fingerprint
Papain-like protease
Plant latex
title_short Characterization of papain-like isoenzymes from latex of Asclepias curassavica by molecular biology validated by proteomic approach
title_full Characterization of papain-like isoenzymes from latex of Asclepias curassavica by molecular biology validated by proteomic approach
title_fullStr Characterization of papain-like isoenzymes from latex of Asclepias curassavica by molecular biology validated by proteomic approach
title_full_unstemmed Characterization of papain-like isoenzymes from latex of Asclepias curassavica by molecular biology validated by proteomic approach
title_sort Characterization of papain-like isoenzymes from latex of Asclepias curassavica by molecular biology validated by proteomic approach
dc.creator.none.fl_str_mv Obregón, Walter David
Liggieri, Constanza Silvina
Trejo, Sebastián Alejandro
Avilés, Francesc X.
Vairo Cavalli, Sandra Elizabeth
Priolo de Lufrano, Nora Silvia
author Obregón, Walter David
author_facet Obregón, Walter David
Liggieri, Constanza Silvina
Trejo, Sebastián Alejandro
Avilés, Francesc X.
Vairo Cavalli, Sandra Elizabeth
Priolo de Lufrano, Nora Silvia
author_role author
author2 Liggieri, Constanza Silvina
Trejo, Sebastián Alejandro
Avilés, Francesc X.
Vairo Cavalli, Sandra Elizabeth
Priolo de Lufrano, Nora Silvia
author2_role author
author
author
author
author
dc.subject.none.fl_str_mv Biología
Asclepias curassavica
Cysteine peptidase
Peptide mass fingerprint
Papain-like protease
Plant latex
topic Biología
Asclepias curassavica
Cysteine peptidase
Peptide mass fingerprint
Papain-like protease
Plant latex
dc.description.none.fl_txt_mv Latices from Asclepias spp are used in wound healing and the treatment of some digestive disorders. These pharmacological actions have been attributed to the presence of cysteine proteases in these milky latices. Asclepias curassavica (Asclepiadaceae), “scarlet milkweed” is a perennial subshrub native to South America. In the current paper we report a new approach directed at the selective biochemical and molecular characterization of asclepain cI (acI) and asclepain cII (acII), the enzymes responsible for the proteolytic activity of the scarlet milkweed latex. SDS-PAGE spots of both purified peptidases were digested with trypsin and Peptide Mass Fingerprints (PMFs) obtained showed no equivalent peptides. No identification was possible by MASCOT search due to the paucity of information concerning Asclepiadaceae latex cysteine proteinases available in databases. From total RNA extracted from latex samples, cDNA of both peptidases was obtained by RT-PCR using degenerate primers encoding Asclepiadaceae cysteine peptidase conserved domains. Theoretical PMFs of partial polypeptide sequences obtained by cloning (186 and 185 amino acids) were compared with empirical PMFs, confirming that the sequences of 186 and 185 amino acids correspond to acI and acII, respectively. N-terminal sequences of acI and acII, characterized by Edman sequencing, were overlapped with those coming from the cDNA to obtain the full-length sequence of both mature peptidases (212 and 211 residues respectively). Alignment and phylogenetic analysis confirmed that acI and acII belong to the subfamily C1A forming a new group of papain-like cysteine peptidases together with asclepain f from Asclepias fruticosa. We conclude that PMF could be adopted as an excellent tool to differentiate, in a fast and unequivocal way, peptidases with very similar physicochemical and functional properties, with advantages over other conventional methods (for instance enzyme kinetics) that are time consuming and afford less reliable results.
Facultad de Ciencias Exactas
Comisión de Investigaciones Científicas de la provincia de Buenos Aires
description Latices from Asclepias spp are used in wound healing and the treatment of some digestive disorders. These pharmacological actions have been attributed to the presence of cysteine proteases in these milky latices. Asclepias curassavica (Asclepiadaceae), “scarlet milkweed” is a perennial subshrub native to South America. In the current paper we report a new approach directed at the selective biochemical and molecular characterization of asclepain cI (acI) and asclepain cII (acII), the enzymes responsible for the proteolytic activity of the scarlet milkweed latex. SDS-PAGE spots of both purified peptidases were digested with trypsin and Peptide Mass Fingerprints (PMFs) obtained showed no equivalent peptides. No identification was possible by MASCOT search due to the paucity of information concerning Asclepiadaceae latex cysteine proteinases available in databases. From total RNA extracted from latex samples, cDNA of both peptidases was obtained by RT-PCR using degenerate primers encoding Asclepiadaceae cysteine peptidase conserved domains. Theoretical PMFs of partial polypeptide sequences obtained by cloning (186 and 185 amino acids) were compared with empirical PMFs, confirming that the sequences of 186 and 185 amino acids correspond to acI and acII, respectively. N-terminal sequences of acI and acII, characterized by Edman sequencing, were overlapped with those coming from the cDNA to obtain the full-length sequence of both mature peptidases (212 and 211 residues respectively). Alignment and phylogenetic analysis confirmed that acI and acII belong to the subfamily C1A forming a new group of papain-like cysteine peptidases together with asclepain f from Asclepias fruticosa. We conclude that PMF could be adopted as an excellent tool to differentiate, in a fast and unequivocal way, peptidases with very similar physicochemical and functional properties, with advantages over other conventional methods (for instance enzyme kinetics) that are time consuming and afford less reliable results.
publishDate 2009
dc.date.none.fl_str_mv 2009
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
Articulo
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info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://sedici.unlp.edu.ar/handle/10915/82903
url http://sedici.unlp.edu.ar/handle/10915/82903
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/issn/0300-9084
info:eu-repo/semantics/altIdentifier/doi/10.1016/j.biochi.2009.07.017
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.format.none.fl_str_mv application/pdf
1457-1464
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instname:Universidad Nacional de La Plata
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