Mapping QTL for spike fertility and related traits in two doubled haploid wheat (Triticum aestivum L.) populations
- Autores
- Pretini, Nicole; Vanzetti, Leonardo Sebastian; Terrile, Ignacio Ismael; Donaire, Guillermo Manuel; Gonzalez, Fernanda Gabriela
- Año de publicación
- 2021
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Background: In breeding programs, the selection of cultivars with the highest yield potential consisted in the selection of the yield per se, which resulted in cultivars with higher grains per spike (GN) and occasionally increased grain weight (GW) (main numerical components of the yield). In this study, quantitative trait loci (QTL) for GW, GN and spike fertility traits related to GN determination were mapped using two doubled haploid (DH) populations (Baguette Premium 11 × BioINTA 2002 and Baguette 19 × BioINTA 2002). Results: In total 305 QTL were identified for 14 traits, out of which 12 QTL were identified in more than three environments and explained more than 10% of the phenotypic variation in at least one environment. Eight hotspot regions were detected on chromosomes 1A, 2B, 3A, 5A, 5B, 7A and 7B in which at least two major and stable QTL sheared confidence intervals. QTL on two of these regions (R5A.1 and R5A.2) have previously been described, but the other six regions are novel. Conclusions: Based on the pleiotropic analysis within a robust physiological model we conclude that two hotspot genomic regions (R5A.1 and R5A.2) together with the QGW.perg-6B are of high relevance to be used in marker assisted selection in order to improve the spike yield potential. All the QTL identified for the spike related traits are the first step to search for their candidate genes, which will allow their better manipulation in the future.
EEA Marcos Juárez
Fil: Pretini, Nicole. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; Argentina
Fil: Pretini, Nicole. Universidad Nacional del Noroeste de la Provincia de Buenos Aires (UNNOBA). Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; Argentina.
Fil: Vanzetti, Leonardo Sebastian. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Marcos Juárez; Argentina
Fil: Vanzetti, Leonardo Sebastian. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Terrile, Ignacio Ismael. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Trigo; Argentina
Fil: Donaire, Guillermo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Marcos Juarez; Argentina.
Fil: González, Fernanda Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; Argentina.
Fil: González, Fernanda Gabriela. Universidad Nacional del Noroeste de la Provincia de Buenos Aires (UNNOBA). Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; Argentina
Fil: González, Fernanda Gabriela. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino; Argentina. - Fuente
- BMC Plant Biology 21 : Article number: 353 (2021)
- Materia
-
Trigo
Triticum aestivum
Loci de Rasgos Cuantitativos
Haploidia
Wheat
Quantitative Trait Loci
Haploidy
LRC (loci de rasgos cuantitativos)
QTL (quantitative trait loci) - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- http://creativecommons.org/licenses/by-nc-sa/4.0/
- Repositorio
- Institución
- Instituto Nacional de Tecnología Agropecuaria
- OAI Identificador
- oai:localhost:20.500.12123/9903
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Mapping QTL for spike fertility and related traits in two doubled haploid wheat (Triticum aestivum L.) populationsPretini, NicoleVanzetti, Leonardo SebastianTerrile, Ignacio IsmaelDonaire, Guillermo ManuelGonzalez, Fernanda GabrielaTrigoTriticum aestivumLoci de Rasgos CuantitativosHaploidiaWheatQuantitative Trait LociHaploidyLRC (loci de rasgos cuantitativos)QTL (quantitative trait loci)Background: In breeding programs, the selection of cultivars with the highest yield potential consisted in the selection of the yield per se, which resulted in cultivars with higher grains per spike (GN) and occasionally increased grain weight (GW) (main numerical components of the yield). In this study, quantitative trait loci (QTL) for GW, GN and spike fertility traits related to GN determination were mapped using two doubled haploid (DH) populations (Baguette Premium 11 × BioINTA 2002 and Baguette 19 × BioINTA 2002). Results: In total 305 QTL were identified for 14 traits, out of which 12 QTL were identified in more than three environments and explained more than 10% of the phenotypic variation in at least one environment. Eight hotspot regions were detected on chromosomes 1A, 2B, 3A, 5A, 5B, 7A and 7B in which at least two major and stable QTL sheared confidence intervals. QTL on two of these regions (R5A.1 and R5A.2) have previously been described, but the other six regions are novel. Conclusions: Based on the pleiotropic analysis within a robust physiological model we conclude that two hotspot genomic regions (R5A.1 and R5A.2) together with the QGW.perg-6B are of high relevance to be used in marker assisted selection in order to improve the spike yield potential. All the QTL identified for the spike related traits are the first step to search for their candidate genes, which will allow their better manipulation in the future.EEA Marcos JuárezFil: Pretini, Nicole. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; ArgentinaFil: Pretini, Nicole. Universidad Nacional del Noroeste de la Provincia de Buenos Aires (UNNOBA). Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; Argentina.Fil: Vanzetti, Leonardo Sebastian. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Marcos Juárez; ArgentinaFil: Vanzetti, Leonardo Sebastian. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Terrile, Ignacio Ismael. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Trigo; ArgentinaFil: Donaire, Guillermo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Marcos Juarez; Argentina.Fil: González, Fernanda Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; Argentina.Fil: González, Fernanda Gabriela. Universidad Nacional del Noroeste de la Provincia de Buenos Aires (UNNOBA). Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; ArgentinaFil: González, Fernanda Gabriela. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino; Argentina.BMC2021-07-28T11:34:01Z2021-07-28T11:34:01Z2021-07info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://hdl.handle.net/20.500.12123/9903https://bmcplantbiol.biomedcentral.com/articles/10.1186/s12870-021-03061-y1471-2229https://doi.org/10.1186/s12870-021-03061-yBMC Plant Biology 21 : Article number: 353 (2021)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repograntAgreement/INTA/PNCYO-1127042/AR./Bases ecofisiológicas para el mejoramiento genético y la calidad diferenciada de cereales y oleaginosas.info:eu-repograntAgreement/INTA/2019-PE-E6-I126-001/2019-PE-E6-I126-001/AR./Mejoramiento genético de trigo pan (Triticum aestivum L.) y trigo candeal (Triticum turgidum ssp. durum Desf.)info:eu-repograntAgreement/INTA/2019-PE-E6-I114-001/2019-PE-E6-I114-001/AR./Caracterización de la diversidad genética de plantas, animales y microorganismos mediante herramientas de genómica aplicada.info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)2025-09-04T09:48:59Zoai:localhost:20.500.12123/9903instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-09-04 09:48:59.55INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse |
dc.title.none.fl_str_mv |
Mapping QTL for spike fertility and related traits in two doubled haploid wheat (Triticum aestivum L.) populations |
title |
Mapping QTL for spike fertility and related traits in two doubled haploid wheat (Triticum aestivum L.) populations |
spellingShingle |
Mapping QTL for spike fertility and related traits in two doubled haploid wheat (Triticum aestivum L.) populations Pretini, Nicole Trigo Triticum aestivum Loci de Rasgos Cuantitativos Haploidia Wheat Quantitative Trait Loci Haploidy LRC (loci de rasgos cuantitativos) QTL (quantitative trait loci) |
title_short |
Mapping QTL for spike fertility and related traits in two doubled haploid wheat (Triticum aestivum L.) populations |
title_full |
Mapping QTL for spike fertility and related traits in two doubled haploid wheat (Triticum aestivum L.) populations |
title_fullStr |
Mapping QTL for spike fertility and related traits in two doubled haploid wheat (Triticum aestivum L.) populations |
title_full_unstemmed |
Mapping QTL for spike fertility and related traits in two doubled haploid wheat (Triticum aestivum L.) populations |
title_sort |
Mapping QTL for spike fertility and related traits in two doubled haploid wheat (Triticum aestivum L.) populations |
dc.creator.none.fl_str_mv |
Pretini, Nicole Vanzetti, Leonardo Sebastian Terrile, Ignacio Ismael Donaire, Guillermo Manuel Gonzalez, Fernanda Gabriela |
author |
Pretini, Nicole |
author_facet |
Pretini, Nicole Vanzetti, Leonardo Sebastian Terrile, Ignacio Ismael Donaire, Guillermo Manuel Gonzalez, Fernanda Gabriela |
author_role |
author |
author2 |
Vanzetti, Leonardo Sebastian Terrile, Ignacio Ismael Donaire, Guillermo Manuel Gonzalez, Fernanda Gabriela |
author2_role |
author author author author |
dc.subject.none.fl_str_mv |
Trigo Triticum aestivum Loci de Rasgos Cuantitativos Haploidia Wheat Quantitative Trait Loci Haploidy LRC (loci de rasgos cuantitativos) QTL (quantitative trait loci) |
topic |
Trigo Triticum aestivum Loci de Rasgos Cuantitativos Haploidia Wheat Quantitative Trait Loci Haploidy LRC (loci de rasgos cuantitativos) QTL (quantitative trait loci) |
dc.description.none.fl_txt_mv |
Background: In breeding programs, the selection of cultivars with the highest yield potential consisted in the selection of the yield per se, which resulted in cultivars with higher grains per spike (GN) and occasionally increased grain weight (GW) (main numerical components of the yield). In this study, quantitative trait loci (QTL) for GW, GN and spike fertility traits related to GN determination were mapped using two doubled haploid (DH) populations (Baguette Premium 11 × BioINTA 2002 and Baguette 19 × BioINTA 2002). Results: In total 305 QTL were identified for 14 traits, out of which 12 QTL were identified in more than three environments and explained more than 10% of the phenotypic variation in at least one environment. Eight hotspot regions were detected on chromosomes 1A, 2B, 3A, 5A, 5B, 7A and 7B in which at least two major and stable QTL sheared confidence intervals. QTL on two of these regions (R5A.1 and R5A.2) have previously been described, but the other six regions are novel. Conclusions: Based on the pleiotropic analysis within a robust physiological model we conclude that two hotspot genomic regions (R5A.1 and R5A.2) together with the QGW.perg-6B are of high relevance to be used in marker assisted selection in order to improve the spike yield potential. All the QTL identified for the spike related traits are the first step to search for their candidate genes, which will allow their better manipulation in the future. EEA Marcos Juárez Fil: Pretini, Nicole. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; Argentina Fil: Pretini, Nicole. Universidad Nacional del Noroeste de la Provincia de Buenos Aires (UNNOBA). Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; Argentina. Fil: Vanzetti, Leonardo Sebastian. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Marcos Juárez; Argentina Fil: Vanzetti, Leonardo Sebastian. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Terrile, Ignacio Ismael. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Trigo; Argentina Fil: Donaire, Guillermo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Marcos Juarez; Argentina. Fil: González, Fernanda Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; Argentina. Fil: González, Fernanda Gabriela. Universidad Nacional del Noroeste de la Provincia de Buenos Aires (UNNOBA). Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; Argentina Fil: González, Fernanda Gabriela. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino; Argentina. |
description |
Background: In breeding programs, the selection of cultivars with the highest yield potential consisted in the selection of the yield per se, which resulted in cultivars with higher grains per spike (GN) and occasionally increased grain weight (GW) (main numerical components of the yield). In this study, quantitative trait loci (QTL) for GW, GN and spike fertility traits related to GN determination were mapped using two doubled haploid (DH) populations (Baguette Premium 11 × BioINTA 2002 and Baguette 19 × BioINTA 2002). Results: In total 305 QTL were identified for 14 traits, out of which 12 QTL were identified in more than three environments and explained more than 10% of the phenotypic variation in at least one environment. Eight hotspot regions were detected on chromosomes 1A, 2B, 3A, 5A, 5B, 7A and 7B in which at least two major and stable QTL sheared confidence intervals. QTL on two of these regions (R5A.1 and R5A.2) have previously been described, but the other six regions are novel. Conclusions: Based on the pleiotropic analysis within a robust physiological model we conclude that two hotspot genomic regions (R5A.1 and R5A.2) together with the QGW.perg-6B are of high relevance to be used in marker assisted selection in order to improve the spike yield potential. All the QTL identified for the spike related traits are the first step to search for their candidate genes, which will allow their better manipulation in the future. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-07-28T11:34:01Z 2021-07-28T11:34:01Z 2021-07 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/20.500.12123/9903 https://bmcplantbiol.biomedcentral.com/articles/10.1186/s12870-021-03061-y 1471-2229 https://doi.org/10.1186/s12870-021-03061-y |
url |
http://hdl.handle.net/20.500.12123/9903 https://bmcplantbiol.biomedcentral.com/articles/10.1186/s12870-021-03061-y https://doi.org/10.1186/s12870-021-03061-y |
identifier_str_mv |
1471-2229 |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repograntAgreement/INTA/PNCYO-1127042/AR./Bases ecofisiológicas para el mejoramiento genético y la calidad diferenciada de cereales y oleaginosas. info:eu-repograntAgreement/INTA/2019-PE-E6-I126-001/2019-PE-E6-I126-001/AR./Mejoramiento genético de trigo pan (Triticum aestivum L.) y trigo candeal (Triticum turgidum ssp. durum Desf.) info:eu-repograntAgreement/INTA/2019-PE-E6-I114-001/2019-PE-E6-I114-001/AR./Caracterización de la diversidad genética de plantas, animales y microorganismos mediante herramientas de genómica aplicada. |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by-nc-sa/4.0/ Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by-nc-sa/4.0/ Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
BMC |
publisher.none.fl_str_mv |
BMC |
dc.source.none.fl_str_mv |
BMC Plant Biology 21 : Article number: 353 (2021) reponame:INTA Digital (INTA) instname:Instituto Nacional de Tecnología Agropecuaria |
reponame_str |
INTA Digital (INTA) |
collection |
INTA Digital (INTA) |
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Instituto Nacional de Tecnología Agropecuaria |
repository.name.fl_str_mv |
INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria |
repository.mail.fl_str_mv |
tripaldi.nicolas@inta.gob.ar |
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