Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co- occurring in oases of the Atacama Desert (northern Chile)

Autores
Bessega, Cecilia; Pometti, Carolina; Fortunato, Renee Hersilia; Greene, Francisca; Santoro, Calogero M.; McRostie, Virginia
Año de publicación
2021
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
In the Atacama Desert from northern Chile (19– 24°S), Prosopis (Leguminosae) individuals are restricted to oases that are unevenly distributed and isolated from each other by large stretches of barren landscape constituting an interesting study model as the degree of connectivity between natural populations depends on their dispersal capacity and the barriers imposed by the landscape. Our goal was to assess the genetic diversity and the degree of differentiation among groups of Prosopis individuals of different species from Section Algarobia and putative hybrids (hereafter populations) co- occurring in these isolated oases from the Atacama Desert and determine whether genetic patterns are associated with dispersal barriers. Thirteen populations were sampled from oases located on three hydrographic basins (Pampa del Tamarugal, Rio Loa, and Salar de Atacama; northern, central, and southern basins, respectively). Individuals genotyped by eight SSRs show high levels of genetic diversity (HO = 0.61, Ar = 3.5) and low but significant genetic differentiation among populations (FST = 0.128, FST- ENA = 0.129, DJOST = 0.238). The AMOVA indicates that most of the variation occurs within individuals (79%) and from the variance among individuals (21%); almost, the same variation can be found between basins and between populations within basins. Differentiation and structure results were not associated with the basins, retrieving up to four genetic clusters and certain admixture in the central populations. Pairwise differentiation comparisons among populations showed inconsistencies considering their distribution throughout the basins. Genetic and geographic distances were significantly correlated at global and within the basins considered (p < .02), but low correlation indices were obtained (r < .37). These results are discussed in relation to the fragmented landscape, considering both natural and non- natural (humans) dispersal agents that may be moving Prosopis in the Atacama Desert.
Fil: Bessega, Cecilia. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Ecología, Génetica y Evolución. Instituto de Ecología, Genética y Evolución; Argentina
Fil: Pometti, Carolina. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Ecología, Génetica y Evolución. Instituto de Ecología, Genética y Evolución; Argentina
Fil: Fortunato, Renee Hersilia. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Recursos Biológicos; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad de Morón. Facultad de Agronomía y Ciencias Agroalimentarias; Argentina
Fil: Greene, Francisca. San Pedro de Atacama, Chile
Fil: Santoro, Calogero M. Universidad de Tarapacá. Instituto de Alta Investigación; Chile
Fil: McRostie, Virginia. Pontificia Universidad Católica de Chile. Facultad de Ciencias Sociales. Escuela de Antropología. Centro del Desierto de Atacama; Chile
Fuente
Ecology & Evolution 11 (5) : 2375-2390 (March 2021)
Materia
Ceratonia siliqua
Diversidad Genética
Microsatélites
Estructura
Genetic Diversity
Structure
Microsatellites
Chile
Prosopis
Factores Sociocultural
Sociocultural Factors
Desierto de Atacama, Chile
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
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network_name_str INTA Digital (INTA)
spelling Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co- occurring in oases of the Atacama Desert (northern Chile)Bessega, CeciliaPometti, CarolinaFortunato, Renee HersiliaGreene, FranciscaSantoro, Calogero M.McRostie, VirginiaCeratonia siliquaDiversidad GenéticaMicrosatélitesEstructuraGenetic DiversityStructureMicrosatellitesChileProsopisFactores SocioculturalSociocultural FactorsDesierto de Atacama, ChileIn the Atacama Desert from northern Chile (19– 24°S), Prosopis (Leguminosae) individuals are restricted to oases that are unevenly distributed and isolated from each other by large stretches of barren landscape constituting an interesting study model as the degree of connectivity between natural populations depends on their dispersal capacity and the barriers imposed by the landscape. Our goal was to assess the genetic diversity and the degree of differentiation among groups of Prosopis individuals of different species from Section Algarobia and putative hybrids (hereafter populations) co- occurring in these isolated oases from the Atacama Desert and determine whether genetic patterns are associated with dispersal barriers. Thirteen populations were sampled from oases located on three hydrographic basins (Pampa del Tamarugal, Rio Loa, and Salar de Atacama; northern, central, and southern basins, respectively). Individuals genotyped by eight SSRs show high levels of genetic diversity (HO = 0.61, Ar = 3.5) and low but significant genetic differentiation among populations (FST = 0.128, FST- ENA = 0.129, DJOST = 0.238). The AMOVA indicates that most of the variation occurs within individuals (79%) and from the variance among individuals (21%); almost, the same variation can be found between basins and between populations within basins. Differentiation and structure results were not associated with the basins, retrieving up to four genetic clusters and certain admixture in the central populations. Pairwise differentiation comparisons among populations showed inconsistencies considering their distribution throughout the basins. Genetic and geographic distances were significantly correlated at global and within the basins considered (p < .02), but low correlation indices were obtained (r < .37). These results are discussed in relation to the fragmented landscape, considering both natural and non- natural (humans) dispersal agents that may be moving Prosopis in the Atacama Desert.Fil: Bessega, Cecilia. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Ecología, Génetica y Evolución. Instituto de Ecología, Genética y Evolución; ArgentinaFil: Pometti, Carolina. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Ecología, Génetica y Evolución. Instituto de Ecología, Genética y Evolución; ArgentinaFil: Fortunato, Renee Hersilia. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Recursos Biológicos; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad de Morón. Facultad de Agronomía y Ciencias Agroalimentarias; ArgentinaFil: Greene, Francisca. San Pedro de Atacama, ChileFil: Santoro, Calogero M. Universidad de Tarapacá. Instituto de Alta Investigación; ChileFil: McRostie, Virginia. Pontificia Universidad Católica de Chile. Facultad de Ciencias Sociales. Escuela de Antropología. Centro del Desierto de Atacama; ChileWiley2021-04-09T11:52:01Z2021-04-09T11:52:01Z2021-03-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://hdl.handle.net/20.500.12123/9052https://onlinelibrary.wiley.com/doi/10.1002/ece3.72122045-7758https://doi.org/10.1002/ece3.7212Ecology & Evolution 11 (5) : 2375-2390 (March 2021)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)2025-09-29T13:45:10Zoai:localhost:20.500.12123/9052instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-09-29 13:45:11.078INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co- occurring in oases of the Atacama Desert (northern Chile)
title Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co- occurring in oases of the Atacama Desert (northern Chile)
spellingShingle Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co- occurring in oases of the Atacama Desert (northern Chile)
Bessega, Cecilia
Ceratonia siliqua
Diversidad Genética
Microsatélites
Estructura
Genetic Diversity
Structure
Microsatellites
Chile
Prosopis
Factores Sociocultural
Sociocultural Factors
Desierto de Atacama, Chile
title_short Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co- occurring in oases of the Atacama Desert (northern Chile)
title_full Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co- occurring in oases of the Atacama Desert (northern Chile)
title_fullStr Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co- occurring in oases of the Atacama Desert (northern Chile)
title_full_unstemmed Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co- occurring in oases of the Atacama Desert (northern Chile)
title_sort Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co- occurring in oases of the Atacama Desert (northern Chile)
dc.creator.none.fl_str_mv Bessega, Cecilia
Pometti, Carolina
Fortunato, Renee Hersilia
Greene, Francisca
Santoro, Calogero M.
McRostie, Virginia
author Bessega, Cecilia
author_facet Bessega, Cecilia
Pometti, Carolina
Fortunato, Renee Hersilia
Greene, Francisca
Santoro, Calogero M.
McRostie, Virginia
author_role author
author2 Pometti, Carolina
Fortunato, Renee Hersilia
Greene, Francisca
Santoro, Calogero M.
McRostie, Virginia
author2_role author
author
author
author
author
dc.subject.none.fl_str_mv Ceratonia siliqua
Diversidad Genética
Microsatélites
Estructura
Genetic Diversity
Structure
Microsatellites
Chile
Prosopis
Factores Sociocultural
Sociocultural Factors
Desierto de Atacama, Chile
topic Ceratonia siliqua
Diversidad Genética
Microsatélites
Estructura
Genetic Diversity
Structure
Microsatellites
Chile
Prosopis
Factores Sociocultural
Sociocultural Factors
Desierto de Atacama, Chile
dc.description.none.fl_txt_mv In the Atacama Desert from northern Chile (19– 24°S), Prosopis (Leguminosae) individuals are restricted to oases that are unevenly distributed and isolated from each other by large stretches of barren landscape constituting an interesting study model as the degree of connectivity between natural populations depends on their dispersal capacity and the barriers imposed by the landscape. Our goal was to assess the genetic diversity and the degree of differentiation among groups of Prosopis individuals of different species from Section Algarobia and putative hybrids (hereafter populations) co- occurring in these isolated oases from the Atacama Desert and determine whether genetic patterns are associated with dispersal barriers. Thirteen populations were sampled from oases located on three hydrographic basins (Pampa del Tamarugal, Rio Loa, and Salar de Atacama; northern, central, and southern basins, respectively). Individuals genotyped by eight SSRs show high levels of genetic diversity (HO = 0.61, Ar = 3.5) and low but significant genetic differentiation among populations (FST = 0.128, FST- ENA = 0.129, DJOST = 0.238). The AMOVA indicates that most of the variation occurs within individuals (79%) and from the variance among individuals (21%); almost, the same variation can be found between basins and between populations within basins. Differentiation and structure results were not associated with the basins, retrieving up to four genetic clusters and certain admixture in the central populations. Pairwise differentiation comparisons among populations showed inconsistencies considering their distribution throughout the basins. Genetic and geographic distances were significantly correlated at global and within the basins considered (p < .02), but low correlation indices were obtained (r < .37). These results are discussed in relation to the fragmented landscape, considering both natural and non- natural (humans) dispersal agents that may be moving Prosopis in the Atacama Desert.
Fil: Bessega, Cecilia. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Ecología, Génetica y Evolución. Instituto de Ecología, Genética y Evolución; Argentina
Fil: Pometti, Carolina. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Ecología, Génetica y Evolución. Instituto de Ecología, Genética y Evolución; Argentina
Fil: Fortunato, Renee Hersilia. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Recursos Biológicos; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad de Morón. Facultad de Agronomía y Ciencias Agroalimentarias; Argentina
Fil: Greene, Francisca. San Pedro de Atacama, Chile
Fil: Santoro, Calogero M. Universidad de Tarapacá. Instituto de Alta Investigación; Chile
Fil: McRostie, Virginia. Pontificia Universidad Católica de Chile. Facultad de Ciencias Sociales. Escuela de Antropología. Centro del Desierto de Atacama; Chile
description In the Atacama Desert from northern Chile (19– 24°S), Prosopis (Leguminosae) individuals are restricted to oases that are unevenly distributed and isolated from each other by large stretches of barren landscape constituting an interesting study model as the degree of connectivity between natural populations depends on their dispersal capacity and the barriers imposed by the landscape. Our goal was to assess the genetic diversity and the degree of differentiation among groups of Prosopis individuals of different species from Section Algarobia and putative hybrids (hereafter populations) co- occurring in these isolated oases from the Atacama Desert and determine whether genetic patterns are associated with dispersal barriers. Thirteen populations were sampled from oases located on three hydrographic basins (Pampa del Tamarugal, Rio Loa, and Salar de Atacama; northern, central, and southern basins, respectively). Individuals genotyped by eight SSRs show high levels of genetic diversity (HO = 0.61, Ar = 3.5) and low but significant genetic differentiation among populations (FST = 0.128, FST- ENA = 0.129, DJOST = 0.238). The AMOVA indicates that most of the variation occurs within individuals (79%) and from the variance among individuals (21%); almost, the same variation can be found between basins and between populations within basins. Differentiation and structure results were not associated with the basins, retrieving up to four genetic clusters and certain admixture in the central populations. Pairwise differentiation comparisons among populations showed inconsistencies considering their distribution throughout the basins. Genetic and geographic distances were significantly correlated at global and within the basins considered (p < .02), but low correlation indices were obtained (r < .37). These results are discussed in relation to the fragmented landscape, considering both natural and non- natural (humans) dispersal agents that may be moving Prosopis in the Atacama Desert.
publishDate 2021
dc.date.none.fl_str_mv 2021-04-09T11:52:01Z
2021-04-09T11:52:01Z
2021-03-01
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12123/9052
https://onlinelibrary.wiley.com/doi/10.1002/ece3.7212
2045-7758
https://doi.org/10.1002/ece3.7212
url http://hdl.handle.net/20.500.12123/9052
https://onlinelibrary.wiley.com/doi/10.1002/ece3.7212
https://doi.org/10.1002/ece3.7212
identifier_str_mv 2045-7758
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
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Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Wiley
publisher.none.fl_str_mv Wiley
dc.source.none.fl_str_mv Ecology & Evolution 11 (5) : 2375-2390 (March 2021)
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
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