A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation
- Autores
- Cavagnaro, Pablo; Iorizzo, Massimo; Yildiz, Mehtap; Senalik, Douglas A.; Parsons, Joshua; Ellison, Shelby L.; Simon, Philipp W.
- Año de publicación
- 2014
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Purple carrots accumulate large quantities of anthocyanins in their roots and leaves. These flavonoid pigments possess antioxidant activity and are implicated in providing health benefits. Informative, saturated linkage maps associated with well characterized populations segregating for anthocyanin pigmentation have not been developed. To investigate the genetic architecture conditioning anthocyanin pigmentation we scored root color visually, quantified root anthocyanin pigments by high performance liquid chromatography in segregating F2, F3 and F4 generations of a mapping population, mapped quantitative trait loci (QTL) onto a dense gene-derived single nucleotide polymorphism (SNP)-based linkage map, and performed comparative trait mapping with two unrelated populations.
EEA La Consulta
Fil: Cavagnaro, Pablo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria La Consulta; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias; Argentina. University of Wisconsin. Department of Horticulture; Estados Unidos
Fil: Iorizzo, Massimo. University of Wisconsin. Department of Horticulture; Estados Unidos.
Fil: Yildiz, Mehtap. Yuzuncu Yil University. Faculty of Agriculture. Department of Agricultural Biotechnology; Turquía
Fil: Senalik, Douglas. University of Wisconsin. Department of Horticulture; Estados Unidos. United States Department of Agriculture–Agricultural Research Service. Vegetable Crops Research Unit; Estados Unidos
Fil: Parsons, Joshua. University of Wisconsin. Department of Horticulture; Estados Unidos
Fil: Ellison, Shelby. University of Wisconsin. Department of Horticulture; Estados Unidos
Fil: Simon, Philipp. University of Wisconsin. Department of Horticulture; Estados Unidos. United States Department of Agriculture–Agricultural Research Service. Vegetable Crops Research Unit; Estados Unidos - Fuente
- BMC Genomics 15 : 1118 (December 2014)
- Materia
-
Zanahoria
Genomas
Loci de Rasgos Cuantitativos
Antocianinas
Pigmentación
Carrots
Genomes
Quantitative Trait Loci
Anthocyanins
Pigmentation
QTL - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- http://creativecommons.org/licenses/by-nc-sa/4.0/
- Repositorio
- Institución
- Instituto Nacional de Tecnología Agropecuaria
- OAI Identificador
- oai:localhost:20.500.12123/2084
Ver los metadatos del registro completo
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A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentationCavagnaro, PabloIorizzo, MassimoYildiz, MehtapSenalik, Douglas A.Parsons, JoshuaEllison, Shelby L.Simon, Philipp W.ZanahoriaGenomasLoci de Rasgos CuantitativosAntocianinasPigmentaciónCarrotsGenomesQuantitative Trait LociAnthocyaninsPigmentationQTLPurple carrots accumulate large quantities of anthocyanins in their roots and leaves. These flavonoid pigments possess antioxidant activity and are implicated in providing health benefits. Informative, saturated linkage maps associated with well characterized populations segregating for anthocyanin pigmentation have not been developed. To investigate the genetic architecture conditioning anthocyanin pigmentation we scored root color visually, quantified root anthocyanin pigments by high performance liquid chromatography in segregating F2, F3 and F4 generations of a mapping population, mapped quantitative trait loci (QTL) onto a dense gene-derived single nucleotide polymorphism (SNP)-based linkage map, and performed comparative trait mapping with two unrelated populations.EEA La ConsultaFil: Cavagnaro, Pablo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria La Consulta; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias; Argentina. University of Wisconsin. Department of Horticulture; Estados UnidosFil: Iorizzo, Massimo. University of Wisconsin. Department of Horticulture; Estados Unidos.Fil: Yildiz, Mehtap. Yuzuncu Yil University. Faculty of Agriculture. Department of Agricultural Biotechnology; TurquíaFil: Senalik, Douglas. University of Wisconsin. Department of Horticulture; Estados Unidos. United States Department of Agriculture–Agricultural Research Service. Vegetable Crops Research Unit; Estados UnidosFil: Parsons, Joshua. University of Wisconsin. Department of Horticulture; Estados UnidosFil: Ellison, Shelby. University of Wisconsin. Department of Horticulture; Estados UnidosFil: Simon, Philipp. University of Wisconsin. Department of Horticulture; Estados Unidos. United States Department of Agriculture–Agricultural Research Service. Vegetable Crops Research Unit; Estados Unidos2018-03-20T14:35:13Z2018-03-20T14:35:13Z2014-12info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttps://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-15-1118http://hdl.handle.net/20.500.12123/20841471-2164https://doi.org/10.1186/1471-2164-15-1118BMC Genomics 15 : 1118 (December 2014)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)2025-09-04T09:47:10Zoai:localhost:20.500.12123/2084instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-09-04 09:47:11.123INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse |
dc.title.none.fl_str_mv |
A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
title |
A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
spellingShingle |
A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation Cavagnaro, Pablo Zanahoria Genomas Loci de Rasgos Cuantitativos Antocianinas Pigmentación Carrots Genomes Quantitative Trait Loci Anthocyanins Pigmentation QTL |
title_short |
A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
title_full |
A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
title_fullStr |
A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
title_full_unstemmed |
A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
title_sort |
A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation |
dc.creator.none.fl_str_mv |
Cavagnaro, Pablo Iorizzo, Massimo Yildiz, Mehtap Senalik, Douglas A. Parsons, Joshua Ellison, Shelby L. Simon, Philipp W. |
author |
Cavagnaro, Pablo |
author_facet |
Cavagnaro, Pablo Iorizzo, Massimo Yildiz, Mehtap Senalik, Douglas A. Parsons, Joshua Ellison, Shelby L. Simon, Philipp W. |
author_role |
author |
author2 |
Iorizzo, Massimo Yildiz, Mehtap Senalik, Douglas A. Parsons, Joshua Ellison, Shelby L. Simon, Philipp W. |
author2_role |
author author author author author author |
dc.subject.none.fl_str_mv |
Zanahoria Genomas Loci de Rasgos Cuantitativos Antocianinas Pigmentación Carrots Genomes Quantitative Trait Loci Anthocyanins Pigmentation QTL |
topic |
Zanahoria Genomas Loci de Rasgos Cuantitativos Antocianinas Pigmentación Carrots Genomes Quantitative Trait Loci Anthocyanins Pigmentation QTL |
dc.description.none.fl_txt_mv |
Purple carrots accumulate large quantities of anthocyanins in their roots and leaves. These flavonoid pigments possess antioxidant activity and are implicated in providing health benefits. Informative, saturated linkage maps associated with well characterized populations segregating for anthocyanin pigmentation have not been developed. To investigate the genetic architecture conditioning anthocyanin pigmentation we scored root color visually, quantified root anthocyanin pigments by high performance liquid chromatography in segregating F2, F3 and F4 generations of a mapping population, mapped quantitative trait loci (QTL) onto a dense gene-derived single nucleotide polymorphism (SNP)-based linkage map, and performed comparative trait mapping with two unrelated populations. EEA La Consulta Fil: Cavagnaro, Pablo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria La Consulta; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias; Argentina. University of Wisconsin. Department of Horticulture; Estados Unidos Fil: Iorizzo, Massimo. University of Wisconsin. Department of Horticulture; Estados Unidos. Fil: Yildiz, Mehtap. Yuzuncu Yil University. Faculty of Agriculture. Department of Agricultural Biotechnology; Turquía Fil: Senalik, Douglas. University of Wisconsin. Department of Horticulture; Estados Unidos. United States Department of Agriculture–Agricultural Research Service. Vegetable Crops Research Unit; Estados Unidos Fil: Parsons, Joshua. University of Wisconsin. Department of Horticulture; Estados Unidos Fil: Ellison, Shelby. University of Wisconsin. Department of Horticulture; Estados Unidos Fil: Simon, Philipp. University of Wisconsin. Department of Horticulture; Estados Unidos. United States Department of Agriculture–Agricultural Research Service. Vegetable Crops Research Unit; Estados Unidos |
description |
Purple carrots accumulate large quantities of anthocyanins in their roots and leaves. These flavonoid pigments possess antioxidant activity and are implicated in providing health benefits. Informative, saturated linkage maps associated with well characterized populations segregating for anthocyanin pigmentation have not been developed. To investigate the genetic architecture conditioning anthocyanin pigmentation we scored root color visually, quantified root anthocyanin pigments by high performance liquid chromatography in segregating F2, F3 and F4 generations of a mapping population, mapped quantitative trait loci (QTL) onto a dense gene-derived single nucleotide polymorphism (SNP)-based linkage map, and performed comparative trait mapping with two unrelated populations. |
publishDate |
2014 |
dc.date.none.fl_str_mv |
2014-12 2018-03-20T14:35:13Z 2018-03-20T14:35:13Z |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-15-1118 http://hdl.handle.net/20.500.12123/2084 1471-2164 https://doi.org/10.1186/1471-2164-15-1118 |
url |
https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-15-1118 http://hdl.handle.net/20.500.12123/2084 https://doi.org/10.1186/1471-2164-15-1118 |
identifier_str_mv |
1471-2164 |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by-nc-sa/4.0/ Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by-nc-sa/4.0/ Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
BMC Genomics 15 : 1118 (December 2014) reponame:INTA Digital (INTA) instname:Instituto Nacional de Tecnología Agropecuaria |
reponame_str |
INTA Digital (INTA) |
collection |
INTA Digital (INTA) |
instname_str |
Instituto Nacional de Tecnología Agropecuaria |
repository.name.fl_str_mv |
INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria |
repository.mail.fl_str_mv |
tripaldi.nicolas@inta.gob.ar |
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