Insights into the evolutionary history of an extinct South American freshwater snail based on historical DNA

Autores
Vogler, Roberto Eugenio; Beltramino, Ariel Anibal; Strong, Ellen E.; Rumi Macchi Zubiaurre, Alejandra; Peso, Juana Guadalupe
Año de publicación
2016
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Fil: Vogler, Roberto Eugenio. Universidad Nacional de Misiones. Facultad de Ciencias Exactas, Químicas y Naturales. Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.
Fil: Vogler, Roberto Eugenio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (Nordeste). Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.
Fil: Vogler, Roberto Eugenio. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo. División de Zoología Invertebrados; Argentina.
Fil: Vogler, Roberto Eugenio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (La Plata). División de Zoología Invertebrados; Argentina.
Fil: Beltramino, Ariel Anibal. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo. División de Zoología Invertebrados; Argentina.
Fil: Beltramino, Ariel Anibal. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (La Plata). División de Zoología Invertebrados; Argentina.
Fil: Beltramino, Ariel Anibal. Universidad Nacional de Misiones. Facultad de Ciencias Exactas, Químicas y Naturales. Departamento de Biología; Argentina.
Fil: Rumi Macchi Zubiaurre, Alejandra. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo. División de Zoología Invertebrados; Argentina.
Fil: Rumi Macchi Zubiaurre, Alejandra. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (La Plata). División de Zoología Invertebrados; Argentina.
Fil: Strong, Ellen E. National Museum of Natural History. Smithsonian Institution; Estados Unidos.
Fil: Peso, Juana Guadalupe. Universidad Nacional de Misiones. Facultad de Ciencias Exactas, Químicas y Naturales. Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.
Fil: Peso, Juana Guadalupe. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (Nordeste). Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.
Highly oxygenated freshwater habitats in the High Paraná River (Argentina–Paraguay) were home to highly endemic snails of the genus Aylacostoma, which face extinction owing to the impoundment of the Yacyretá Reservoir in the 1990s. Two species, A. chloroticum and A. brunneum, are currently included in an ongoing ex situ conservation programme, whereas A. guaraniticum and A. stigmaticum are presumed extinct. Consequently, the validity and affinities of the latter two have remained enigmatic. Here, we provide the first molecular data on the extinct A. stigmaticum by means of historical DNA analysis. We describe patterns of molecular evolution based on partial sequences of the mitochondrial 12S ribosomal RNA gene from the extinct species and from those being bred within the ex situ programme. We further use this gene to derive a secondary structure model, to examine the specific status of A. stigmaticum and to explore the evolutionary history of these snails. The secondary structure model based on A. stigmaticum revealed that most polymorphic sites are located in unpaired regions. Our results support the view that the mitochondrial 12S region is an efficient marker for the discrimination of species, and the extinct A. stigmaticum is recognized here as a distinct evolutionary genetic species. Molecular phylogenetic analyses revealed a sister group relationship between A. chloroticum and A. brunneum, and estimated divergence times suggest that diversification of Aylacostoma in the High Paraná River might have started in the late Miocene via intra-basin speciation due to a past marine transgression. Finally, our findings reveal that DNA may be obtained from dried specimens at least 80 years after their collection, and confirms the feasibility of extracting historical DNA from museum collections for elucidating evolutionary patterns and processes in gastropods.
Materia
12s Rrna Gene
Abgd
Aylacostoma
High Parana River
K/Theta Method
Secondary structure
Thiaridae
Nivel de accesibilidad
acceso abierto
Condiciones de uso
Atribución-NoComercial-CompartirIgual 4.0 Internacional
Repositorio
Repositorio Institucional Digital de la Universidad Nacional de Misiones (UNaM)
Institución
Universidad Nacional de Misiones
OAI Identificador
oai:rid.unam.edu.ar:20.500.12219/4423

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repository_id_str
network_name_str Repositorio Institucional Digital de la Universidad Nacional de Misiones (UNaM)
spelling Insights into the evolutionary history of an extinct South American freshwater snail based on historical DNAVogler, Roberto EugenioBeltramino, Ariel AnibalStrong, Ellen E.Rumi Macchi Zubiaurre, AlejandraPeso, Juana Guadalupe12s Rrna GeneAbgdAylacostomaHigh Parana RiverK/Theta MethodSecondary structureThiaridaeFil: Vogler, Roberto Eugenio. Universidad Nacional de Misiones. Facultad de Ciencias Exactas, Químicas y Naturales. Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.Fil: Vogler, Roberto Eugenio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (Nordeste). Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.Fil: Vogler, Roberto Eugenio. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo. División de Zoología Invertebrados; Argentina.Fil: Vogler, Roberto Eugenio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (La Plata). División de Zoología Invertebrados; Argentina.Fil: Beltramino, Ariel Anibal. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo. División de Zoología Invertebrados; Argentina.Fil: Beltramino, Ariel Anibal. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (La Plata). División de Zoología Invertebrados; Argentina.Fil: Beltramino, Ariel Anibal. Universidad Nacional de Misiones. Facultad de Ciencias Exactas, Químicas y Naturales. Departamento de Biología; Argentina.Fil: Rumi Macchi Zubiaurre, Alejandra. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo. División de Zoología Invertebrados; Argentina.Fil: Rumi Macchi Zubiaurre, Alejandra. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (La Plata). División de Zoología Invertebrados; Argentina.Fil: Strong, Ellen E. National Museum of Natural History. Smithsonian Institution; Estados Unidos.Fil: Peso, Juana Guadalupe. Universidad Nacional de Misiones. Facultad de Ciencias Exactas, Químicas y Naturales. Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.Fil: Peso, Juana Guadalupe. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (Nordeste). Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.Highly oxygenated freshwater habitats in the High Paraná River (Argentina–Paraguay) were home to highly endemic snails of the genus Aylacostoma, which face extinction owing to the impoundment of the Yacyretá Reservoir in the 1990s. Two species, A. chloroticum and A. brunneum, are currently included in an ongoing ex situ conservation programme, whereas A. guaraniticum and A. stigmaticum are presumed extinct. Consequently, the validity and affinities of the latter two have remained enigmatic. Here, we provide the first molecular data on the extinct A. stigmaticum by means of historical DNA analysis. We describe patterns of molecular evolution based on partial sequences of the mitochondrial 12S ribosomal RNA gene from the extinct species and from those being bred within the ex situ programme. We further use this gene to derive a secondary structure model, to examine the specific status of A. stigmaticum and to explore the evolutionary history of these snails. The secondary structure model based on A. stigmaticum revealed that most polymorphic sites are located in unpaired regions. Our results support the view that the mitochondrial 12S region is an efficient marker for the discrimination of species, and the extinct A. stigmaticum is recognized here as a distinct evolutionary genetic species. Molecular phylogenetic analyses revealed a sister group relationship between A. chloroticum and A. brunneum, and estimated divergence times suggest that diversification of Aylacostoma in the High Paraná River might have started in the late Miocene via intra-basin speciation due to a past marine transgression. Finally, our findings reveal that DNA may be obtained from dried specimens at least 80 years after their collection, and confirms the feasibility of extracting historical DNA from museum collections for elucidating evolutionary patterns and processes in gastropods.Public Library of Science2016-12-29info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdf1.773 MBhttps://hdl.handle.net/20.500.12219/4423enginfo:eu-repo/semantics/altIdentifier/urn/https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0169191info:eu-repo/semantics/openAccessAtribución-NoComercial-CompartirIgual 4.0 Internacionalhttp://creativecommons.org/licenses/by-nc-sa/4.0/reponame:Repositorio Institucional Digital de la Universidad Nacional de Misiones (UNaM)instname:Universidad Nacional de Misiones2025-09-29T15:01:56Zoai:rid.unam.edu.ar:20.500.12219/4423instacron:UNAMInstitucionalhttps://rid.unam.edu.ar/Universidad públicahttps://www.unam.edu.ar/https://rid.unam.edu.ar/oai/rsnrdArgentinaopendoar:2025-09-29 15:01:57.271Repositorio Institucional Digital de la Universidad Nacional de Misiones (UNaM) - Universidad Nacional de Misionesfalse
dc.title.none.fl_str_mv Insights into the evolutionary history of an extinct South American freshwater snail based on historical DNA
title Insights into the evolutionary history of an extinct South American freshwater snail based on historical DNA
spellingShingle Insights into the evolutionary history of an extinct South American freshwater snail based on historical DNA
Vogler, Roberto Eugenio
12s Rrna Gene
Abgd
Aylacostoma
High Parana River
K/Theta Method
Secondary structure
Thiaridae
title_short Insights into the evolutionary history of an extinct South American freshwater snail based on historical DNA
title_full Insights into the evolutionary history of an extinct South American freshwater snail based on historical DNA
title_fullStr Insights into the evolutionary history of an extinct South American freshwater snail based on historical DNA
title_full_unstemmed Insights into the evolutionary history of an extinct South American freshwater snail based on historical DNA
title_sort Insights into the evolutionary history of an extinct South American freshwater snail based on historical DNA
dc.creator.none.fl_str_mv Vogler, Roberto Eugenio
Beltramino, Ariel Anibal
Strong, Ellen E.
Rumi Macchi Zubiaurre, Alejandra
Peso, Juana Guadalupe
author Vogler, Roberto Eugenio
author_facet Vogler, Roberto Eugenio
Beltramino, Ariel Anibal
Strong, Ellen E.
Rumi Macchi Zubiaurre, Alejandra
Peso, Juana Guadalupe
author_role author
author2 Beltramino, Ariel Anibal
Strong, Ellen E.
Rumi Macchi Zubiaurre, Alejandra
Peso, Juana Guadalupe
author2_role author
author
author
author
dc.subject.none.fl_str_mv 12s Rrna Gene
Abgd
Aylacostoma
High Parana River
K/Theta Method
Secondary structure
Thiaridae
topic 12s Rrna Gene
Abgd
Aylacostoma
High Parana River
K/Theta Method
Secondary structure
Thiaridae
dc.description.none.fl_txt_mv Fil: Vogler, Roberto Eugenio. Universidad Nacional de Misiones. Facultad de Ciencias Exactas, Químicas y Naturales. Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.
Fil: Vogler, Roberto Eugenio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (Nordeste). Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.
Fil: Vogler, Roberto Eugenio. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo. División de Zoología Invertebrados; Argentina.
Fil: Vogler, Roberto Eugenio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (La Plata). División de Zoología Invertebrados; Argentina.
Fil: Beltramino, Ariel Anibal. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo. División de Zoología Invertebrados; Argentina.
Fil: Beltramino, Ariel Anibal. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (La Plata). División de Zoología Invertebrados; Argentina.
Fil: Beltramino, Ariel Anibal. Universidad Nacional de Misiones. Facultad de Ciencias Exactas, Químicas y Naturales. Departamento de Biología; Argentina.
Fil: Rumi Macchi Zubiaurre, Alejandra. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo. División de Zoología Invertebrados; Argentina.
Fil: Rumi Macchi Zubiaurre, Alejandra. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (La Plata). División de Zoología Invertebrados; Argentina.
Fil: Strong, Ellen E. National Museum of Natural History. Smithsonian Institution; Estados Unidos.
Fil: Peso, Juana Guadalupe. Universidad Nacional de Misiones. Facultad de Ciencias Exactas, Químicas y Naturales. Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.
Fil: Peso, Juana Guadalupe. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico (Nordeste). Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.
Highly oxygenated freshwater habitats in the High Paraná River (Argentina–Paraguay) were home to highly endemic snails of the genus Aylacostoma, which face extinction owing to the impoundment of the Yacyretá Reservoir in the 1990s. Two species, A. chloroticum and A. brunneum, are currently included in an ongoing ex situ conservation programme, whereas A. guaraniticum and A. stigmaticum are presumed extinct. Consequently, the validity and affinities of the latter two have remained enigmatic. Here, we provide the first molecular data on the extinct A. stigmaticum by means of historical DNA analysis. We describe patterns of molecular evolution based on partial sequences of the mitochondrial 12S ribosomal RNA gene from the extinct species and from those being bred within the ex situ programme. We further use this gene to derive a secondary structure model, to examine the specific status of A. stigmaticum and to explore the evolutionary history of these snails. The secondary structure model based on A. stigmaticum revealed that most polymorphic sites are located in unpaired regions. Our results support the view that the mitochondrial 12S region is an efficient marker for the discrimination of species, and the extinct A. stigmaticum is recognized here as a distinct evolutionary genetic species. Molecular phylogenetic analyses revealed a sister group relationship between A. chloroticum and A. brunneum, and estimated divergence times suggest that diversification of Aylacostoma in the High Paraná River might have started in the late Miocene via intra-basin speciation due to a past marine transgression. Finally, our findings reveal that DNA may be obtained from dried specimens at least 80 years after their collection, and confirms the feasibility of extracting historical DNA from museum collections for elucidating evolutionary patterns and processes in gastropods.
description Fil: Vogler, Roberto Eugenio. Universidad Nacional de Misiones. Facultad de Ciencias Exactas, Químicas y Naturales. Instituto de Biología Subtropical. Instituto de Biología Subtropical. Nodo Posadas; Argentina.
publishDate 2016
dc.date.none.fl_str_mv 2016-12-29
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://hdl.handle.net/20.500.12219/4423
url https://hdl.handle.net/20.500.12219/4423
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/urn/https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0169191
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
Atribución-NoComercial-CompartirIgual 4.0 Internacional
http://creativecommons.org/licenses/by-nc-sa/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv Atribución-NoComercial-CompartirIgual 4.0 Internacional
http://creativecommons.org/licenses/by-nc-sa/4.0/
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1.773 MB
dc.publisher.none.fl_str_mv Public Library of Science
publisher.none.fl_str_mv Public Library of Science
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