Ancient vicariance is reinforced by adaptive divergence in the southern beech: Contributions from geogenomics

Autores
Fasanella, Mariana; Mathiasen, Paula; Juri, Gabriela; Díaz, Dayana G.; Hasbún, Rodrigo; Premoli, Andrea C.
Año de publicación
2022
Idioma
inglés
Tipo de recurso
artículo
Estado
versión aceptada
Descripción
Geogenomics seeks to understand geological processes linked to lineage divergence. However, the mechanisms that conserve ancient signals in spite of gene flow are still unclear. In the southern beech, the deep lineage divergence produced by vicariant events is associated with ancient marine transgressions. We hereby evaluate the hypothesis that this divergence is maintained by diversifying selection. Location: Southern Argentina and Chile. Taxon: Nothofagus dombeyi. Methods: The lineage divergence by means of analysis of molecular variance (AMOVA), principal coordinate analysis, assignment tests and multiple matrix regression analyses were assessed using chloroplast DNA and neutral and outlier single nucleotide polymorphisms (SNPs). Several environmental variables were used to characterize potential within-species niche structuring and genotype–environment associations. Results: Two deep-rooted latitudinally structured lineages resulted from cpDNA, the northern cluster being more genetically diverse than the southern one. Of the total of 2943 SNPs, 33 identified as outliers and produced two genetic clusters. Neutral SNPs yielded no structure by AMOVA, whereas higher (>75%) FST values were obtained for cpDNA and outlier SNPs. Precipitation variables were mostly associated with population clusters and suggested two climatic niches, consisting of cold and dry in the south and more variable precipitation, temperature and soil conditions in the north. Associations of genetic distance with environment and geography suggested isolation-by-distance and isolation-by-ecology or isolation-by-environment effects. Main conclusions: Ancient lineage divergence in N. dombeyi, originally driven by vicariance, has been maintained by diversifying selection under distinct environmental conditions that also define distinct within-species niches. Deeply rooted phylogeo- graphical breaks can be conserved in continuously distributed species in the absence of current geographical barriers. Yet, physical gradients exert differential selective pressures, which are maintained in the face of potential gene flow. As a result, selec tion can lead to geographically localized and differentially adapted groups of populations that can be detected by a combination of traditional phylogeographical and novel genomic methods.
Fil: Fasanella, Mariana. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.
Fil: Fasanella, Mariana. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina.
Fil: Mathiasen, Paula. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.
Fil: Mathiasen, Paula. Instituto de Investigaciones en Biodiversidad y Medioambiente; Argentina.
Fil: Mathiasen, Paula. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina.
Fil: Juri, Gabriela. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.
Fil: Juri, Gabriela. Universidad Nacional de Río Negro; Argentina.
Fil: Juri, Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina.
Fil: Juri, Gabriela. Instituto de Investigaciones en Recursos Naturales, Agroecología y Desarrollo Rural; Argentina.
Fil: Diaz, Dayana. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.
Fil: Diaz, Dayana. Instituto de Investigaciones en Biodiversidad y Medioambiente; Argentina.
Fil: Diaz, Dayana. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina.
Fil: Hasbún, Rodrigo. Universidad de Concepción. Facultad de Ciencias Forestales. Departamento de Silvicultura. Laboratorio de Epigenética Vegetal; Chile.
Fil: Premoli, Andrea C. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.
Fil: Premoli, Andrea C. Instituto de Investigaciones en Biodiversidad y Medioambiente; Argentina.
Fuente
Journal of Biogeography. Vol. 50 2023
Materia
Nothofagus dombeyi
cpDNA sequences
Patagonia
Ciencias de la Tierra y Medio Ambiente
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
Repositorio Digital Institucional (UNCo)
Institución
Universidad Nacional del Comahue
OAI Identificador
oai:rdi.uncoma.edu.ar:uncomaid/17700

id RDIUNCO_48e6af950f52d0fa612d89f03ca619e6
oai_identifier_str oai:rdi.uncoma.edu.ar:uncomaid/17700
network_acronym_str RDIUNCO
repository_id_str 7108
network_name_str Repositorio Digital Institucional (UNCo)
spelling Ancient vicariance is reinforced by adaptive divergence in the southern beech: Contributions from geogenomicsFasanella, MarianaMathiasen, PaulaJuri, GabrielaDíaz, Dayana G.Hasbún, RodrigoPremoli, Andrea C.Nothofagus dombeyicpDNA sequencesPatagoniahttps://purl.org/becyt/ford/1.6Ciencias de la Tierra y Medio AmbienteGeogenomics seeks to understand geological processes linked to lineage divergence. However, the mechanisms that conserve ancient signals in spite of gene flow are still unclear. In the southern beech, the deep lineage divergence produced by vicariant events is associated with ancient marine transgressions. We hereby evaluate the hypothesis that this divergence is maintained by diversifying selection. Location: Southern Argentina and Chile. Taxon: Nothofagus dombeyi. Methods: The lineage divergence by means of analysis of molecular variance (AMOVA), principal coordinate analysis, assignment tests and multiple matrix regression analyses were assessed using chloroplast DNA and neutral and outlier single nucleotide polymorphisms (SNPs). Several environmental variables were used to characterize potential within-species niche structuring and genotype–environment associations. Results: Two deep-rooted latitudinally structured lineages resulted from cpDNA, the northern cluster being more genetically diverse than the southern one. Of the total of 2943 SNPs, 33 identified as outliers and produced two genetic clusters. Neutral SNPs yielded no structure by AMOVA, whereas higher (>75%) FST values were obtained for cpDNA and outlier SNPs. Precipitation variables were mostly associated with population clusters and suggested two climatic niches, consisting of cold and dry in the south and more variable precipitation, temperature and soil conditions in the north. Associations of genetic distance with environment and geography suggested isolation-by-distance and isolation-by-ecology or isolation-by-environment effects. Main conclusions: Ancient lineage divergence in N. dombeyi, originally driven by vicariance, has been maintained by diversifying selection under distinct environmental conditions that also define distinct within-species niches. Deeply rooted phylogeo- graphical breaks can be conserved in continuously distributed species in the absence of current geographical barriers. Yet, physical gradients exert differential selective pressures, which are maintained in the face of potential gene flow. As a result, selec tion can lead to geographically localized and differentially adapted groups of populations that can be detected by a combination of traditional phylogeographical and novel genomic methods.Fil: Fasanella, Mariana. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.Fil: Fasanella, Mariana. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina.Fil: Mathiasen, Paula. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.Fil: Mathiasen, Paula. Instituto de Investigaciones en Biodiversidad y Medioambiente; Argentina.Fil: Mathiasen, Paula. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina.Fil: Juri, Gabriela. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.Fil: Juri, Gabriela. Universidad Nacional de Río Negro; Argentina.Fil: Juri, Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina.Fil: Juri, Gabriela. Instituto de Investigaciones en Recursos Naturales, Agroecología y Desarrollo Rural; Argentina.Fil: Diaz, Dayana. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.Fil: Diaz, Dayana. Instituto de Investigaciones en Biodiversidad y Medioambiente; Argentina.Fil: Diaz, Dayana. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina.Fil: Hasbún, Rodrigo. Universidad de Concepción. Facultad de Ciencias Forestales. Departamento de Silvicultura. Laboratorio de Epigenética Vegetal; Chile.Fil: Premoli, Andrea C. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.Fil: Premoli, Andrea C. Instituto de Investigaciones en Biodiversidad y Medioambiente; Argentina.John Wiley & Sons Ltd2022info:eu-repo/semantics/articleinfo:eu-repo/semantics/acceptedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfpp. 564-575application/pdfhttp://rdi.uncoma.edu.ar/handle/uncomaid/17700Journal of Biogeography. Vol. 50 2023reponame:Repositorio Digital Institucional (UNCo)instname:Universidad Nacional del Comahueenghttps://doi.org/10.1111/jbi.14554http://rdi.uncoma.edu.ar/handle/uncomaid/16887info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/2025-10-16T10:05:57Zoai:rdi.uncoma.edu.ar:uncomaid/17700instacron:UNCoInstitucionalhttp://rdi.uncoma.edu.ar/Universidad públicaNo correspondehttp://rdi.uncoma.edu.ar/oaimirtha.mateo@biblioteca.uncoma.edu.ar; adriana.acuna@biblioteca.uncoma.edu.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:71082025-10-16 10:05:57.402Repositorio Digital Institucional (UNCo) - Universidad Nacional del Comahuefalse
dc.title.none.fl_str_mv Ancient vicariance is reinforced by adaptive divergence in the southern beech: Contributions from geogenomics
title Ancient vicariance is reinforced by adaptive divergence in the southern beech: Contributions from geogenomics
spellingShingle Ancient vicariance is reinforced by adaptive divergence in the southern beech: Contributions from geogenomics
Fasanella, Mariana
Nothofagus dombeyi
cpDNA sequences
Patagonia
Ciencias de la Tierra y Medio Ambiente
title_short Ancient vicariance is reinforced by adaptive divergence in the southern beech: Contributions from geogenomics
title_full Ancient vicariance is reinforced by adaptive divergence in the southern beech: Contributions from geogenomics
title_fullStr Ancient vicariance is reinforced by adaptive divergence in the southern beech: Contributions from geogenomics
title_full_unstemmed Ancient vicariance is reinforced by adaptive divergence in the southern beech: Contributions from geogenomics
title_sort Ancient vicariance is reinforced by adaptive divergence in the southern beech: Contributions from geogenomics
dc.creator.none.fl_str_mv Fasanella, Mariana
Mathiasen, Paula
Juri, Gabriela
Díaz, Dayana G.
Hasbún, Rodrigo
Premoli, Andrea C.
author Fasanella, Mariana
author_facet Fasanella, Mariana
Mathiasen, Paula
Juri, Gabriela
Díaz, Dayana G.
Hasbún, Rodrigo
Premoli, Andrea C.
author_role author
author2 Mathiasen, Paula
Juri, Gabriela
Díaz, Dayana G.
Hasbún, Rodrigo
Premoli, Andrea C.
author2_role author
author
author
author
author
dc.subject.none.fl_str_mv Nothofagus dombeyi
cpDNA sequences
Patagonia
Ciencias de la Tierra y Medio Ambiente
topic Nothofagus dombeyi
cpDNA sequences
Patagonia
Ciencias de la Tierra y Medio Ambiente
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
dc.description.none.fl_txt_mv Geogenomics seeks to understand geological processes linked to lineage divergence. However, the mechanisms that conserve ancient signals in spite of gene flow are still unclear. In the southern beech, the deep lineage divergence produced by vicariant events is associated with ancient marine transgressions. We hereby evaluate the hypothesis that this divergence is maintained by diversifying selection. Location: Southern Argentina and Chile. Taxon: Nothofagus dombeyi. Methods: The lineage divergence by means of analysis of molecular variance (AMOVA), principal coordinate analysis, assignment tests and multiple matrix regression analyses were assessed using chloroplast DNA and neutral and outlier single nucleotide polymorphisms (SNPs). Several environmental variables were used to characterize potential within-species niche structuring and genotype–environment associations. Results: Two deep-rooted latitudinally structured lineages resulted from cpDNA, the northern cluster being more genetically diverse than the southern one. Of the total of 2943 SNPs, 33 identified as outliers and produced two genetic clusters. Neutral SNPs yielded no structure by AMOVA, whereas higher (>75%) FST values were obtained for cpDNA and outlier SNPs. Precipitation variables were mostly associated with population clusters and suggested two climatic niches, consisting of cold and dry in the south and more variable precipitation, temperature and soil conditions in the north. Associations of genetic distance with environment and geography suggested isolation-by-distance and isolation-by-ecology or isolation-by-environment effects. Main conclusions: Ancient lineage divergence in N. dombeyi, originally driven by vicariance, has been maintained by diversifying selection under distinct environmental conditions that also define distinct within-species niches. Deeply rooted phylogeo- graphical breaks can be conserved in continuously distributed species in the absence of current geographical barriers. Yet, physical gradients exert differential selective pressures, which are maintained in the face of potential gene flow. As a result, selec tion can lead to geographically localized and differentially adapted groups of populations that can be detected by a combination of traditional phylogeographical and novel genomic methods.
Fil: Fasanella, Mariana. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.
Fil: Fasanella, Mariana. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina.
Fil: Mathiasen, Paula. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.
Fil: Mathiasen, Paula. Instituto de Investigaciones en Biodiversidad y Medioambiente; Argentina.
Fil: Mathiasen, Paula. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina.
Fil: Juri, Gabriela. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.
Fil: Juri, Gabriela. Universidad Nacional de Río Negro; Argentina.
Fil: Juri, Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina.
Fil: Juri, Gabriela. Instituto de Investigaciones en Recursos Naturales, Agroecología y Desarrollo Rural; Argentina.
Fil: Diaz, Dayana. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.
Fil: Diaz, Dayana. Instituto de Investigaciones en Biodiversidad y Medioambiente; Argentina.
Fil: Diaz, Dayana. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina.
Fil: Hasbún, Rodrigo. Universidad de Concepción. Facultad de Ciencias Forestales. Departamento de Silvicultura. Laboratorio de Epigenética Vegetal; Chile.
Fil: Premoli, Andrea C. Universidad Nacional del Comahue. Centro Regional Universitario Bariloche; Argentina.
Fil: Premoli, Andrea C. Instituto de Investigaciones en Biodiversidad y Medioambiente; Argentina.
description Geogenomics seeks to understand geological processes linked to lineage divergence. However, the mechanisms that conserve ancient signals in spite of gene flow are still unclear. In the southern beech, the deep lineage divergence produced by vicariant events is associated with ancient marine transgressions. We hereby evaluate the hypothesis that this divergence is maintained by diversifying selection. Location: Southern Argentina and Chile. Taxon: Nothofagus dombeyi. Methods: The lineage divergence by means of analysis of molecular variance (AMOVA), principal coordinate analysis, assignment tests and multiple matrix regression analyses were assessed using chloroplast DNA and neutral and outlier single nucleotide polymorphisms (SNPs). Several environmental variables were used to characterize potential within-species niche structuring and genotype–environment associations. Results: Two deep-rooted latitudinally structured lineages resulted from cpDNA, the northern cluster being more genetically diverse than the southern one. Of the total of 2943 SNPs, 33 identified as outliers and produced two genetic clusters. Neutral SNPs yielded no structure by AMOVA, whereas higher (>75%) FST values were obtained for cpDNA and outlier SNPs. Precipitation variables were mostly associated with population clusters and suggested two climatic niches, consisting of cold and dry in the south and more variable precipitation, temperature and soil conditions in the north. Associations of genetic distance with environment and geography suggested isolation-by-distance and isolation-by-ecology or isolation-by-environment effects. Main conclusions: Ancient lineage divergence in N. dombeyi, originally driven by vicariance, has been maintained by diversifying selection under distinct environmental conditions that also define distinct within-species niches. Deeply rooted phylogeo- graphical breaks can be conserved in continuously distributed species in the absence of current geographical barriers. Yet, physical gradients exert differential selective pressures, which are maintained in the face of potential gene flow. As a result, selec tion can lead to geographically localized and differentially adapted groups of populations that can be detected by a combination of traditional phylogeographical and novel genomic methods.
publishDate 2022
dc.date.none.fl_str_mv 2022
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/acceptedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str acceptedVersion
dc.identifier.none.fl_str_mv http://rdi.uncoma.edu.ar/handle/uncomaid/17700
url http://rdi.uncoma.edu.ar/handle/uncomaid/17700
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://doi.org/10.1111/jbi.14554
http://rdi.uncoma.edu.ar/handle/uncomaid/16887
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
pp. 564-575
application/pdf
dc.publisher.none.fl_str_mv John Wiley & Sons Ltd
publisher.none.fl_str_mv John Wiley & Sons Ltd
dc.source.none.fl_str_mv Journal of Biogeography. Vol. 50 2023
reponame:Repositorio Digital Institucional (UNCo)
instname:Universidad Nacional del Comahue
reponame_str Repositorio Digital Institucional (UNCo)
collection Repositorio Digital Institucional (UNCo)
instname_str Universidad Nacional del Comahue
repository.name.fl_str_mv Repositorio Digital Institucional (UNCo) - Universidad Nacional del Comahue
repository.mail.fl_str_mv mirtha.mateo@biblioteca.uncoma.edu.ar; adriana.acuna@biblioteca.uncoma.edu.ar
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