A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cycles
- Autores
- Caraballo, Diego Alfredo; Lema, Cristina; Novaro, Laura; Gury Dohmen, Federico; Russo, Susana; Beltrán, Fernando J.; Palacios, Gustavo; Cisterna, Daniel Marcelo
- Año de publicación
- 2021
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- The rabies virus (RABV) is characterized by a history dominated by host shifts within and among bats and carnivores. One of the main outcomes of long-term RABV maintenance in dogs was the establishment of variants in a wide variety of mesocarnivores. In this study, we present the most comprehensive phylogenetic and phylogeographic analysis, contributing to a better understanding of the origins, diversification, and the role of different host species in the evolution and diffusion of a dog-related variant endemic of South America. A total of 237 complete Nucleoprotein gene sequences were studied, corresponding to wild and domestic species, performing selection analyses, ancestral states reconstructions, and recombination analyses. This variant originated in Brazil and disseminated through Argentina and Paraguay, where a previously unknown lineage was found. A single host shift was identified in the phylogeny, from dog to the crab-eating fox (Cerdocyon thous) in the Northeast of Brazil. Although this process occurred in a background of purifying selection, there is evidence of adaptive evolution-or selection of sub-consensus sequences-in internal branches after the host shift. The interaction of domestic and wild cycles persisted after host switching, as revealed by spillover and putative recombination events.
Fil: Caraballo, Diego Alfredo. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Lema, Cristina. Dirección Nacional de Instituto de Investigación. Administración Nacional de Laboratorio E Instituto de Salud "Dr. C. G. Malbran". Departamento Virus; Argentina
Fil: Novaro, Laura. Ministerio de Agricultura, Ganadería, Pesca y Alimento. Servicio Nacional de Sanidad y Calidad Agroalimentaria; Argentina
Fil: Gury Dohmen, Federico. Gobierno de la Ciudad Autónoma de Buenos Aires. Ministerio de Salud. Instituto de Zoonosis Luis Pasteur; Argentina
Fil: Russo, Susana. Ministerio de Agricultura, Ganadería, Pesca y Alimento. Servicio Nacional de Sanidad y Calidad Agroalimentaria; Argentina
Fil: Beltrán, Fernando J.. Gobierno de la Ciudad Autónoma de Buenos Aires. Ministerio de Salud. Instituto de Zoonosis Luis Pasteur; Argentina
Fil: Palacios, Gustavo. Icahn School of Medicine at Mount Sinai; Estados Unidos
Fil: Cisterna, Daniel Marcelo. Dirección Nacional de Instituto de Investigación. Administración Nacional de Laboratorio E Instituto de Salud "Dr. C. G. Malbran". Departamento Virus; Argentina - Materia
-
DOG-RELATED
HOST SHIFT
NUCLEOPROTEIN
PHYLOGENY
RABIES
RECOMBINATION
SELECTION - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/182003
Ver los metadatos del registro completo
id |
CONICETDig_3545ab48d115ff1c20d74bca6ede2ccc |
---|---|
oai_identifier_str |
oai:ri.conicet.gov.ar:11336/182003 |
network_acronym_str |
CONICETDig |
repository_id_str |
3498 |
network_name_str |
CONICET Digital (CONICET) |
spelling |
A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cyclesCaraballo, Diego AlfredoLema, CristinaNovaro, LauraGury Dohmen, FedericoRusso, SusanaBeltrán, Fernando J.Palacios, GustavoCisterna, Daniel MarceloDOG-RELATEDHOST SHIFTNUCLEOPROTEINPHYLOGENYRABIESRECOMBINATIONSELECTIONhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1https://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1The rabies virus (RABV) is characterized by a history dominated by host shifts within and among bats and carnivores. One of the main outcomes of long-term RABV maintenance in dogs was the establishment of variants in a wide variety of mesocarnivores. In this study, we present the most comprehensive phylogenetic and phylogeographic analysis, contributing to a better understanding of the origins, diversification, and the role of different host species in the evolution and diffusion of a dog-related variant endemic of South America. A total of 237 complete Nucleoprotein gene sequences were studied, corresponding to wild and domestic species, performing selection analyses, ancestral states reconstructions, and recombination analyses. This variant originated in Brazil and disseminated through Argentina and Paraguay, where a previously unknown lineage was found. A single host shift was identified in the phylogeny, from dog to the crab-eating fox (Cerdocyon thous) in the Northeast of Brazil. Although this process occurred in a background of purifying selection, there is evidence of adaptive evolution-or selection of sub-consensus sequences-in internal branches after the host shift. The interaction of domestic and wild cycles persisted after host switching, as revealed by spillover and putative recombination events.Fil: Caraballo, Diego Alfredo. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; ArgentinaFil: Lema, Cristina. Dirección Nacional de Instituto de Investigación. Administración Nacional de Laboratorio E Instituto de Salud "Dr. C. G. Malbran". Departamento Virus; ArgentinaFil: Novaro, Laura. Ministerio de Agricultura, Ganadería, Pesca y Alimento. Servicio Nacional de Sanidad y Calidad Agroalimentaria; ArgentinaFil: Gury Dohmen, Federico. Gobierno de la Ciudad Autónoma de Buenos Aires. Ministerio de Salud. Instituto de Zoonosis Luis Pasteur; ArgentinaFil: Russo, Susana. Ministerio de Agricultura, Ganadería, Pesca y Alimento. Servicio Nacional de Sanidad y Calidad Agroalimentaria; ArgentinaFil: Beltrán, Fernando J.. Gobierno de la Ciudad Autónoma de Buenos Aires. Ministerio de Salud. Instituto de Zoonosis Luis Pasteur; ArgentinaFil: Palacios, Gustavo. Icahn School of Medicine at Mount Sinai; Estados UnidosFil: Cisterna, Daniel Marcelo. Dirección Nacional de Instituto de Investigación. Administración Nacional de Laboratorio E Instituto de Salud "Dr. C. G. Malbran". Departamento Virus; ArgentinaMDPI2021-12info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/182003Caraballo, Diego Alfredo; Lema, Cristina; Novaro, Laura; Gury Dohmen, Federico; Russo, Susana; et al.; A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cycles; MDPI; Viruses; 13; 12; 12-2021; 1-211999-4915CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.3390/v13122484info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:21:16Zoai:ri.conicet.gov.ar:11336/182003instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:21:16.68CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cycles |
title |
A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cycles |
spellingShingle |
A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cycles Caraballo, Diego Alfredo DOG-RELATED HOST SHIFT NUCLEOPROTEIN PHYLOGENY RABIES RECOMBINATION SELECTION |
title_short |
A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cycles |
title_full |
A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cycles |
title_fullStr |
A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cycles |
title_full_unstemmed |
A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cycles |
title_sort |
A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cycles |
dc.creator.none.fl_str_mv |
Caraballo, Diego Alfredo Lema, Cristina Novaro, Laura Gury Dohmen, Federico Russo, Susana Beltrán, Fernando J. Palacios, Gustavo Cisterna, Daniel Marcelo |
author |
Caraballo, Diego Alfredo |
author_facet |
Caraballo, Diego Alfredo Lema, Cristina Novaro, Laura Gury Dohmen, Federico Russo, Susana Beltrán, Fernando J. Palacios, Gustavo Cisterna, Daniel Marcelo |
author_role |
author |
author2 |
Lema, Cristina Novaro, Laura Gury Dohmen, Federico Russo, Susana Beltrán, Fernando J. Palacios, Gustavo Cisterna, Daniel Marcelo |
author2_role |
author author author author author author author |
dc.subject.none.fl_str_mv |
DOG-RELATED HOST SHIFT NUCLEOPROTEIN PHYLOGENY RABIES RECOMBINATION SELECTION |
topic |
DOG-RELATED HOST SHIFT NUCLEOPROTEIN PHYLOGENY RABIES RECOMBINATION SELECTION |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
The rabies virus (RABV) is characterized by a history dominated by host shifts within and among bats and carnivores. One of the main outcomes of long-term RABV maintenance in dogs was the establishment of variants in a wide variety of mesocarnivores. In this study, we present the most comprehensive phylogenetic and phylogeographic analysis, contributing to a better understanding of the origins, diversification, and the role of different host species in the evolution and diffusion of a dog-related variant endemic of South America. A total of 237 complete Nucleoprotein gene sequences were studied, corresponding to wild and domestic species, performing selection analyses, ancestral states reconstructions, and recombination analyses. This variant originated in Brazil and disseminated through Argentina and Paraguay, where a previously unknown lineage was found. A single host shift was identified in the phylogeny, from dog to the crab-eating fox (Cerdocyon thous) in the Northeast of Brazil. Although this process occurred in a background of purifying selection, there is evidence of adaptive evolution-or selection of sub-consensus sequences-in internal branches after the host shift. The interaction of domestic and wild cycles persisted after host switching, as revealed by spillover and putative recombination events. Fil: Caraballo, Diego Alfredo. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina Fil: Lema, Cristina. Dirección Nacional de Instituto de Investigación. Administración Nacional de Laboratorio E Instituto de Salud "Dr. C. G. Malbran". Departamento Virus; Argentina Fil: Novaro, Laura. Ministerio de Agricultura, Ganadería, Pesca y Alimento. Servicio Nacional de Sanidad y Calidad Agroalimentaria; Argentina Fil: Gury Dohmen, Federico. Gobierno de la Ciudad Autónoma de Buenos Aires. Ministerio de Salud. Instituto de Zoonosis Luis Pasteur; Argentina Fil: Russo, Susana. Ministerio de Agricultura, Ganadería, Pesca y Alimento. Servicio Nacional de Sanidad y Calidad Agroalimentaria; Argentina Fil: Beltrán, Fernando J.. Gobierno de la Ciudad Autónoma de Buenos Aires. Ministerio de Salud. Instituto de Zoonosis Luis Pasteur; Argentina Fil: Palacios, Gustavo. Icahn School of Medicine at Mount Sinai; Estados Unidos Fil: Cisterna, Daniel Marcelo. Dirección Nacional de Instituto de Investigación. Administración Nacional de Laboratorio E Instituto de Salud "Dr. C. G. Malbran". Departamento Virus; Argentina |
description |
The rabies virus (RABV) is characterized by a history dominated by host shifts within and among bats and carnivores. One of the main outcomes of long-term RABV maintenance in dogs was the establishment of variants in a wide variety of mesocarnivores. In this study, we present the most comprehensive phylogenetic and phylogeographic analysis, contributing to a better understanding of the origins, diversification, and the role of different host species in the evolution and diffusion of a dog-related variant endemic of South America. A total of 237 complete Nucleoprotein gene sequences were studied, corresponding to wild and domestic species, performing selection analyses, ancestral states reconstructions, and recombination analyses. This variant originated in Brazil and disseminated through Argentina and Paraguay, where a previously unknown lineage was found. A single host shift was identified in the phylogeny, from dog to the crab-eating fox (Cerdocyon thous) in the Northeast of Brazil. Although this process occurred in a background of purifying selection, there is evidence of adaptive evolution-or selection of sub-consensus sequences-in internal branches after the host shift. The interaction of domestic and wild cycles persisted after host switching, as revealed by spillover and putative recombination events. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-12 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/182003 Caraballo, Diego Alfredo; Lema, Cristina; Novaro, Laura; Gury Dohmen, Federico; Russo, Susana; et al.; A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cycles; MDPI; Viruses; 13; 12; 12-2021; 1-21 1999-4915 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/182003 |
identifier_str_mv |
Caraballo, Diego Alfredo; Lema, Cristina; Novaro, Laura; Gury Dohmen, Federico; Russo, Susana; et al.; A novel terrestrial rabies virus lineage occurring in south america: Origin, diversification, and evidence of contact between wild and domestic cycles; MDPI; Viruses; 13; 12; 12-2021; 1-21 1999-4915 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/doi/10.3390/v13122484 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
MDPI |
publisher.none.fl_str_mv |
MDPI |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
reponame_str |
CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
_version_ |
1844614200760991744 |
score |
13.070432 |