Soil-borne phytopathogen and bacterial biocontrol agents using mining tools. The pathosystem phytophthora sp-Olea europea - Bacillus sp.

Autores
Rossi, Maria Sol; Casas, Roberto Raul; Michelena, Roberto; Perez, Beatriz Alida
Año de publicación
2010
Idioma
inglés
Tipo de recurso
documento de conferencia
Estado
versión publicada
Descripción
Beneficial (e.g. biocontrol mycorrhizal and rhizobial symbioses, nutrient transformation and uptake) and harmful (e.g. phytopathogens, inorganic, phytoxicity, nutrient immobilization (climate change induced stress) interaction and their manipulation are of great topical interest. Phitophthora is a soil-borne pathogen against a great plant host number. We aimed phytophthora pathogen of Olea europaea. Using data mining tools we obtained information from large data bases as EML (Europe); DJJB (Japan) and GenBank (USA). Internal transcripted spacer (IGS) are regions of the DNA used to study taxonomic information in eucariota organisms because of this they are highly conserved in the evolution. Ribosomal 165 DNA was used to obtain taxonomic information about biocontrol bacteria. In our we looking for the relation ship between a large number of Phitophhora IBS and ITS sequences deposited into larges databases and the type and place of plant infected. We obtained information about the relationship that exidst between pathogenicity related to geographical point respect to pathosistem Phithothora sp against Olea europaea L. among unsupervised learning hierarchicqal clustering we obtained a clssification from ITS and IGS sequences.
Instituto de Suelos
Fil: Rossi, María Sol. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Suelos; Argentina
Fil: Casas, Roberto Raúl. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Suelos; Argentina
Fil: Michelena, Roberto Oscar. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Suelos; Argentina
Fil: Pérez, Beatriz A. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Microbiología y Zoología Agrícola, Argentina
Fuente
19th. World Congress of Soil Science, Brisbane, Australia. 1 - 6 august, 2010
Materia
Data Mining
Minería de Datos
Phytophthora
Olea europaea
Clustering
Agrupamiento
ITS
IGS
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
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Acceder
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oai_identifier_str oai:localhost:20.500.12123/18113
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spelling Soil-borne phytopathogen and bacterial biocontrol agents using mining tools. The pathosystem phytophthora sp-Olea europea - Bacillus sp.Rossi, Maria SolCasas, Roberto RaulMichelena, RobertoPerez, Beatriz AlidaData MiningMinería de DatosPhytophthoraOlea europaeaClusteringAgrupamientoITSIGSBeneficial (e.g. biocontrol mycorrhizal and rhizobial symbioses, nutrient transformation and uptake) and harmful (e.g. phytopathogens, inorganic, phytoxicity, nutrient immobilization (climate change induced stress) interaction and their manipulation are of great topical interest. Phitophthora is a soil-borne pathogen against a great plant host number. We aimed phytophthora pathogen of Olea europaea. Using data mining tools we obtained information from large data bases as EML (Europe); DJJB (Japan) and GenBank (USA). Internal transcripted spacer (IGS) are regions of the DNA used to study taxonomic information in eucariota organisms because of this they are highly conserved in the evolution. Ribosomal 165 DNA was used to obtain taxonomic information about biocontrol bacteria. In our we looking for the relation ship between a large number of Phitophhora IBS and ITS sequences deposited into larges databases and the type and place of plant infected. We obtained information about the relationship that exidst between pathogenicity related to geographical point respect to pathosistem Phithothora sp against Olea europaea L. among unsupervised learning hierarchicqal clustering we obtained a clssification from ITS and IGS sequences.Instituto de SuelosFil: Rossi, María Sol. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Suelos; ArgentinaFil: Casas, Roberto Raúl. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Suelos; ArgentinaFil: Michelena, Roberto Oscar. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Suelos; ArgentinaFil: Pérez, Beatriz A. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Microbiología y Zoología Agrícola, ArgentinaAustralian Society of Soil Science2024-06-11T12:37:40Z2024-06-11T12:37:40Z2010-08-01info:eu-repo/semantics/conferenceObjectinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_5794info:ar-repo/semantics/documentoDeConferenciaapplication/pdfhttp://hdl.handle.net/20.500.12123/1811319th. World Congress of Soil Science, Brisbane, Australia. 1 - 6 august, 2010reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)2025-10-16T09:31:40Zoai:localhost:20.500.12123/18113instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-10-16 09:31:40.64INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv Soil-borne phytopathogen and bacterial biocontrol agents using mining tools. The pathosystem phytophthora sp-Olea europea - Bacillus sp.
title Soil-borne phytopathogen and bacterial biocontrol agents using mining tools. The pathosystem phytophthora sp-Olea europea - Bacillus sp.
spellingShingle Soil-borne phytopathogen and bacterial biocontrol agents using mining tools. The pathosystem phytophthora sp-Olea europea - Bacillus sp.
Rossi, Maria Sol
Data Mining
Minería de Datos
Phytophthora
Olea europaea
Clustering
Agrupamiento
ITS
IGS
title_short Soil-borne phytopathogen and bacterial biocontrol agents using mining tools. The pathosystem phytophthora sp-Olea europea - Bacillus sp.
title_full Soil-borne phytopathogen and bacterial biocontrol agents using mining tools. The pathosystem phytophthora sp-Olea europea - Bacillus sp.
title_fullStr Soil-borne phytopathogen and bacterial biocontrol agents using mining tools. The pathosystem phytophthora sp-Olea europea - Bacillus sp.
title_full_unstemmed Soil-borne phytopathogen and bacterial biocontrol agents using mining tools. The pathosystem phytophthora sp-Olea europea - Bacillus sp.
title_sort Soil-borne phytopathogen and bacterial biocontrol agents using mining tools. The pathosystem phytophthora sp-Olea europea - Bacillus sp.
dc.creator.none.fl_str_mv Rossi, Maria Sol
Casas, Roberto Raul
Michelena, Roberto
Perez, Beatriz Alida
author Rossi, Maria Sol
author_facet Rossi, Maria Sol
Casas, Roberto Raul
Michelena, Roberto
Perez, Beatriz Alida
author_role author
author2 Casas, Roberto Raul
Michelena, Roberto
Perez, Beatriz Alida
author2_role author
author
author
dc.subject.none.fl_str_mv Data Mining
Minería de Datos
Phytophthora
Olea europaea
Clustering
Agrupamiento
ITS
IGS
topic Data Mining
Minería de Datos
Phytophthora
Olea europaea
Clustering
Agrupamiento
ITS
IGS
dc.description.none.fl_txt_mv Beneficial (e.g. biocontrol mycorrhizal and rhizobial symbioses, nutrient transformation and uptake) and harmful (e.g. phytopathogens, inorganic, phytoxicity, nutrient immobilization (climate change induced stress) interaction and their manipulation are of great topical interest. Phitophthora is a soil-borne pathogen against a great plant host number. We aimed phytophthora pathogen of Olea europaea. Using data mining tools we obtained information from large data bases as EML (Europe); DJJB (Japan) and GenBank (USA). Internal transcripted spacer (IGS) are regions of the DNA used to study taxonomic information in eucariota organisms because of this they are highly conserved in the evolution. Ribosomal 165 DNA was used to obtain taxonomic information about biocontrol bacteria. In our we looking for the relation ship between a large number of Phitophhora IBS and ITS sequences deposited into larges databases and the type and place of plant infected. We obtained information about the relationship that exidst between pathogenicity related to geographical point respect to pathosistem Phithothora sp against Olea europaea L. among unsupervised learning hierarchicqal clustering we obtained a clssification from ITS and IGS sequences.
Instituto de Suelos
Fil: Rossi, María Sol. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Suelos; Argentina
Fil: Casas, Roberto Raúl. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Suelos; Argentina
Fil: Michelena, Roberto Oscar. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Suelos; Argentina
Fil: Pérez, Beatriz A. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Microbiología y Zoología Agrícola, Argentina
description Beneficial (e.g. biocontrol mycorrhizal and rhizobial symbioses, nutrient transformation and uptake) and harmful (e.g. phytopathogens, inorganic, phytoxicity, nutrient immobilization (climate change induced stress) interaction and their manipulation are of great topical interest. Phitophthora is a soil-borne pathogen against a great plant host number. We aimed phytophthora pathogen of Olea europaea. Using data mining tools we obtained information from large data bases as EML (Europe); DJJB (Japan) and GenBank (USA). Internal transcripted spacer (IGS) are regions of the DNA used to study taxonomic information in eucariota organisms because of this they are highly conserved in the evolution. Ribosomal 165 DNA was used to obtain taxonomic information about biocontrol bacteria. In our we looking for the relation ship between a large number of Phitophhora IBS and ITS sequences deposited into larges databases and the type and place of plant infected. We obtained information about the relationship that exidst between pathogenicity related to geographical point respect to pathosistem Phithothora sp against Olea europaea L. among unsupervised learning hierarchicqal clustering we obtained a clssification from ITS and IGS sequences.
publishDate 2010
dc.date.none.fl_str_mv 2010-08-01
2024-06-11T12:37:40Z
2024-06-11T12:37:40Z
dc.type.none.fl_str_mv info:eu-repo/semantics/conferenceObject
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_5794
info:ar-repo/semantics/documentoDeConferencia
format conferenceObject
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12123/18113
url http://hdl.handle.net/20.500.12123/18113
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Australian Society of Soil Science
publisher.none.fl_str_mv Australian Society of Soil Science
dc.source.none.fl_str_mv 19th. World Congress of Soil Science, Brisbane, Australia. 1 - 6 august, 2010
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
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score 12.712165

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