A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients
- Autores
- Ventura, Alejandra; Bruno, Luciana; Demuro, Angelo; Parker, Ian; Ponce Dawson, Silvina Martha
- Año de publicación
- 2005
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Local intracellular Ca2+ signals result from Ca2+ flux into the cytosol through individual channels or clusters of channels. To gain a mechanistic understanding of these events we need to know the magnitude and spatial distribution of the underlying Ca2+ flux. However, this is difficult to infer from fluorescence Ca2+ images because the distribution of Ca2+-bound dye is affected by poorly characterized processes including diffusion of Ca2+ ions, their binding to mobile and immobile buffers, and sequestration by Ca2+ pumps. Several methods have previously been proposed to derive Ca2+ flux from fluorescence images, but all require explicit knowledge or assumptions regarding these processes. We now present a novel algorithm that requires few assumptions and is largely model-independent. By testing the algorithm with both numerically generated image data and experimental images of sparklets resulting from Ca2+ flux through individual voltage-gated channels, we show that it satisfactorily reconstructs the magnitude and time course of the underlying Ca2+ currents. © 2005 by the Biophysical Society.
Fil: Ventura, Alejandra. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Física de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Física de Buenos Aires; Argentina
Fil: Bruno, Luciana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Física de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Física de Buenos Aires; Argentina
Fil: Demuro, Angelo. University of California at Irvine; Estados Unidos
Fil: Parker, Ian. University of California at Irvine; Estados Unidos
Fil: Ponce Dawson, Silvina Martha. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Física de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Física de Buenos Aires; Argentina - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
.jpg)
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/61174
Ver los metadatos del registro completo
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A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transientsVentura, AlejandraBruno, LucianaDemuro, AngeloParker, IanPonce Dawson, Silvina Marthahttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Local intracellular Ca2+ signals result from Ca2+ flux into the cytosol through individual channels or clusters of channels. To gain a mechanistic understanding of these events we need to know the magnitude and spatial distribution of the underlying Ca2+ flux. However, this is difficult to infer from fluorescence Ca2+ images because the distribution of Ca2+-bound dye is affected by poorly characterized processes including diffusion of Ca2+ ions, their binding to mobile and immobile buffers, and sequestration by Ca2+ pumps. Several methods have previously been proposed to derive Ca2+ flux from fluorescence images, but all require explicit knowledge or assumptions regarding these processes. We now present a novel algorithm that requires few assumptions and is largely model-independent. By testing the algorithm with both numerically generated image data and experimental images of sparklets resulting from Ca2+ flux through individual voltage-gated channels, we show that it satisfactorily reconstructs the magnitude and time course of the underlying Ca2+ currents. © 2005 by the Biophysical Society.Fil: Ventura, Alejandra. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Física de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Física de Buenos Aires; ArgentinaFil: Bruno, Luciana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Física de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Física de Buenos Aires; ArgentinaFil: Demuro, Angelo. University of California at Irvine; Estados UnidosFil: Parker, Ian. University of California at Irvine; Estados UnidosFil: Ponce Dawson, Silvina Martha. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Física de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Física de Buenos Aires; ArgentinaCell Press2005-12info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/61174Ventura, Alejandra; Bruno, Luciana; Demuro, Angelo; Parker, Ian; Ponce Dawson, Silvina Martha; A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients; Cell Press; Biophysical Journal; 88; 4; 12-2005; 2403-24210006-3495CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1529/biophysj.104.045260info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2026-02-26T10:27:48Zoai:ri.conicet.gov.ar:11336/61174instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982026-02-26 10:27:48.792CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
| dc.title.none.fl_str_mv |
A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients |
| title |
A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients |
| spellingShingle |
A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients Ventura, Alejandra |
| title_short |
A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients |
| title_full |
A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients |
| title_fullStr |
A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients |
| title_full_unstemmed |
A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients |
| title_sort |
A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients |
| dc.creator.none.fl_str_mv |
Ventura, Alejandra Bruno, Luciana Demuro, Angelo Parker, Ian Ponce Dawson, Silvina Martha |
| author |
Ventura, Alejandra |
| author_facet |
Ventura, Alejandra Bruno, Luciana Demuro, Angelo Parker, Ian Ponce Dawson, Silvina Martha |
| author_role |
author |
| author2 |
Bruno, Luciana Demuro, Angelo Parker, Ian Ponce Dawson, Silvina Martha |
| author2_role |
author author author author |
| purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
| dc.description.none.fl_txt_mv |
Local intracellular Ca2+ signals result from Ca2+ flux into the cytosol through individual channels or clusters of channels. To gain a mechanistic understanding of these events we need to know the magnitude and spatial distribution of the underlying Ca2+ flux. However, this is difficult to infer from fluorescence Ca2+ images because the distribution of Ca2+-bound dye is affected by poorly characterized processes including diffusion of Ca2+ ions, their binding to mobile and immobile buffers, and sequestration by Ca2+ pumps. Several methods have previously been proposed to derive Ca2+ flux from fluorescence images, but all require explicit knowledge or assumptions regarding these processes. We now present a novel algorithm that requires few assumptions and is largely model-independent. By testing the algorithm with both numerically generated image data and experimental images of sparklets resulting from Ca2+ flux through individual voltage-gated channels, we show that it satisfactorily reconstructs the magnitude and time course of the underlying Ca2+ currents. © 2005 by the Biophysical Society. Fil: Ventura, Alejandra. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Física de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Física de Buenos Aires; Argentina Fil: Bruno, Luciana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Física de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Física de Buenos Aires; Argentina Fil: Demuro, Angelo. University of California at Irvine; Estados Unidos Fil: Parker, Ian. University of California at Irvine; Estados Unidos Fil: Ponce Dawson, Silvina Martha. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Física de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Física de Buenos Aires; Argentina |
| description |
Local intracellular Ca2+ signals result from Ca2+ flux into the cytosol through individual channels or clusters of channels. To gain a mechanistic understanding of these events we need to know the magnitude and spatial distribution of the underlying Ca2+ flux. However, this is difficult to infer from fluorescence Ca2+ images because the distribution of Ca2+-bound dye is affected by poorly characterized processes including diffusion of Ca2+ ions, their binding to mobile and immobile buffers, and sequestration by Ca2+ pumps. Several methods have previously been proposed to derive Ca2+ flux from fluorescence images, but all require explicit knowledge or assumptions regarding these processes. We now present a novel algorithm that requires few assumptions and is largely model-independent. By testing the algorithm with both numerically generated image data and experimental images of sparklets resulting from Ca2+ flux through individual voltage-gated channels, we show that it satisfactorily reconstructs the magnitude and time course of the underlying Ca2+ currents. © 2005 by the Biophysical Society. |
| publishDate |
2005 |
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2005-12 |
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info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
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article |
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publishedVersion |
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http://hdl.handle.net/11336/61174 Ventura, Alejandra; Bruno, Luciana; Demuro, Angelo; Parker, Ian; Ponce Dawson, Silvina Martha; A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients; Cell Press; Biophysical Journal; 88; 4; 12-2005; 2403-2421 0006-3495 CONICET Digital CONICET |
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http://hdl.handle.net/11336/61174 |
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Ventura, Alejandra; Bruno, Luciana; Demuro, Angelo; Parker, Ian; Ponce Dawson, Silvina Martha; A model-independent algorithm to derive Ca2+ fluxes underlying local cytosolic Ca2+ transients; Cell Press; Biophysical Journal; 88; 4; 12-2005; 2403-2421 0006-3495 CONICET Digital CONICET |
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