An in silico analysis revealed a novel evolutionary lineage of putative mitoviruses

Autores
Jacquat, Andrés Gustavo; Ulla, Sofía Belén; Debat, Humberto Julio; Muñoz-Adalia, Emigdio Jordán; Theumer, Martín Gustavo; García Pedrajas, M. Dolores; Dambolena, José Sebastián
Año de publicación
2022
Idioma
inglés
Tipo de recurso
artículo
Estado
versión aceptada
Descripción
Mitoviruses (family Mitoviridae) are small capsid-less RNA viruses that replicate in the mitochondria of fungi and plants. However, to date, the only authentic animal mitovirus infecting an insect was identified as Lutzomyia longipalpis mitovirus 1 (LulMV1). Public databases of transcriptomic studies from several animals may be a good source for identifying the often missed mitoviruses. Consequently, a search of mitovirus-like transcripts at the NCBI Transcriptome Shotgun Assembly (TSA) library, and a search for the mitoviruses previously recorded at the NCBI non-redundant (nr) protein sequences library, were performed in order to identify new mitovirus-like sequences associated with animals. In total, 10 new putative mitoviruses were identified in the TSA database, and 8 putative mitoviruses in the nr protein database. To our knowledge, these results represent the first evidence of putative mitoviruses associated with poriferan, cnidarians, echinoderms, crustaceans, myriapods and arachnids. According to different phylogenetic inferences using the maximum likelihood method, these 18 putative mitoviruses form a robust monophyletic lineage with LulMV1, the only known animal-infecting mitovirus. These findings based on in silico procedures provide strong evidence for the existence of a clade of putative mitoviruses associated with animals, which has been provisionally named “kvinmitovirus”.
Instituto de Patología Vegetal
Fil: Jacquat, Andrés Gustavo. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales; Argentina
Fil: Jacquat, Andrés Gustavo. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto Multidisciplinario de Biología Vegetal (IMBIV); Argentina
Fil: Ulla, Sofía Belén. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales; Argentina
Fil: Ulla, Sofía Belén. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto Multidisciplinario de Biología Vegetal (IMBIV); Argentina
Fil: Debat, Humberto Julio. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Debat, Humberto Julio. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Muñoz-Adalia, Emigdio Jordán. Forest Sciences Center of Catalonia; España
Fil: Muñoz-Adalia, Emigdio Jordán. University of Lleida. Department of Crop and Forest Science; España
Fil: Theumer, Martín Gustavo. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Departamento de Bioquímica Clínica; Argentina
Fil: Theumer, Martín Gustavo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones en Bioquímica Clínica e Inmunología (CIBICI); Argentina
Fil: García Pedrajas, M. Dolores. Universidad de Málaga. Consejo Superior de Investigaciones Científicas (CSIC). Instituto de Hortofruticultura Subtropical y Mediterránea (IHSM); España
Fil: Dambolena, José Sebastián. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales; Argentina
Fil: Dambolena, José Sebastián. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto Multidisciplinario de Biología Vegetal (IMBIV); Argentina
Fuente
Environmental Microbiology 24 (8) : 1-35 (First published: 09 September 2022)
Materia
Evolution
Databases
Evolución
Bases de Datos
Mitoviridae
Kvinmitovirus
Putative Mitoviruses Assoc. With Animals
Public Databases
Mitoviruses
Nivel de accesibilidad
acceso restringido
Condiciones de uso
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
oai:localhost:20.500.12123/12895
Acceder
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oai_identifier_str oai:localhost:20.500.12123/12895
network_acronym_str INTADig
repository_id_str l
network_name_str INTA Digital (INTA)
spelling An in silico analysis revealed a novel evolutionary lineage of putative mitovirusesJacquat, Andrés GustavoUlla, Sofía BelénDebat, Humberto JulioMuñoz-Adalia, Emigdio JordánTheumer, Martín GustavoGarcía Pedrajas, M. DoloresDambolena, José SebastiánEvolutionDatabasesEvoluciónBases de DatosMitoviridaeKvinmitovirusPutative Mitoviruses Assoc. With AnimalsPublic DatabasesMitovirusesMitoviruses (family Mitoviridae) are small capsid-less RNA viruses that replicate in the mitochondria of fungi and plants. However, to date, the only authentic animal mitovirus infecting an insect was identified as Lutzomyia longipalpis mitovirus 1 (LulMV1). Public databases of transcriptomic studies from several animals may be a good source for identifying the often missed mitoviruses. Consequently, a search of mitovirus-like transcripts at the NCBI Transcriptome Shotgun Assembly (TSA) library, and a search for the mitoviruses previously recorded at the NCBI non-redundant (nr) protein sequences library, were performed in order to identify new mitovirus-like sequences associated with animals. In total, 10 new putative mitoviruses were identified in the TSA database, and 8 putative mitoviruses in the nr protein database. To our knowledge, these results represent the first evidence of putative mitoviruses associated with poriferan, cnidarians, echinoderms, crustaceans, myriapods and arachnids. According to different phylogenetic inferences using the maximum likelihood method, these 18 putative mitoviruses form a robust monophyletic lineage with LulMV1, the only known animal-infecting mitovirus. These findings based on in silico procedures provide strong evidence for the existence of a clade of putative mitoviruses associated with animals, which has been provisionally named “kvinmitovirus”.Instituto de Patología VegetalFil: Jacquat, Andrés Gustavo. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales; ArgentinaFil: Jacquat, Andrés Gustavo. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto Multidisciplinario de Biología Vegetal (IMBIV); ArgentinaFil: Ulla, Sofía Belén. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales; ArgentinaFil: Ulla, Sofía Belén. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto Multidisciplinario de Biología Vegetal (IMBIV); ArgentinaFil: Debat, Humberto Julio. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; ArgentinaFil: Debat, Humberto Julio. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); ArgentinaFil: Muñoz-Adalia, Emigdio Jordán. Forest Sciences Center of Catalonia; EspañaFil: Muñoz-Adalia, Emigdio Jordán. University of Lleida. Department of Crop and Forest Science; EspañaFil: Theumer, Martín Gustavo. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Departamento de Bioquímica Clínica; ArgentinaFil: Theumer, Martín Gustavo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones en Bioquímica Clínica e Inmunología (CIBICI); ArgentinaFil: García Pedrajas, M. Dolores. Universidad de Málaga. Consejo Superior de Investigaciones Científicas (CSIC). Instituto de Hortofruticultura Subtropical y Mediterránea (IHSM); EspañaFil: Dambolena, José Sebastián. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales; ArgentinaFil: Dambolena, José Sebastián. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto Multidisciplinario de Biología Vegetal (IMBIV); ArgentinaWileyinfo:eu-repo/date/embargoEnd/2023-09-162022-09-16T10:26:46Z2022-09-16T10:26:46Z2022-09-09info:eu-repo/semantics/articleinfo:eu-repo/semantics/acceptedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://hdl.handle.net/20.500.12123/12895https://sfamjournals.onlinelibrary.wiley.com/doi/10.1111/1462-2920.162021462-29121462-2920 (online)https://doi.org/10.1111/1462-2920.16202Environmental Microbiology 24 (8) : 1-35 (First published: 09 September 2022)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repo/semantics/restrictedAccess2025-09-29T13:45:43Zoai:localhost:20.500.12123/12895instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-09-29 13:45:43.909INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv An in silico analysis revealed a novel evolutionary lineage of putative mitoviruses
title An in silico analysis revealed a novel evolutionary lineage of putative mitoviruses
spellingShingle An in silico analysis revealed a novel evolutionary lineage of putative mitoviruses
Jacquat, Andrés Gustavo
Evolution
Databases
Evolución
Bases de Datos
Mitoviridae
Kvinmitovirus
Putative Mitoviruses Assoc. With Animals
Public Databases
Mitoviruses
title_short An in silico analysis revealed a novel evolutionary lineage of putative mitoviruses
title_full An in silico analysis revealed a novel evolutionary lineage of putative mitoviruses
title_fullStr An in silico analysis revealed a novel evolutionary lineage of putative mitoviruses
title_full_unstemmed An in silico analysis revealed a novel evolutionary lineage of putative mitoviruses
title_sort An in silico analysis revealed a novel evolutionary lineage of putative mitoviruses
dc.creator.none.fl_str_mv Jacquat, Andrés Gustavo
Ulla, Sofía Belén
Debat, Humberto Julio
Muñoz-Adalia, Emigdio Jordán
Theumer, Martín Gustavo
García Pedrajas, M. Dolores
Dambolena, José Sebastián
author Jacquat, Andrés Gustavo
author_facet Jacquat, Andrés Gustavo
Ulla, Sofía Belén
Debat, Humberto Julio
Muñoz-Adalia, Emigdio Jordán
Theumer, Martín Gustavo
García Pedrajas, M. Dolores
Dambolena, José Sebastián
author_role author
author2 Ulla, Sofía Belén
Debat, Humberto Julio
Muñoz-Adalia, Emigdio Jordán
Theumer, Martín Gustavo
García Pedrajas, M. Dolores
Dambolena, José Sebastián
author2_role author
author
author
author
author
author
dc.subject.none.fl_str_mv Evolution
Databases
Evolución
Bases de Datos
Mitoviridae
Kvinmitovirus
Putative Mitoviruses Assoc. With Animals
Public Databases
Mitoviruses
topic Evolution
Databases
Evolución
Bases de Datos
Mitoviridae
Kvinmitovirus
Putative Mitoviruses Assoc. With Animals
Public Databases
Mitoviruses
dc.description.none.fl_txt_mv Mitoviruses (family Mitoviridae) are small capsid-less RNA viruses that replicate in the mitochondria of fungi and plants. However, to date, the only authentic animal mitovirus infecting an insect was identified as Lutzomyia longipalpis mitovirus 1 (LulMV1). Public databases of transcriptomic studies from several animals may be a good source for identifying the often missed mitoviruses. Consequently, a search of mitovirus-like transcripts at the NCBI Transcriptome Shotgun Assembly (TSA) library, and a search for the mitoviruses previously recorded at the NCBI non-redundant (nr) protein sequences library, were performed in order to identify new mitovirus-like sequences associated with animals. In total, 10 new putative mitoviruses were identified in the TSA database, and 8 putative mitoviruses in the nr protein database. To our knowledge, these results represent the first evidence of putative mitoviruses associated with poriferan, cnidarians, echinoderms, crustaceans, myriapods and arachnids. According to different phylogenetic inferences using the maximum likelihood method, these 18 putative mitoviruses form a robust monophyletic lineage with LulMV1, the only known animal-infecting mitovirus. These findings based on in silico procedures provide strong evidence for the existence of a clade of putative mitoviruses associated with animals, which has been provisionally named “kvinmitovirus”.
Instituto de Patología Vegetal
Fil: Jacquat, Andrés Gustavo. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales; Argentina
Fil: Jacquat, Andrés Gustavo. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto Multidisciplinario de Biología Vegetal (IMBIV); Argentina
Fil: Ulla, Sofía Belén. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales; Argentina
Fil: Ulla, Sofía Belén. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto Multidisciplinario de Biología Vegetal (IMBIV); Argentina
Fil: Debat, Humberto Julio. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Debat, Humberto Julio. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Muñoz-Adalia, Emigdio Jordán. Forest Sciences Center of Catalonia; España
Fil: Muñoz-Adalia, Emigdio Jordán. University of Lleida. Department of Crop and Forest Science; España
Fil: Theumer, Martín Gustavo. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Departamento de Bioquímica Clínica; Argentina
Fil: Theumer, Martín Gustavo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones en Bioquímica Clínica e Inmunología (CIBICI); Argentina
Fil: García Pedrajas, M. Dolores. Universidad de Málaga. Consejo Superior de Investigaciones Científicas (CSIC). Instituto de Hortofruticultura Subtropical y Mediterránea (IHSM); España
Fil: Dambolena, José Sebastián. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales; Argentina
Fil: Dambolena, José Sebastián. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto Multidisciplinario de Biología Vegetal (IMBIV); Argentina
description Mitoviruses (family Mitoviridae) are small capsid-less RNA viruses that replicate in the mitochondria of fungi and plants. However, to date, the only authentic animal mitovirus infecting an insect was identified as Lutzomyia longipalpis mitovirus 1 (LulMV1). Public databases of transcriptomic studies from several animals may be a good source for identifying the often missed mitoviruses. Consequently, a search of mitovirus-like transcripts at the NCBI Transcriptome Shotgun Assembly (TSA) library, and a search for the mitoviruses previously recorded at the NCBI non-redundant (nr) protein sequences library, were performed in order to identify new mitovirus-like sequences associated with animals. In total, 10 new putative mitoviruses were identified in the TSA database, and 8 putative mitoviruses in the nr protein database. To our knowledge, these results represent the first evidence of putative mitoviruses associated with poriferan, cnidarians, echinoderms, crustaceans, myriapods and arachnids. According to different phylogenetic inferences using the maximum likelihood method, these 18 putative mitoviruses form a robust monophyletic lineage with LulMV1, the only known animal-infecting mitovirus. These findings based on in silico procedures provide strong evidence for the existence of a clade of putative mitoviruses associated with animals, which has been provisionally named “kvinmitovirus”.
publishDate 2022
dc.date.none.fl_str_mv 2022-09-16T10:26:46Z
2022-09-16T10:26:46Z
2022-09-09
info:eu-repo/date/embargoEnd/2023-09-16
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/acceptedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str acceptedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12123/12895
https://sfamjournals.onlinelibrary.wiley.com/doi/10.1111/1462-2920.16202
1462-2912
1462-2920 (online)
https://doi.org/10.1111/1462-2920.16202
url http://hdl.handle.net/20.500.12123/12895
https://sfamjournals.onlinelibrary.wiley.com/doi/10.1111/1462-2920.16202
https://doi.org/10.1111/1462-2920.16202
identifier_str_mv 1462-2912
1462-2920 (online)
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/restrictedAccess
eu_rights_str_mv restrictedAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Wiley
publisher.none.fl_str_mv Wiley
dc.source.none.fl_str_mv Environmental Microbiology 24 (8) : 1-35 (First published: 09 September 2022)
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
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