Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urine
- Autores
- Lodh, Nilanjan; Caro, Reynaldo; Sofer, Shterna; Scott, Alan; Krolewiecki, Alejandro Javier; Shiff, Clive
- Año de publicación
- 2016
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Detecting infections of Strongyloides stercoralis is arduous and has low sensitivity. Clinically this is a major problem because chronic infections may disseminate in the host and lead to a life threatening condition.Epidemiologically, S. stercoralis is often missed in surveys as it is difficult to identify by standard stool examination procedures. We present, for the first time, evidence that the infection can be detected in filtered urine samples collected and processed in the field and subsequently assayed for the presence of parasite DNA. Urine specimens (∼40 mL) were collected from 125 test and control individuals living in rural and peri-urban regions of Northern Argentina. From the same individuals, fresh stool specimens were processed using three different copropological methods. Urine specimens were filtered in the field through a 12.5 cm Whatman No. 3 filter. The filters were dried and packed individually in sealable plastic bags with desiccant and shipped to a laboratory where DNA was recovered from the filter and PCRamplified with primers specific to a dispersed repetitive sequence. Prevalence of S. stercoralis infectionby stool culture and direct examination was 35/125 (28%), In contrast, PCR-based detection of parasitespecific trans-renal DNA in urine indicated that 56/125 (44.8%) carried the parasite. Of the patients that tested positive for urine-based parasite DNA, approximately half also tested positive in their stool specimens. There were 6.4% of cases where parasite larvae were seen in the stool but no DNA was amplified from the urine. As proof of principle, DNA amplification from urine residue reveals significantly more cases of S. stercoralis infection than the current standard stool examination techniques. Additional work is required to establish the relative utility, sensitivity and specificity of urine-based analysis compared to parasitological and nucleic acid detection from stool for clinical and epidemiological detection for S.stercoralis infection.
Fil: Lodh, Nilanjan. Marquette University; Estados Unidos
Fil: Caro, Reynaldo. Universidad Nacional de Salta. Sede Regional Orán. Instituto de Investigación de Enfermedades Tropicales; Argentina
Fil: Sofer, Shterna. Johns Hopkins Bloomberg School of Public Health; Estados Unidos
Fil: Scott, Alan. Johns Hopkins Bloomberg School of Public Health; Estados Unidos
Fil: Krolewiecki, Alejandro Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Salta. Instituto de Patología Experimental. Universidad Nacional de Salta. Facultad de Ciencias de la Salud. Instituto de Patología Experimental; Argentina. Universidad Nacional de Salta. Sede Regional Orán. Instituto de Investigación de Enfermedades Tropicales; Argentina
Fil: Shiff, Clive. Johns Hopkins Bloomberg School of Public Health; Estados Unidos - Materia
-
STRONGYLOIDES STERCORALIS
DIAGNOSTICS TEST
DNA DETECTION
URINE SPECIMEN
GASTRO-INTESTINAL PARASITE - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-nd/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/29934
Ver los metadatos del registro completo
id |
CONICETDig_837d7bc9fc5c229c752cce21ddd17fde |
---|---|
oai_identifier_str |
oai:ri.conicet.gov.ar:11336/29934 |
network_acronym_str |
CONICETDig |
repository_id_str |
3498 |
network_name_str |
CONICET Digital (CONICET) |
spelling |
Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urineLodh, NilanjanCaro, ReynaldoSofer, ShternaScott, AlanKrolewiecki, Alejandro JavierShiff, CliveSTRONGYLOIDES STERCORALISDIAGNOSTICS TESTDNA DETECTIONURINE SPECIMENGASTRO-INTESTINAL PARASITEhttps://purl.org/becyt/ford/3.3https://purl.org/becyt/ford/3Detecting infections of Strongyloides stercoralis is arduous and has low sensitivity. Clinically this is a major problem because chronic infections may disseminate in the host and lead to a life threatening condition.Epidemiologically, S. stercoralis is often missed in surveys as it is difficult to identify by standard stool examination procedures. We present, for the first time, evidence that the infection can be detected in filtered urine samples collected and processed in the field and subsequently assayed for the presence of parasite DNA. Urine specimens (∼40 mL) were collected from 125 test and control individuals living in rural and peri-urban regions of Northern Argentina. From the same individuals, fresh stool specimens were processed using three different copropological methods. Urine specimens were filtered in the field through a 12.5 cm Whatman No. 3 filter. The filters were dried and packed individually in sealable plastic bags with desiccant and shipped to a laboratory where DNA was recovered from the filter and PCRamplified with primers specific to a dispersed repetitive sequence. Prevalence of S. stercoralis infectionby stool culture and direct examination was 35/125 (28%), In contrast, PCR-based detection of parasitespecific trans-renal DNA in urine indicated that 56/125 (44.8%) carried the parasite. Of the patients that tested positive for urine-based parasite DNA, approximately half also tested positive in their stool specimens. There were 6.4% of cases where parasite larvae were seen in the stool but no DNA was amplified from the urine. As proof of principle, DNA amplification from urine residue reveals significantly more cases of S. stercoralis infection than the current standard stool examination techniques. Additional work is required to establish the relative utility, sensitivity and specificity of urine-based analysis compared to parasitological and nucleic acid detection from stool for clinical and epidemiological detection for S.stercoralis infection.Fil: Lodh, Nilanjan. Marquette University; Estados UnidosFil: Caro, Reynaldo. Universidad Nacional de Salta. Sede Regional Orán. Instituto de Investigación de Enfermedades Tropicales; ArgentinaFil: Sofer, Shterna. Johns Hopkins Bloomberg School of Public Health; Estados UnidosFil: Scott, Alan. Johns Hopkins Bloomberg School of Public Health; Estados UnidosFil: Krolewiecki, Alejandro Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Salta. Instituto de Patología Experimental. Universidad Nacional de Salta. Facultad de Ciencias de la Salud. Instituto de Patología Experimental; Argentina. Universidad Nacional de Salta. Sede Regional Orán. Instituto de Investigación de Enfermedades Tropicales; ArgentinaFil: Shiff, Clive. Johns Hopkins Bloomberg School of Public Health; Estados UnidosElsevier Science2016-07info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/29934Lodh, Nilanjan; Caro, Reynaldo; Sofer, Shterna; Scott, Alan; Krolewiecki, Alejandro Javier; et al.; Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urine; Elsevier Science; Acta Tropica; 163; 7-2016; 9-130001-706XCONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1016/j.actatropica.2016.07.014info:eu-repo/semantics/altIdentifier/url/http://www.sciencedirect.com/science/article/pii/S0020751912001701info:eu-repo/semantics/altIdentifier/url/https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5117362/info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:47:15Zoai:ri.conicet.gov.ar:11336/29934instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:47:15.453CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urine |
title |
Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urine |
spellingShingle |
Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urine Lodh, Nilanjan STRONGYLOIDES STERCORALIS DIAGNOSTICS TEST DNA DETECTION URINE SPECIMEN GASTRO-INTESTINAL PARASITE |
title_short |
Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urine |
title_full |
Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urine |
title_fullStr |
Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urine |
title_full_unstemmed |
Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urine |
title_sort |
Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urine |
dc.creator.none.fl_str_mv |
Lodh, Nilanjan Caro, Reynaldo Sofer, Shterna Scott, Alan Krolewiecki, Alejandro Javier Shiff, Clive |
author |
Lodh, Nilanjan |
author_facet |
Lodh, Nilanjan Caro, Reynaldo Sofer, Shterna Scott, Alan Krolewiecki, Alejandro Javier Shiff, Clive |
author_role |
author |
author2 |
Caro, Reynaldo Sofer, Shterna Scott, Alan Krolewiecki, Alejandro Javier Shiff, Clive |
author2_role |
author author author author author |
dc.subject.none.fl_str_mv |
STRONGYLOIDES STERCORALIS DIAGNOSTICS TEST DNA DETECTION URINE SPECIMEN GASTRO-INTESTINAL PARASITE |
topic |
STRONGYLOIDES STERCORALIS DIAGNOSTICS TEST DNA DETECTION URINE SPECIMEN GASTRO-INTESTINAL PARASITE |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/3.3 https://purl.org/becyt/ford/3 |
dc.description.none.fl_txt_mv |
Detecting infections of Strongyloides stercoralis is arduous and has low sensitivity. Clinically this is a major problem because chronic infections may disseminate in the host and lead to a life threatening condition.Epidemiologically, S. stercoralis is often missed in surveys as it is difficult to identify by standard stool examination procedures. We present, for the first time, evidence that the infection can be detected in filtered urine samples collected and processed in the field and subsequently assayed for the presence of parasite DNA. Urine specimens (∼40 mL) were collected from 125 test and control individuals living in rural and peri-urban regions of Northern Argentina. From the same individuals, fresh stool specimens were processed using three different copropological methods. Urine specimens were filtered in the field through a 12.5 cm Whatman No. 3 filter. The filters were dried and packed individually in sealable plastic bags with desiccant and shipped to a laboratory where DNA was recovered from the filter and PCRamplified with primers specific to a dispersed repetitive sequence. Prevalence of S. stercoralis infectionby stool culture and direct examination was 35/125 (28%), In contrast, PCR-based detection of parasitespecific trans-renal DNA in urine indicated that 56/125 (44.8%) carried the parasite. Of the patients that tested positive for urine-based parasite DNA, approximately half also tested positive in their stool specimens. There were 6.4% of cases where parasite larvae were seen in the stool but no DNA was amplified from the urine. As proof of principle, DNA amplification from urine residue reveals significantly more cases of S. stercoralis infection than the current standard stool examination techniques. Additional work is required to establish the relative utility, sensitivity and specificity of urine-based analysis compared to parasitological and nucleic acid detection from stool for clinical and epidemiological detection for S.stercoralis infection. Fil: Lodh, Nilanjan. Marquette University; Estados Unidos Fil: Caro, Reynaldo. Universidad Nacional de Salta. Sede Regional Orán. Instituto de Investigación de Enfermedades Tropicales; Argentina Fil: Sofer, Shterna. Johns Hopkins Bloomberg School of Public Health; Estados Unidos Fil: Scott, Alan. Johns Hopkins Bloomberg School of Public Health; Estados Unidos Fil: Krolewiecki, Alejandro Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Salta. Instituto de Patología Experimental. Universidad Nacional de Salta. Facultad de Ciencias de la Salud. Instituto de Patología Experimental; Argentina. Universidad Nacional de Salta. Sede Regional Orán. Instituto de Investigación de Enfermedades Tropicales; Argentina Fil: Shiff, Clive. Johns Hopkins Bloomberg School of Public Health; Estados Unidos |
description |
Detecting infections of Strongyloides stercoralis is arduous and has low sensitivity. Clinically this is a major problem because chronic infections may disseminate in the host and lead to a life threatening condition.Epidemiologically, S. stercoralis is often missed in surveys as it is difficult to identify by standard stool examination procedures. We present, for the first time, evidence that the infection can be detected in filtered urine samples collected and processed in the field and subsequently assayed for the presence of parasite DNA. Urine specimens (∼40 mL) were collected from 125 test and control individuals living in rural and peri-urban regions of Northern Argentina. From the same individuals, fresh stool specimens were processed using three different copropological methods. Urine specimens were filtered in the field through a 12.5 cm Whatman No. 3 filter. The filters were dried and packed individually in sealable plastic bags with desiccant and shipped to a laboratory where DNA was recovered from the filter and PCRamplified with primers specific to a dispersed repetitive sequence. Prevalence of S. stercoralis infectionby stool culture and direct examination was 35/125 (28%), In contrast, PCR-based detection of parasitespecific trans-renal DNA in urine indicated that 56/125 (44.8%) carried the parasite. Of the patients that tested positive for urine-based parasite DNA, approximately half also tested positive in their stool specimens. There were 6.4% of cases where parasite larvae were seen in the stool but no DNA was amplified from the urine. As proof of principle, DNA amplification from urine residue reveals significantly more cases of S. stercoralis infection than the current standard stool examination techniques. Additional work is required to establish the relative utility, sensitivity and specificity of urine-based analysis compared to parasitological and nucleic acid detection from stool for clinical and epidemiological detection for S.stercoralis infection. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-07 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/29934 Lodh, Nilanjan; Caro, Reynaldo; Sofer, Shterna; Scott, Alan; Krolewiecki, Alejandro Javier; et al.; Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urine; Elsevier Science; Acta Tropica; 163; 7-2016; 9-13 0001-706X CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/29934 |
identifier_str_mv |
Lodh, Nilanjan; Caro, Reynaldo; Sofer, Shterna; Scott, Alan; Krolewiecki, Alejandro Javier; et al.; Diagnosis of Strongyloides stercoralis: Detection of parasite-derived DNA in urine; Elsevier Science; Acta Tropica; 163; 7-2016; 9-13 0001-706X CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/doi/10.1016/j.actatropica.2016.07.014 info:eu-repo/semantics/altIdentifier/url/http://www.sciencedirect.com/science/article/pii/S0020751912001701 info:eu-repo/semantics/altIdentifier/url/https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5117362/ |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-nd/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-nd/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier Science |
publisher.none.fl_str_mv |
Elsevier Science |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
reponame_str |
CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
_version_ |
1844614516025851904 |
score |
13.069144 |