Genome rearrangements derived from autopolyploidization in Paspalum sp.
- Autores
- Martelotto, Luciano G.; Ortiz, Juan Pablo Amelio; Stein, Juliana; Espinoza, Francisco; Quarin, Camilo Luis; Pessino, Silvina Claudia
- Año de publicación
- 2007
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Rapid sequence rearrangements along with alterations in cytosine-directed methylation patterns follow allopolyploid formation in several plant species. The occurrence of similar changes is yet to be examined in detail during the generation of autopolyploids. The objective of this work was to investigate the presence of nascent variation in genome sequence after autopolyploidization in two Paspalum species. The increments of ploidy level were produced either by hybridization involving unreduced gametes or colchicine treatment. Genetic modifications affected 15–23% and 9.55% of the genomic loci in Paspalum rufum and Paspalum notatum, respectively. In all cases the frequency of band loss from the progenitors was significantly higher than that of novel band gain. In random amplified polymorphic DNA (RAPD) experiments the majority of polymorphisms were detected by particular sets of primers, suggesting that repetitive domains were preferentially targeted. Several P. notatum polymorphic fragments were cloned, sequenced and used as probes in genomic hybridization analyses. Some of them corresponded to interspersed middle-repetitive sequences with unknown function. Methylation-sensitive genomic hybridization showed that sequence modifications occurred invariably in cytosine-methylated regions, which remained methylated after polyploidization.
Fil: Martelotto, Luciano G.. Universidad Nacional de Rosario; Argentina
Fil: Ortiz, Juan Pablo Amelio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina. Universidad Nacional de Rosario; Argentina
Fil: Stein, Juliana. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias; Argentina
Fil: Espinoza, Francisco. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina
Fil: Quarin, Camilo Luis. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina
Fil: Pessino, Silvina Claudia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Instituto de Investigaciones en Ciencias Agrarias de Rosario. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias. Instituto de Investigaciones en Ciencias Agrarias de Rosario; Argentina - Materia
-
Autoploidy
Genome Evolution
Genome Variation
Molecular Markers - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-nd/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/46853
Ver los metadatos del registro completo
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oai:ri.conicet.gov.ar:11336/46853 |
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Genome rearrangements derived from autopolyploidization in Paspalum sp.Martelotto, Luciano G.Ortiz, Juan Pablo AmelioStein, JulianaEspinoza, FranciscoQuarin, Camilo LuisPessino, Silvina ClaudiaAutoploidyGenome EvolutionGenome VariationMolecular Markershttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Rapid sequence rearrangements along with alterations in cytosine-directed methylation patterns follow allopolyploid formation in several plant species. The occurrence of similar changes is yet to be examined in detail during the generation of autopolyploids. The objective of this work was to investigate the presence of nascent variation in genome sequence after autopolyploidization in two Paspalum species. The increments of ploidy level were produced either by hybridization involving unreduced gametes or colchicine treatment. Genetic modifications affected 15–23% and 9.55% of the genomic loci in Paspalum rufum and Paspalum notatum, respectively. In all cases the frequency of band loss from the progenitors was significantly higher than that of novel band gain. In random amplified polymorphic DNA (RAPD) experiments the majority of polymorphisms were detected by particular sets of primers, suggesting that repetitive domains were preferentially targeted. Several P. notatum polymorphic fragments were cloned, sequenced and used as probes in genomic hybridization analyses. Some of them corresponded to interspersed middle-repetitive sequences with unknown function. Methylation-sensitive genomic hybridization showed that sequence modifications occurred invariably in cytosine-methylated regions, which remained methylated after polyploidization.Fil: Martelotto, Luciano G.. Universidad Nacional de Rosario; ArgentinaFil: Ortiz, Juan Pablo Amelio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina. Universidad Nacional de Rosario; ArgentinaFil: Stein, Juliana. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias; ArgentinaFil: Espinoza, Francisco. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; ArgentinaFil: Quarin, Camilo Luis. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; ArgentinaFil: Pessino, Silvina Claudia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Instituto de Investigaciones en Ciencias Agrarias de Rosario. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias. Instituto de Investigaciones en Ciencias Agrarias de Rosario; ArgentinaElsevier Ireland2007-12info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/46853Martelotto, Luciano G.; Ortiz, Juan Pablo Amelio; Stein, Juliana; Espinoza, Francisco; Quarin, Camilo Luis; et al.; Genome rearrangements derived from autopolyploidization in Paspalum sp.; Elsevier Ireland; Plant Science; 172; 5; 12-2007; 970-9770168-9452CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1016/j.plantsci.2007.02.001info:eu-repo/semantics/altIdentifier/url/https://www.sciencedirect.com/science/article/pii/S0168945207000520info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:17:29Zoai:ri.conicet.gov.ar:11336/46853instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:17:29.626CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
Genome rearrangements derived from autopolyploidization in Paspalum sp. |
title |
Genome rearrangements derived from autopolyploidization in Paspalum sp. |
spellingShingle |
Genome rearrangements derived from autopolyploidization in Paspalum sp. Martelotto, Luciano G. Autoploidy Genome Evolution Genome Variation Molecular Markers |
title_short |
Genome rearrangements derived from autopolyploidization in Paspalum sp. |
title_full |
Genome rearrangements derived from autopolyploidization in Paspalum sp. |
title_fullStr |
Genome rearrangements derived from autopolyploidization in Paspalum sp. |
title_full_unstemmed |
Genome rearrangements derived from autopolyploidization in Paspalum sp. |
title_sort |
Genome rearrangements derived from autopolyploidization in Paspalum sp. |
dc.creator.none.fl_str_mv |
Martelotto, Luciano G. Ortiz, Juan Pablo Amelio Stein, Juliana Espinoza, Francisco Quarin, Camilo Luis Pessino, Silvina Claudia |
author |
Martelotto, Luciano G. |
author_facet |
Martelotto, Luciano G. Ortiz, Juan Pablo Amelio Stein, Juliana Espinoza, Francisco Quarin, Camilo Luis Pessino, Silvina Claudia |
author_role |
author |
author2 |
Ortiz, Juan Pablo Amelio Stein, Juliana Espinoza, Francisco Quarin, Camilo Luis Pessino, Silvina Claudia |
author2_role |
author author author author author |
dc.subject.none.fl_str_mv |
Autoploidy Genome Evolution Genome Variation Molecular Markers |
topic |
Autoploidy Genome Evolution Genome Variation Molecular Markers |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
Rapid sequence rearrangements along with alterations in cytosine-directed methylation patterns follow allopolyploid formation in several plant species. The occurrence of similar changes is yet to be examined in detail during the generation of autopolyploids. The objective of this work was to investigate the presence of nascent variation in genome sequence after autopolyploidization in two Paspalum species. The increments of ploidy level were produced either by hybridization involving unreduced gametes or colchicine treatment. Genetic modifications affected 15–23% and 9.55% of the genomic loci in Paspalum rufum and Paspalum notatum, respectively. In all cases the frequency of band loss from the progenitors was significantly higher than that of novel band gain. In random amplified polymorphic DNA (RAPD) experiments the majority of polymorphisms were detected by particular sets of primers, suggesting that repetitive domains were preferentially targeted. Several P. notatum polymorphic fragments were cloned, sequenced and used as probes in genomic hybridization analyses. Some of them corresponded to interspersed middle-repetitive sequences with unknown function. Methylation-sensitive genomic hybridization showed that sequence modifications occurred invariably in cytosine-methylated regions, which remained methylated after polyploidization. Fil: Martelotto, Luciano G.. Universidad Nacional de Rosario; Argentina Fil: Ortiz, Juan Pablo Amelio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina. Universidad Nacional de Rosario; Argentina Fil: Stein, Juliana. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias; Argentina Fil: Espinoza, Francisco. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina Fil: Quarin, Camilo Luis. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina Fil: Pessino, Silvina Claudia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Instituto de Investigaciones en Ciencias Agrarias de Rosario. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias. Instituto de Investigaciones en Ciencias Agrarias de Rosario; Argentina |
description |
Rapid sequence rearrangements along with alterations in cytosine-directed methylation patterns follow allopolyploid formation in several plant species. The occurrence of similar changes is yet to be examined in detail during the generation of autopolyploids. The objective of this work was to investigate the presence of nascent variation in genome sequence after autopolyploidization in two Paspalum species. The increments of ploidy level were produced either by hybridization involving unreduced gametes or colchicine treatment. Genetic modifications affected 15–23% and 9.55% of the genomic loci in Paspalum rufum and Paspalum notatum, respectively. In all cases the frequency of band loss from the progenitors was significantly higher than that of novel band gain. In random amplified polymorphic DNA (RAPD) experiments the majority of polymorphisms were detected by particular sets of primers, suggesting that repetitive domains were preferentially targeted. Several P. notatum polymorphic fragments were cloned, sequenced and used as probes in genomic hybridization analyses. Some of them corresponded to interspersed middle-repetitive sequences with unknown function. Methylation-sensitive genomic hybridization showed that sequence modifications occurred invariably in cytosine-methylated regions, which remained methylated after polyploidization. |
publishDate |
2007 |
dc.date.none.fl_str_mv |
2007-12 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/46853 Martelotto, Luciano G.; Ortiz, Juan Pablo Amelio; Stein, Juliana; Espinoza, Francisco; Quarin, Camilo Luis; et al.; Genome rearrangements derived from autopolyploidization in Paspalum sp.; Elsevier Ireland; Plant Science; 172; 5; 12-2007; 970-977 0168-9452 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/46853 |
identifier_str_mv |
Martelotto, Luciano G.; Ortiz, Juan Pablo Amelio; Stein, Juliana; Espinoza, Francisco; Quarin, Camilo Luis; et al.; Genome rearrangements derived from autopolyploidization in Paspalum sp.; Elsevier Ireland; Plant Science; 172; 5; 12-2007; 970-977 0168-9452 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/doi/10.1016/j.plantsci.2007.02.001 info:eu-repo/semantics/altIdentifier/url/https://www.sciencedirect.com/science/article/pii/S0168945207000520 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-nd/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-nd/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier Ireland |
publisher.none.fl_str_mv |
Elsevier Ireland |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
reponame_str |
CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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1844614128251961344 |
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13.070432 |