Maize Nitrogen Use Efficiency: QTL Mapping in a U.S. Dent x Argentine-Caribbean Flint RILs population

Autores
Mandolino, Cecilia Ines; D'Andrea, Karina Elizabeth; Olmos, Sofía Eugenia; Otegui, María Elena; Eyherabide, Guillermo
Año de publicación
2018
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
This study was aimed to identify quantitative trait loci (QTL) for nitrogen use efficiency (NUE) and related traits in a maize population derived from a cross between two lines with different genetic background (B100 and LP2). Recombinant inbred lines (181) from this population were evaluated under field conditions during two growing seasons, and significant (P < 0.01) phenotypic and genotypic variability was detected for most evaluated traits. Two different mapping methods were applied for detecting QTLs. Firstly, a trait by trait approach was performed on across environments, and 19 QTLs were identified. Secondly, a multi-trait multi-environment analysis detected seven joint QTLs. Almost all joint QTLs had inconsistent additive effects from one environment to another, which would reflect presence of QTL × Environment interaction. Most joint QTLs co-localized with QTLs detected by individual mapping. We detected consistent additive effects for grain yield per plant and NUE, as well as for biomass and nitrogen harvest index in some joint QTLs, especially QTL-1 and QTL-6. These QTLs had positive and stable effects across environments, and presence of some genes within these QTL intervals could be relevant for selecting for both NUE and grain yield simultaneously. Up today, this is a first report on the co-localization of QTLs for enhanced allocation of biomass allocation to grains with NUE, and NUE candidate gene identification. Fine mapping of these regions could allow to detect additional markers more closely linked to these QTLs that could be used for marker assisted selection for NUE.
EEA Pergamino
Fil: Mandolino, Cecilia. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Laboratorio Biotecnología; Argentina. Universidad Nacional Noroeste de Buenos Aires. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires (CIT NOBA); Argentina.
Fil: D'Andrea, Karina Elizabeth. Consejo Nacional de Investigaciones, Científicas y Técnicas - Universidad de Buenos Aires. Facultad de Agronomía (CONICET- FAUBA); Argentina.
Fil: Olmos, Sofía. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento Agronomía; Argentina.
Fil: Mandolino, Cecilia. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Laboratorio Biotecnología; Argentina.
Fil: Otegui, María. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Ecofisiología; Argentina. Consejo Nacional de Investigaciones, Científicas y Técnicas - Universidad de Buenos Aires. Facultad de Agronomía (CONICET- FAUBA); Argentina.
Fil: Eyhérabide, Guillermo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Laboratorio Biotecnología; Argentina. Universidad Nacional Noroeste de Buenos Aires. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires (CIT NOBA); Argentina.
Fuente
Maydica : a journal devoted to maize and allied species 63 (1) : 1-16. (2018)
Materia
Maíz
Maize
Nitrógeno
Nitrogen
Genética
Genetics
Loci de Rasgos Cuantitativos
Quantitative Trait Loci
Eficiencia de uso de nitrógeno
QTL
Estados Unidos
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
oai:localhost:20.500.12123/3088

id INTADig_a39e41a2f7732514b594d1437115f79b
oai_identifier_str oai:localhost:20.500.12123/3088
network_acronym_str INTADig
repository_id_str l
network_name_str INTA Digital (INTA)
spelling Maize Nitrogen Use Efficiency: QTL Mapping in a U.S. Dent x Argentine-Caribbean Flint RILs populationMandolino, Cecilia InesD'Andrea, Karina ElizabethOlmos, Sofía EugeniaOtegui, María ElenaEyherabide, GuillermoMaízMaizeNitrógenoNitrogenGenéticaGeneticsLoci de Rasgos CuantitativosQuantitative Trait LociEficiencia de uso de nitrógenoQTLEstados UnidosThis study was aimed to identify quantitative trait loci (QTL) for nitrogen use efficiency (NUE) and related traits in a maize population derived from a cross between two lines with different genetic background (B100 and LP2). Recombinant inbred lines (181) from this population were evaluated under field conditions during two growing seasons, and significant (P < 0.01) phenotypic and genotypic variability was detected for most evaluated traits. Two different mapping methods were applied for detecting QTLs. Firstly, a trait by trait approach was performed on across environments, and 19 QTLs were identified. Secondly, a multi-trait multi-environment analysis detected seven joint QTLs. Almost all joint QTLs had inconsistent additive effects from one environment to another, which would reflect presence of QTL × Environment interaction. Most joint QTLs co-localized with QTLs detected by individual mapping. We detected consistent additive effects for grain yield per plant and NUE, as well as for biomass and nitrogen harvest index in some joint QTLs, especially QTL-1 and QTL-6. These QTLs had positive and stable effects across environments, and presence of some genes within these QTL intervals could be relevant for selecting for both NUE and grain yield simultaneously. Up today, this is a first report on the co-localization of QTLs for enhanced allocation of biomass allocation to grains with NUE, and NUE candidate gene identification. Fine mapping of these regions could allow to detect additional markers more closely linked to these QTLs that could be used for marker assisted selection for NUE.EEA PergaminoFil: Mandolino, Cecilia. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Laboratorio Biotecnología; Argentina. Universidad Nacional Noroeste de Buenos Aires. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires (CIT NOBA); Argentina.Fil: D'Andrea, Karina Elizabeth. Consejo Nacional de Investigaciones, Científicas y Técnicas - Universidad de Buenos Aires. Facultad de Agronomía (CONICET- FAUBA); Argentina.Fil: Olmos, Sofía. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento Agronomía; Argentina.Fil: Mandolino, Cecilia. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Laboratorio Biotecnología; Argentina.Fil: Otegui, María. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Ecofisiología; Argentina. Consejo Nacional de Investigaciones, Científicas y Técnicas - Universidad de Buenos Aires. Facultad de Agronomía (CONICET- FAUBA); Argentina.Fil: Eyhérabide, Guillermo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Laboratorio Biotecnología; Argentina. Universidad Nacional Noroeste de Buenos Aires. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires (CIT NOBA); Argentina.2018-08-15T17:17:56Z2018-08-15T17:17:56Z2018-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttps://journals-crea.4science.it/index.php/maydica/article/view/1594/1097http://hdl.handle.net/20.500.12123/30882279-8013Maydica : a journal devoted to maize and allied species 63 (1) : 1-16. (2018)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)2025-09-11T10:22:29Zoai:localhost:20.500.12123/3088instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-09-11 10:22:29.711INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv Maize Nitrogen Use Efficiency: QTL Mapping in a U.S. Dent x Argentine-Caribbean Flint RILs population
title Maize Nitrogen Use Efficiency: QTL Mapping in a U.S. Dent x Argentine-Caribbean Flint RILs population
spellingShingle Maize Nitrogen Use Efficiency: QTL Mapping in a U.S. Dent x Argentine-Caribbean Flint RILs population
Mandolino, Cecilia Ines
Maíz
Maize
Nitrógeno
Nitrogen
Genética
Genetics
Loci de Rasgos Cuantitativos
Quantitative Trait Loci
Eficiencia de uso de nitrógeno
QTL
Estados Unidos
title_short Maize Nitrogen Use Efficiency: QTL Mapping in a U.S. Dent x Argentine-Caribbean Flint RILs population
title_full Maize Nitrogen Use Efficiency: QTL Mapping in a U.S. Dent x Argentine-Caribbean Flint RILs population
title_fullStr Maize Nitrogen Use Efficiency: QTL Mapping in a U.S. Dent x Argentine-Caribbean Flint RILs population
title_full_unstemmed Maize Nitrogen Use Efficiency: QTL Mapping in a U.S. Dent x Argentine-Caribbean Flint RILs population
title_sort Maize Nitrogen Use Efficiency: QTL Mapping in a U.S. Dent x Argentine-Caribbean Flint RILs population
dc.creator.none.fl_str_mv Mandolino, Cecilia Ines
D'Andrea, Karina Elizabeth
Olmos, Sofía Eugenia
Otegui, María Elena
Eyherabide, Guillermo
author Mandolino, Cecilia Ines
author_facet Mandolino, Cecilia Ines
D'Andrea, Karina Elizabeth
Olmos, Sofía Eugenia
Otegui, María Elena
Eyherabide, Guillermo
author_role author
author2 D'Andrea, Karina Elizabeth
Olmos, Sofía Eugenia
Otegui, María Elena
Eyherabide, Guillermo
author2_role author
author
author
author
dc.subject.none.fl_str_mv Maíz
Maize
Nitrógeno
Nitrogen
Genética
Genetics
Loci de Rasgos Cuantitativos
Quantitative Trait Loci
Eficiencia de uso de nitrógeno
QTL
Estados Unidos
topic Maíz
Maize
Nitrógeno
Nitrogen
Genética
Genetics
Loci de Rasgos Cuantitativos
Quantitative Trait Loci
Eficiencia de uso de nitrógeno
QTL
Estados Unidos
dc.description.none.fl_txt_mv This study was aimed to identify quantitative trait loci (QTL) for nitrogen use efficiency (NUE) and related traits in a maize population derived from a cross between two lines with different genetic background (B100 and LP2). Recombinant inbred lines (181) from this population were evaluated under field conditions during two growing seasons, and significant (P < 0.01) phenotypic and genotypic variability was detected for most evaluated traits. Two different mapping methods were applied for detecting QTLs. Firstly, a trait by trait approach was performed on across environments, and 19 QTLs were identified. Secondly, a multi-trait multi-environment analysis detected seven joint QTLs. Almost all joint QTLs had inconsistent additive effects from one environment to another, which would reflect presence of QTL × Environment interaction. Most joint QTLs co-localized with QTLs detected by individual mapping. We detected consistent additive effects for grain yield per plant and NUE, as well as for biomass and nitrogen harvest index in some joint QTLs, especially QTL-1 and QTL-6. These QTLs had positive and stable effects across environments, and presence of some genes within these QTL intervals could be relevant for selecting for both NUE and grain yield simultaneously. Up today, this is a first report on the co-localization of QTLs for enhanced allocation of biomass allocation to grains with NUE, and NUE candidate gene identification. Fine mapping of these regions could allow to detect additional markers more closely linked to these QTLs that could be used for marker assisted selection for NUE.
EEA Pergamino
Fil: Mandolino, Cecilia. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Laboratorio Biotecnología; Argentina. Universidad Nacional Noroeste de Buenos Aires. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires (CIT NOBA); Argentina.
Fil: D'Andrea, Karina Elizabeth. Consejo Nacional de Investigaciones, Científicas y Técnicas - Universidad de Buenos Aires. Facultad de Agronomía (CONICET- FAUBA); Argentina.
Fil: Olmos, Sofía. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento Agronomía; Argentina.
Fil: Mandolino, Cecilia. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Laboratorio Biotecnología; Argentina.
Fil: Otegui, María. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Ecofisiología; Argentina. Consejo Nacional de Investigaciones, Científicas y Técnicas - Universidad de Buenos Aires. Facultad de Agronomía (CONICET- FAUBA); Argentina.
Fil: Eyhérabide, Guillermo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Departamento de Laboratorio Biotecnología; Argentina. Universidad Nacional Noroeste de Buenos Aires. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires (CIT NOBA); Argentina.
description This study was aimed to identify quantitative trait loci (QTL) for nitrogen use efficiency (NUE) and related traits in a maize population derived from a cross between two lines with different genetic background (B100 and LP2). Recombinant inbred lines (181) from this population were evaluated under field conditions during two growing seasons, and significant (P < 0.01) phenotypic and genotypic variability was detected for most evaluated traits. Two different mapping methods were applied for detecting QTLs. Firstly, a trait by trait approach was performed on across environments, and 19 QTLs were identified. Secondly, a multi-trait multi-environment analysis detected seven joint QTLs. Almost all joint QTLs had inconsistent additive effects from one environment to another, which would reflect presence of QTL × Environment interaction. Most joint QTLs co-localized with QTLs detected by individual mapping. We detected consistent additive effects for grain yield per plant and NUE, as well as for biomass and nitrogen harvest index in some joint QTLs, especially QTL-1 and QTL-6. These QTLs had positive and stable effects across environments, and presence of some genes within these QTL intervals could be relevant for selecting for both NUE and grain yield simultaneously. Up today, this is a first report on the co-localization of QTLs for enhanced allocation of biomass allocation to grains with NUE, and NUE candidate gene identification. Fine mapping of these regions could allow to detect additional markers more closely linked to these QTLs that could be used for marker assisted selection for NUE.
publishDate 2018
dc.date.none.fl_str_mv 2018-08-15T17:17:56Z
2018-08-15T17:17:56Z
2018-04
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://journals-crea.4science.it/index.php/maydica/article/view/1594/1097
http://hdl.handle.net/20.500.12123/3088
2279-8013
url https://journals-crea.4science.it/index.php/maydica/article/view/1594/1097
http://hdl.handle.net/20.500.12123/3088
identifier_str_mv 2279-8013
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv Maydica : a journal devoted to maize and allied species 63 (1) : 1-16. (2018)
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
_version_ 1842975471126446080
score 12.993085