Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavispora

Autores
Rostan Navarro, María del Mar; Mamani, Darío; Heredia, Ana Micaela; Juarez, Alejandro Roger; Kurth, Daniel German
Año de publicación
2023
Idioma
español castellano
Tipo de recurso
documento de conferencia
Estado
versión publicada
Descripción
Fungi cause diseases that commonly lead to plant rot and wilting, and strawberries are one of the crops most attacked by fungi present in the soil. Many of them, such as Macrophomina, Phytophthora and Fusarium, are relevant and harmful in agriculture due to their persistence and survival. In recent years, Neopestalotiopsis clavispora, a fungus originally considered harmless, was confirmed as the cause of diseases in plantations of Corrientes and Tucumán. Since the disease is relatively new, known fungicides used for control are not completely effective and there are no established strategies to control the disease caused by N. clavispora. The general objective of this work is to provide alternatives for biocontrol. New trends in crop protection are oriented towards a reduction in the dependence on conventional pesticides, which increases the interest in effective and sustainable alternative strategies.Bacteria, yeast and fungi were isolated from soil obtained from a strawberry patch in INTA-Famaillá. Rows associated with three different varieties of strawberries were sampled, in the rhizosphere and leaves of healthy plants. Samples were diluted in sterile physiological solution, and serial dilutions were plated in Petri dishes with Potato Dextrose Agar (PDA) medium supplemented with chloramphenicol for fungi or Luria Bertani (LB) medium for bacteria. Eighty isolates were obtained, including 65 bacteria and 15 fungi. They were evaluated against the pathogen N. clavispora using the dual culture method and selected candidates were further analysed.Candidates with inhibitory activity in the dual cultures were identified by molecular techniques. DNA was extracted using a commercial kit and PCR amplification was performed from the extracted DNA. For bacteria, the 16S gene was amplified, and for fungi, a fragment of the ITS region was amplified. The amplicons obtained were sent to a commercial supplier for sequencing. The identified organisms included Bacillus sp. and Trichoderma sp. Plant growth promotion assays were performed in vitro. These included siderophore production, production of total indoles, and phosphate solubilisation. Most strains produced indoles and solubilized phosphates in vitro, however, siderophore production was not detected. Candidates were also evaluated in dual cultures against the main strawberry fungal pathogens, including Colletotrichum sp. and Botrytis sp., with diverse responses against them.These results allowed us to select strains for screenhouse trials, currently in development.
Fil: Rostan Navarro, María del Mar. Universidad Nacional de Tucumán. Facultad de Bioquímica, Química y Farmacia; Argentina
Fil: Mamani, Darío. Universidad Nacional de Tucumán. Facultad de Bioquímica, Química y Farmacia; Argentina
Fil: Heredia, Ana Micaela. Instituto Nacional de Tecnología Agropecuaria. Centro Regional Tucuman-Santiago del Estero. Estación Experimental Agropecuaria Famaillá; Argentina
Fil: Juarez, Alejandro Roger. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
Fil: Kurth, Daniel German. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
XVIII Congreso Anual de la Sociedad Argentina de Microbiología General
Chapadmalal
Argentina
Sociedad Argentina de Microbiología General
Materia
BACILLUS
PGPR
BIOCONTROL
FUNGUI
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/234131

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network_name_str CONICET Digital (CONICET)
spelling Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavisporaRostan Navarro, María del MarMamani, DaríoHeredia, Ana MicaelaJuarez, Alejandro RogerKurth, Daniel GermanBACILLUSPGPRBIOCONTROLFUNGUIhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Fungi cause diseases that commonly lead to plant rot and wilting, and strawberries are one of the crops most attacked by fungi present in the soil. Many of them, such as Macrophomina, Phytophthora and Fusarium, are relevant and harmful in agriculture due to their persistence and survival. In recent years, Neopestalotiopsis clavispora, a fungus originally considered harmless, was confirmed as the cause of diseases in plantations of Corrientes and Tucumán. Since the disease is relatively new, known fungicides used for control are not completely effective and there are no established strategies to control the disease caused by N. clavispora. The general objective of this work is to provide alternatives for biocontrol. New trends in crop protection are oriented towards a reduction in the dependence on conventional pesticides, which increases the interest in effective and sustainable alternative strategies.Bacteria, yeast and fungi were isolated from soil obtained from a strawberry patch in INTA-Famaillá. Rows associated with three different varieties of strawberries were sampled, in the rhizosphere and leaves of healthy plants. Samples were diluted in sterile physiological solution, and serial dilutions were plated in Petri dishes with Potato Dextrose Agar (PDA) medium supplemented with chloramphenicol for fungi or Luria Bertani (LB) medium for bacteria. Eighty isolates were obtained, including 65 bacteria and 15 fungi. They were evaluated against the pathogen N. clavispora using the dual culture method and selected candidates were further analysed.Candidates with inhibitory activity in the dual cultures were identified by molecular techniques. DNA was extracted using a commercial kit and PCR amplification was performed from the extracted DNA. For bacteria, the 16S gene was amplified, and for fungi, a fragment of the ITS region was amplified. The amplicons obtained were sent to a commercial supplier for sequencing. The identified organisms included Bacillus sp. and Trichoderma sp. Plant growth promotion assays were performed in vitro. These included siderophore production, production of total indoles, and phosphate solubilisation. Most strains produced indoles and solubilized phosphates in vitro, however, siderophore production was not detected. Candidates were also evaluated in dual cultures against the main strawberry fungal pathogens, including Colletotrichum sp. and Botrytis sp., with diverse responses against them.These results allowed us to select strains for screenhouse trials, currently in development.Fil: Rostan Navarro, María del Mar. Universidad Nacional de Tucumán. Facultad de Bioquímica, Química y Farmacia; ArgentinaFil: Mamani, Darío. Universidad Nacional de Tucumán. Facultad de Bioquímica, Química y Farmacia; ArgentinaFil: Heredia, Ana Micaela. Instituto Nacional de Tecnología Agropecuaria. Centro Regional Tucuman-Santiago del Estero. Estación Experimental Agropecuaria Famaillá; ArgentinaFil: Juarez, Alejandro Roger. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; ArgentinaFil: Kurth, Daniel German. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; ArgentinaXVIII Congreso Anual de la Sociedad Argentina de Microbiología GeneralChapadmalalArgentinaSociedad Argentina de Microbiología GeneralSociedad Argentina de Microbiología General2023info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObjectCongresoBookhttp://purl.org/coar/resource_type/c_5794info:ar-repo/semantics/documentoDeConferenciaapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/234131Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavispora; XVIII Congreso Anual de la Sociedad Argentina de Microbiología General; Chapadmalal; Argentina; 2023; 176-176CONICET DigitalCONICETspainfo:eu-repo/semantics/altIdentifier/url/https://samige.org.ar/wp-content/uploads/2023/09/Libro-de-Resumenes-Final.pdfNacionalinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-17T11:44:24Zoai:ri.conicet.gov.ar:11336/234131instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-17 11:44:25.258CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavispora
title Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavispora
spellingShingle Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavispora
Rostan Navarro, María del Mar
BACILLUS
PGPR
BIOCONTROL
FUNGUI
title_short Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavispora
title_full Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavispora
title_fullStr Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavispora
title_full_unstemmed Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavispora
title_sort Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavispora
dc.creator.none.fl_str_mv Rostan Navarro, María del Mar
Mamani, Darío
Heredia, Ana Micaela
Juarez, Alejandro Roger
Kurth, Daniel German
author Rostan Navarro, María del Mar
author_facet Rostan Navarro, María del Mar
Mamani, Darío
Heredia, Ana Micaela
Juarez, Alejandro Roger
Kurth, Daniel German
author_role author
author2 Mamani, Darío
Heredia, Ana Micaela
Juarez, Alejandro Roger
Kurth, Daniel German
author2_role author
author
author
author
dc.subject.none.fl_str_mv BACILLUS
PGPR
BIOCONTROL
FUNGUI
topic BACILLUS
PGPR
BIOCONTROL
FUNGUI
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Fungi cause diseases that commonly lead to plant rot and wilting, and strawberries are one of the crops most attacked by fungi present in the soil. Many of them, such as Macrophomina, Phytophthora and Fusarium, are relevant and harmful in agriculture due to their persistence and survival. In recent years, Neopestalotiopsis clavispora, a fungus originally considered harmless, was confirmed as the cause of diseases in plantations of Corrientes and Tucumán. Since the disease is relatively new, known fungicides used for control are not completely effective and there are no established strategies to control the disease caused by N. clavispora. The general objective of this work is to provide alternatives for biocontrol. New trends in crop protection are oriented towards a reduction in the dependence on conventional pesticides, which increases the interest in effective and sustainable alternative strategies.Bacteria, yeast and fungi were isolated from soil obtained from a strawberry patch in INTA-Famaillá. Rows associated with three different varieties of strawberries were sampled, in the rhizosphere and leaves of healthy plants. Samples were diluted in sterile physiological solution, and serial dilutions were plated in Petri dishes with Potato Dextrose Agar (PDA) medium supplemented with chloramphenicol for fungi or Luria Bertani (LB) medium for bacteria. Eighty isolates were obtained, including 65 bacteria and 15 fungi. They were evaluated against the pathogen N. clavispora using the dual culture method and selected candidates were further analysed.Candidates with inhibitory activity in the dual cultures were identified by molecular techniques. DNA was extracted using a commercial kit and PCR amplification was performed from the extracted DNA. For bacteria, the 16S gene was amplified, and for fungi, a fragment of the ITS region was amplified. The amplicons obtained were sent to a commercial supplier for sequencing. The identified organisms included Bacillus sp. and Trichoderma sp. Plant growth promotion assays were performed in vitro. These included siderophore production, production of total indoles, and phosphate solubilisation. Most strains produced indoles and solubilized phosphates in vitro, however, siderophore production was not detected. Candidates were also evaluated in dual cultures against the main strawberry fungal pathogens, including Colletotrichum sp. and Botrytis sp., with diverse responses against them.These results allowed us to select strains for screenhouse trials, currently in development.
Fil: Rostan Navarro, María del Mar. Universidad Nacional de Tucumán. Facultad de Bioquímica, Química y Farmacia; Argentina
Fil: Mamani, Darío. Universidad Nacional de Tucumán. Facultad de Bioquímica, Química y Farmacia; Argentina
Fil: Heredia, Ana Micaela. Instituto Nacional de Tecnología Agropecuaria. Centro Regional Tucuman-Santiago del Estero. Estación Experimental Agropecuaria Famaillá; Argentina
Fil: Juarez, Alejandro Roger. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
Fil: Kurth, Daniel German. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
XVIII Congreso Anual de la Sociedad Argentina de Microbiología General
Chapadmalal
Argentina
Sociedad Argentina de Microbiología General
description Fungi cause diseases that commonly lead to plant rot and wilting, and strawberries are one of the crops most attacked by fungi present in the soil. Many of them, such as Macrophomina, Phytophthora and Fusarium, are relevant and harmful in agriculture due to their persistence and survival. In recent years, Neopestalotiopsis clavispora, a fungus originally considered harmless, was confirmed as the cause of diseases in plantations of Corrientes and Tucumán. Since the disease is relatively new, known fungicides used for control are not completely effective and there are no established strategies to control the disease caused by N. clavispora. The general objective of this work is to provide alternatives for biocontrol. New trends in crop protection are oriented towards a reduction in the dependence on conventional pesticides, which increases the interest in effective and sustainable alternative strategies.Bacteria, yeast and fungi were isolated from soil obtained from a strawberry patch in INTA-Famaillá. Rows associated with three different varieties of strawberries were sampled, in the rhizosphere and leaves of healthy plants. Samples were diluted in sterile physiological solution, and serial dilutions were plated in Petri dishes with Potato Dextrose Agar (PDA) medium supplemented with chloramphenicol for fungi or Luria Bertani (LB) medium for bacteria. Eighty isolates were obtained, including 65 bacteria and 15 fungi. They were evaluated against the pathogen N. clavispora using the dual culture method and selected candidates were further analysed.Candidates with inhibitory activity in the dual cultures were identified by molecular techniques. DNA was extracted using a commercial kit and PCR amplification was performed from the extracted DNA. For bacteria, the 16S gene was amplified, and for fungi, a fragment of the ITS region was amplified. The amplicons obtained were sent to a commercial supplier for sequencing. The identified organisms included Bacillus sp. and Trichoderma sp. Plant growth promotion assays were performed in vitro. These included siderophore production, production of total indoles, and phosphate solubilisation. Most strains produced indoles and solubilized phosphates in vitro, however, siderophore production was not detected. Candidates were also evaluated in dual cultures against the main strawberry fungal pathogens, including Colletotrichum sp. and Botrytis sp., with diverse responses against them.These results allowed us to select strains for screenhouse trials, currently in development.
publishDate 2023
dc.date.none.fl_str_mv 2023
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Book
http://purl.org/coar/resource_type/c_5794
info:ar-repo/semantics/documentoDeConferencia
status_str publishedVersion
format conferenceObject
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/234131
Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavispora; XVIII Congreso Anual de la Sociedad Argentina de Microbiología General; Chapadmalal; Argentina; 2023; 176-176
CONICET Digital
CONICET
url http://hdl.handle.net/11336/234131
identifier_str_mv Biocontrol of the pathogenic fungus of strawberry Neopestalotiopsis clavispora; XVIII Congreso Anual de la Sociedad Argentina de Microbiología General; Chapadmalal; Argentina; 2023; 176-176
CONICET Digital
CONICET
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language spa
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://samige.org.ar/wp-content/uploads/2023/09/Libro-de-Resumenes-Final.pdf
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