Phylodynamic analysis of avian infectious bronchitis virus in South America

Autores
Marandino, Ana; Pereda, Ariel Julián; Tomás, Gonzalo; Hernández, Martín; Iraola, Gregorio; Craig, María Isabel; Hernández, Diego; Banda, Alejandro; Villegas, Pedro; Panzera, Yanina; Pérez, Ruben
Año de publicación
2015
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Infectious bronchitis virus (IBV) is a coronavirus of chickens that causes great economic losses to the global poultry industry. The present study focuses on South American IBVs and their genetic relationships with global strains. We obtained full-length sequences of the S1 coding region and N gene of IBV field isolates from Uruguay and Argentina, and performed Phylodynamic analysis to characterize the strains and estimate the time of the most recent common ancestor. We identified two major South American genotypes, which were here denoted South America I (SAI) and Asia/ South America II (A/SAII). The SAI genotype is an exclusive South American lineage that emerged in the 1960s. The A/SAII genotype may have emerged in Asia in approximately 1995 before being introduced into South America. Both SAI and A/SAII genotype strains clearly differ from the Massachusetts strains that are included in the vaccine formulations being used in most South American countries.
Fil: Marandino, Ana. Universidad de la República; Uruguay
Fil: Pereda, Ariel Julián. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Virología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Tomás, Gonzalo. Universidad de la República; Uruguay
Fil: Hernández, Martín. Universidad de la República; Uruguay
Fil: Iraola, Gregorio. Universidad de la República; Uruguay. Instituto Pasteur de Montevideo; Uruguay
Fil: Craig, María Isabel. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Virología; Argentina
Fil: Hernández, Diego. Universidad de la República; Uruguay
Fil: Banda, Alejandro. University Of Mississippi; Estados Unidos
Fil: Villegas, Pedro. University of Georgia; Estados Unidos
Fil: Panzera, Yanina. Universidad de la República; Uruguay
Fil: Pérez, Ruben. Universidad de la República; Uruguay
Materia
Phylodynamics
Avian
Bronchitis
South America
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/38688
Acceder
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network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Phylodynamic analysis of avian infectious bronchitis virus in South AmericaMarandino, AnaPereda, Ariel JuliánTomás, GonzaloHernández, MartínIraola, GregorioCraig, María IsabelHernández, DiegoBanda, AlejandroVillegas, PedroPanzera, YaninaPérez, RubenPhylodynamicsAvianBronchitisSouth Americahttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Infectious bronchitis virus (IBV) is a coronavirus of chickens that causes great economic losses to the global poultry industry. The present study focuses on South American IBVs and their genetic relationships with global strains. We obtained full-length sequences of the S1 coding region and N gene of IBV field isolates from Uruguay and Argentina, and performed Phylodynamic analysis to characterize the strains and estimate the time of the most recent common ancestor. We identified two major South American genotypes, which were here denoted South America I (SAI) and Asia/ South America II (A/SAII). The SAI genotype is an exclusive South American lineage that emerged in the 1960s. The A/SAII genotype may have emerged in Asia in approximately 1995 before being introduced into South America. Both SAI and A/SAII genotype strains clearly differ from the Massachusetts strains that are included in the vaccine formulations being used in most South American countries.Fil: Marandino, Ana. Universidad de la República; UruguayFil: Pereda, Ariel Julián. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Virología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Tomás, Gonzalo. Universidad de la República; UruguayFil: Hernández, Martín. Universidad de la República; UruguayFil: Iraola, Gregorio. Universidad de la República; Uruguay. Instituto Pasteur de Montevideo; UruguayFil: Craig, María Isabel. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Virología; ArgentinaFil: Hernández, Diego. Universidad de la República; UruguayFil: Banda, Alejandro. University Of Mississippi; Estados UnidosFil: Villegas, Pedro. University of Georgia; Estados UnidosFil: Panzera, Yanina. Universidad de la República; UruguayFil: Pérez, Ruben. Universidad de la República; UruguaySociety for General Microbiology2015-02info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/38688Marandino, Ana; Pereda, Ariel Julián; Tomás, Gonzalo; Hernández, Martín; Iraola, Gregorio; et al.; Phylodynamic analysis of avian infectious bronchitis virus in South America; Society for General Microbiology; Journal of General Virology; 96; 2-2015; 1340-13460022-1317CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1099/vir.0.000077info:eu-repo/semantics/altIdentifier/url/http://jgv.microbiologyresearch.org/content/journal/jgv/10.1099/vir.0.000077info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:19:18Zoai:ri.conicet.gov.ar:11336/38688instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:19:19.274CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Phylodynamic analysis of avian infectious bronchitis virus in South America
title Phylodynamic analysis of avian infectious bronchitis virus in South America
spellingShingle Phylodynamic analysis of avian infectious bronchitis virus in South America
Marandino, Ana
Phylodynamics
Avian
Bronchitis
South America
title_short Phylodynamic analysis of avian infectious bronchitis virus in South America
title_full Phylodynamic analysis of avian infectious bronchitis virus in South America
title_fullStr Phylodynamic analysis of avian infectious bronchitis virus in South America
title_full_unstemmed Phylodynamic analysis of avian infectious bronchitis virus in South America
title_sort Phylodynamic analysis of avian infectious bronchitis virus in South America
dc.creator.none.fl_str_mv Marandino, Ana
Pereda, Ariel Julián
Tomás, Gonzalo
Hernández, Martín
Iraola, Gregorio
Craig, María Isabel
Hernández, Diego
Banda, Alejandro
Villegas, Pedro
Panzera, Yanina
Pérez, Ruben
author Marandino, Ana
author_facet Marandino, Ana
Pereda, Ariel Julián
Tomás, Gonzalo
Hernández, Martín
Iraola, Gregorio
Craig, María Isabel
Hernández, Diego
Banda, Alejandro
Villegas, Pedro
Panzera, Yanina
Pérez, Ruben
author_role author
author2 Pereda, Ariel Julián
Tomás, Gonzalo
Hernández, Martín
Iraola, Gregorio
Craig, María Isabel
Hernández, Diego
Banda, Alejandro
Villegas, Pedro
Panzera, Yanina
Pérez, Ruben
author2_role author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Phylodynamics
Avian
Bronchitis
South America
topic Phylodynamics
Avian
Bronchitis
South America
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Infectious bronchitis virus (IBV) is a coronavirus of chickens that causes great economic losses to the global poultry industry. The present study focuses on South American IBVs and their genetic relationships with global strains. We obtained full-length sequences of the S1 coding region and N gene of IBV field isolates from Uruguay and Argentina, and performed Phylodynamic analysis to characterize the strains and estimate the time of the most recent common ancestor. We identified two major South American genotypes, which were here denoted South America I (SAI) and Asia/ South America II (A/SAII). The SAI genotype is an exclusive South American lineage that emerged in the 1960s. The A/SAII genotype may have emerged in Asia in approximately 1995 before being introduced into South America. Both SAI and A/SAII genotype strains clearly differ from the Massachusetts strains that are included in the vaccine formulations being used in most South American countries.
Fil: Marandino, Ana. Universidad de la República; Uruguay
Fil: Pereda, Ariel Julián. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Virología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Tomás, Gonzalo. Universidad de la República; Uruguay
Fil: Hernández, Martín. Universidad de la República; Uruguay
Fil: Iraola, Gregorio. Universidad de la República; Uruguay. Instituto Pasteur de Montevideo; Uruguay
Fil: Craig, María Isabel. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Virología; Argentina
Fil: Hernández, Diego. Universidad de la República; Uruguay
Fil: Banda, Alejandro. University Of Mississippi; Estados Unidos
Fil: Villegas, Pedro. University of Georgia; Estados Unidos
Fil: Panzera, Yanina. Universidad de la República; Uruguay
Fil: Pérez, Ruben. Universidad de la República; Uruguay
description Infectious bronchitis virus (IBV) is a coronavirus of chickens that causes great economic losses to the global poultry industry. The present study focuses on South American IBVs and their genetic relationships with global strains. We obtained full-length sequences of the S1 coding region and N gene of IBV field isolates from Uruguay and Argentina, and performed Phylodynamic analysis to characterize the strains and estimate the time of the most recent common ancestor. We identified two major South American genotypes, which were here denoted South America I (SAI) and Asia/ South America II (A/SAII). The SAI genotype is an exclusive South American lineage that emerged in the 1960s. The A/SAII genotype may have emerged in Asia in approximately 1995 before being introduced into South America. Both SAI and A/SAII genotype strains clearly differ from the Massachusetts strains that are included in the vaccine formulations being used in most South American countries.
publishDate 2015
dc.date.none.fl_str_mv 2015-02
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/38688
Marandino, Ana; Pereda, Ariel Julián; Tomás, Gonzalo; Hernández, Martín; Iraola, Gregorio; et al.; Phylodynamic analysis of avian infectious bronchitis virus in South America; Society for General Microbiology; Journal of General Virology; 96; 2-2015; 1340-1346
0022-1317
CONICET Digital
CONICET
url http://hdl.handle.net/11336/38688
identifier_str_mv Marandino, Ana; Pereda, Ariel Julián; Tomás, Gonzalo; Hernández, Martín; Iraola, Gregorio; et al.; Phylodynamic analysis of avian infectious bronchitis virus in South America; Society for General Microbiology; Journal of General Virology; 96; 2-2015; 1340-1346
0022-1317
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1099/vir.0.000077
info:eu-repo/semantics/altIdentifier/url/http://jgv.microbiologyresearch.org/content/journal/jgv/10.1099/vir.0.000077
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Society for General Microbiology
publisher.none.fl_str_mv Society for General Microbiology
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
_version_ 1844614163945488384
score 13.070432

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