Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry

Autores
Raimunda, Daniel Cesar; Khare, Tripti; Giometti, Carol; Vogt, Stefan; Argüello, José M.; Finney, Lydia
Año de publicación
2012
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Metals are critical and dynamic components of biochemistry. To understand their roles, we greatly need tools to identify the ligands that bind them within the complexity of natural systems. This work describes the development of methods that not only detect and distinguish metals, but also characterize the proteins that bind them. We describe an approach to expose, identify and quantify metalloproteins in complex mixtures by sequential non-denaturing 2D-gel electrophoresis (2D GE)/X-ray Fluorescence (XRF) and tandem mass spectrometry (MS/MS) in the same spot of a sample. We first apply the development of 2D GE/XRF to Shewanella oneidensis MR-1, a well-studied system, and verify our electrophoretic approach. Then, we identified a novel periplasmic zinc protein in Pseudomonas aeruginosa PAO1 through 2D GE/XRF followed by MS/MS. The identity and function of this protein was verified through a gene mutation experiment.
Fil: Raimunda, Daniel Cesar. Worcester Polytechnic Institute; Estados Unidos
Fil: Khare, Tripti. Argonne National Laboratory; Estados Unidos
Fil: Giometti, Carol. Argonne National Laboratory; Estados Unidos
Fil: Vogt, Stefan. Argonne National Laboratory; Estados Unidos
Fil: Argüello, José M.. Worcester Polytechnic Institute; Estados Unidos
Fil: Finney, Lydia. Argonne National Laboratory; Estados Unidos
Materia
Metalloproteins
X-ray
MS/MS
Fluorescence
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/198114

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spelling Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometryRaimunda, Daniel CesarKhare, TriptiGiometti, CarolVogt, StefanArgüello, José M.Finney, LydiaMetalloproteinsX-rayMS/MSFluorescencehttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Metals are critical and dynamic components of biochemistry. To understand their roles, we greatly need tools to identify the ligands that bind them within the complexity of natural systems. This work describes the development of methods that not only detect and distinguish metals, but also characterize the proteins that bind them. We describe an approach to expose, identify and quantify metalloproteins in complex mixtures by sequential non-denaturing 2D-gel electrophoresis (2D GE)/X-ray Fluorescence (XRF) and tandem mass spectrometry (MS/MS) in the same spot of a sample. We first apply the development of 2D GE/XRF to Shewanella oneidensis MR-1, a well-studied system, and verify our electrophoretic approach. Then, we identified a novel periplasmic zinc protein in Pseudomonas aeruginosa PAO1 through 2D GE/XRF followed by MS/MS. The identity and function of this protein was verified through a gene mutation experiment.Fil: Raimunda, Daniel Cesar. Worcester Polytechnic Institute; Estados UnidosFil: Khare, Tripti. Argonne National Laboratory; Estados UnidosFil: Giometti, Carol. Argonne National Laboratory; Estados UnidosFil: Vogt, Stefan. Argonne National Laboratory; Estados UnidosFil: Argüello, José M.. Worcester Polytechnic Institute; Estados UnidosFil: Finney, Lydia. Argonne National Laboratory; Estados UnidosRoyal Society of Chemistry2012-08info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/198114Raimunda, Daniel Cesar; Khare, Tripti; Giometti, Carol; Vogt, Stefan; Argüello, José M.; et al.; Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry; Royal Society of Chemistry; Metallomics; 4; 9; 8-2012; 921-9271756-59011756-591XCONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1039/c2mt20095cinfo:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/metallomics/article/4/9/921/6016121info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T10:04:31Zoai:ri.conicet.gov.ar:11336/198114instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 10:04:31.346CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry
title Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry
spellingShingle Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry
Raimunda, Daniel Cesar
Metalloproteins
X-ray
MS/MS
Fluorescence
title_short Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry
title_full Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry
title_fullStr Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry
title_full_unstemmed Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry
title_sort Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry
dc.creator.none.fl_str_mv Raimunda, Daniel Cesar
Khare, Tripti
Giometti, Carol
Vogt, Stefan
Argüello, José M.
Finney, Lydia
author Raimunda, Daniel Cesar
author_facet Raimunda, Daniel Cesar
Khare, Tripti
Giometti, Carol
Vogt, Stefan
Argüello, José M.
Finney, Lydia
author_role author
author2 Khare, Tripti
Giometti, Carol
Vogt, Stefan
Argüello, José M.
Finney, Lydia
author2_role author
author
author
author
author
dc.subject.none.fl_str_mv Metalloproteins
X-ray
MS/MS
Fluorescence
topic Metalloproteins
X-ray
MS/MS
Fluorescence
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Metals are critical and dynamic components of biochemistry. To understand their roles, we greatly need tools to identify the ligands that bind them within the complexity of natural systems. This work describes the development of methods that not only detect and distinguish metals, but also characterize the proteins that bind them. We describe an approach to expose, identify and quantify metalloproteins in complex mixtures by sequential non-denaturing 2D-gel electrophoresis (2D GE)/X-ray Fluorescence (XRF) and tandem mass spectrometry (MS/MS) in the same spot of a sample. We first apply the development of 2D GE/XRF to Shewanella oneidensis MR-1, a well-studied system, and verify our electrophoretic approach. Then, we identified a novel periplasmic zinc protein in Pseudomonas aeruginosa PAO1 through 2D GE/XRF followed by MS/MS. The identity and function of this protein was verified through a gene mutation experiment.
Fil: Raimunda, Daniel Cesar. Worcester Polytechnic Institute; Estados Unidos
Fil: Khare, Tripti. Argonne National Laboratory; Estados Unidos
Fil: Giometti, Carol. Argonne National Laboratory; Estados Unidos
Fil: Vogt, Stefan. Argonne National Laboratory; Estados Unidos
Fil: Argüello, José M.. Worcester Polytechnic Institute; Estados Unidos
Fil: Finney, Lydia. Argonne National Laboratory; Estados Unidos
description Metals are critical and dynamic components of biochemistry. To understand their roles, we greatly need tools to identify the ligands that bind them within the complexity of natural systems. This work describes the development of methods that not only detect and distinguish metals, but also characterize the proteins that bind them. We describe an approach to expose, identify and quantify metalloproteins in complex mixtures by sequential non-denaturing 2D-gel electrophoresis (2D GE)/X-ray Fluorescence (XRF) and tandem mass spectrometry (MS/MS) in the same spot of a sample. We first apply the development of 2D GE/XRF to Shewanella oneidensis MR-1, a well-studied system, and verify our electrophoretic approach. Then, we identified a novel periplasmic zinc protein in Pseudomonas aeruginosa PAO1 through 2D GE/XRF followed by MS/MS. The identity and function of this protein was verified through a gene mutation experiment.
publishDate 2012
dc.date.none.fl_str_mv 2012-08
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/198114
Raimunda, Daniel Cesar; Khare, Tripti; Giometti, Carol; Vogt, Stefan; Argüello, José M.; et al.; Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry; Royal Society of Chemistry; Metallomics; 4; 9; 8-2012; 921-927
1756-5901
1756-591X
CONICET Digital
CONICET
url http://hdl.handle.net/11336/198114
identifier_str_mv Raimunda, Daniel Cesar; Khare, Tripti; Giometti, Carol; Vogt, Stefan; Argüello, José M.; et al.; Identifying metalloproteins through X-ray fluorescence mapping and mass spectrometry; Royal Society of Chemistry; Metallomics; 4; 9; 8-2012; 921-927
1756-5901
1756-591X
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1039/c2mt20095c
info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/metallomics/article/4/9/921/6016121
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Royal Society of Chemistry
publisher.none.fl_str_mv Royal Society of Chemistry
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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