Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile)

Autores
Bessega, Cecilia Fabiana; Pometti, Carolina Luciana; Fortunato, Renée Hersilia; Greene, Francisca; Santoro Delgado, Conrado Maria; McRostie, Virginia
Año de publicación
2021
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
In the Atacama Desert from northern Chile (19–24°S), Prosopis (Leguminosae) individuals are restricted to oases that are unevenly distributed and isolated from each other by large stretches of barren landscape constituting an interesting study model as the degree of connectivity between natural populations depends on their dispersal capacity and the barriers imposed by the landscape. Our goal was to assess the genetic diversity and the degree of differentiation among groups of Prosopis individuals of different species from Section Algarobia and putative hybrids (hereafter populations) co-occurring in these isolated oases from the Atacama Desert and determine whether genetic patterns are associated with dispersal barriers. Thirteen populations were sampled from oases located on three hydrographic basins (Pampa del Tamarugal, Rio Loa, and Salar de Atacama; northern, central, and southern basins, respectively). Individuals genotyped by eight SSRs show high levels of genetic diversity (HO = 0.61, Ar = 3.5) and low but significant genetic differentiation among populations (FST = 0.128, FST-ENA = 0.129, DJOST = 0.238). The AMOVA indicates that most of the variation occurs within individuals (79%) and from the variance among individuals (21%); almost, the same variation can be found between basins and between populations within basins. Differentiation and structure results were not associated with the basins, retrieving up to four genetic clusters and certain admixture in the central populations. Pairwise differentiation comparisons among populations showed inconsistencies considering their distribution throughout the basins. Genetic and geographic distances were significantly correlated at global and within the basins considered (p <.02), but low correlation indices were obtained (r <.37). These results are discussed in relation to the fragmented landscape, considering both natural and non-natural (humans) dispersal agents that may be moving Prosopis in the Atacama Desert.
Fil: Bessega, Cecilia Fabiana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Ecología, Genética y Evolución; Argentina
Fil: Pometti, Carolina Luciana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Ecología, Genética y Evolución; Argentina
Fil: Fortunato, Renée Hersilia. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación de Recursos Naturales. Instituto de Recursos Biológicos; Argentina. Universidad de Morón; Argentina
Fil: Greene, Francisca. San Pedro de Atacama; Chile
Fil: Santoro Delgado, Conrado Maria. Universidad de Tarapaca. Instituto de Alta Investigación; Chile
Fil: McRostie, Virginia. Fundación Desierto de Atacama; Chile. Universidad Católica de Chile; Chile. Pontificia Universidad Católica de Chile; Chile
Materia
ALGARROBO
CHILENSES
GENETIC DIVERSITY
MICROSATELLITES
SOCIOCULTURAL FACTORS
STRUCTURE
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/164818

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network_name_str CONICET Digital (CONICET)
spelling Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile)Bessega, Cecilia FabianaPometti, Carolina LucianaFortunato, Renée HersiliaGreene, FranciscaSantoro Delgado, Conrado MariaMcRostie, VirginiaALGARROBOCHILENSESGENETIC DIVERSITYMICROSATELLITESSOCIOCULTURAL FACTORSSTRUCTUREhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1In the Atacama Desert from northern Chile (19–24°S), Prosopis (Leguminosae) individuals are restricted to oases that are unevenly distributed and isolated from each other by large stretches of barren landscape constituting an interesting study model as the degree of connectivity between natural populations depends on their dispersal capacity and the barriers imposed by the landscape. Our goal was to assess the genetic diversity and the degree of differentiation among groups of Prosopis individuals of different species from Section Algarobia and putative hybrids (hereafter populations) co-occurring in these isolated oases from the Atacama Desert and determine whether genetic patterns are associated with dispersal barriers. Thirteen populations were sampled from oases located on three hydrographic basins (Pampa del Tamarugal, Rio Loa, and Salar de Atacama; northern, central, and southern basins, respectively). Individuals genotyped by eight SSRs show high levels of genetic diversity (HO = 0.61, Ar = 3.5) and low but significant genetic differentiation among populations (FST = 0.128, FST-ENA = 0.129, DJOST = 0.238). The AMOVA indicates that most of the variation occurs within individuals (79%) and from the variance among individuals (21%); almost, the same variation can be found between basins and between populations within basins. Differentiation and structure results were not associated with the basins, retrieving up to four genetic clusters and certain admixture in the central populations. Pairwise differentiation comparisons among populations showed inconsistencies considering their distribution throughout the basins. Genetic and geographic distances were significantly correlated at global and within the basins considered (p <.02), but low correlation indices were obtained (r <.37). These results are discussed in relation to the fragmented landscape, considering both natural and non-natural (humans) dispersal agents that may be moving Prosopis in the Atacama Desert.Fil: Bessega, Cecilia Fabiana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Ecología, Genética y Evolución; ArgentinaFil: Pometti, Carolina Luciana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Ecología, Genética y Evolución; ArgentinaFil: Fortunato, Renée Hersilia. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación de Recursos Naturales. Instituto de Recursos Biológicos; Argentina. Universidad de Morón; ArgentinaFil: Greene, Francisca. San Pedro de Atacama; ChileFil: Santoro Delgado, Conrado Maria. Universidad de Tarapaca. Instituto de Alta Investigación; ChileFil: McRostie, Virginia. Fundación Desierto de Atacama; Chile. Universidad Católica de Chile; Chile. Pontificia Universidad Católica de Chile; ChileJohn Wiley & Sons Ltd2021-03info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/164818Bessega, Cecilia Fabiana; Pometti, Carolina Luciana; Fortunato, Renée Hersilia; Greene, Francisca; Santoro Delgado, Conrado Maria; et al.; Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile); John Wiley & Sons Ltd; Ecology and Evolution; 11; 5; 3-2021; 2375-23902045-7758CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1002/ece3.7212info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/10.1002/ece3.7212info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T09:48:26Zoai:ri.conicet.gov.ar:11336/164818instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 09:48:27.162CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile)
title Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile)
spellingShingle Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile)
Bessega, Cecilia Fabiana
ALGARROBO
CHILENSES
GENETIC DIVERSITY
MICROSATELLITES
SOCIOCULTURAL FACTORS
STRUCTURE
title_short Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile)
title_full Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile)
title_fullStr Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile)
title_full_unstemmed Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile)
title_sort Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile)
dc.creator.none.fl_str_mv Bessega, Cecilia Fabiana
Pometti, Carolina Luciana
Fortunato, Renée Hersilia
Greene, Francisca
Santoro Delgado, Conrado Maria
McRostie, Virginia
author Bessega, Cecilia Fabiana
author_facet Bessega, Cecilia Fabiana
Pometti, Carolina Luciana
Fortunato, Renée Hersilia
Greene, Francisca
Santoro Delgado, Conrado Maria
McRostie, Virginia
author_role author
author2 Pometti, Carolina Luciana
Fortunato, Renée Hersilia
Greene, Francisca
Santoro Delgado, Conrado Maria
McRostie, Virginia
author2_role author
author
author
author
author
dc.subject.none.fl_str_mv ALGARROBO
CHILENSES
GENETIC DIVERSITY
MICROSATELLITES
SOCIOCULTURAL FACTORS
STRUCTURE
topic ALGARROBO
CHILENSES
GENETIC DIVERSITY
MICROSATELLITES
SOCIOCULTURAL FACTORS
STRUCTURE
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv In the Atacama Desert from northern Chile (19–24°S), Prosopis (Leguminosae) individuals are restricted to oases that are unevenly distributed and isolated from each other by large stretches of barren landscape constituting an interesting study model as the degree of connectivity between natural populations depends on their dispersal capacity and the barriers imposed by the landscape. Our goal was to assess the genetic diversity and the degree of differentiation among groups of Prosopis individuals of different species from Section Algarobia and putative hybrids (hereafter populations) co-occurring in these isolated oases from the Atacama Desert and determine whether genetic patterns are associated with dispersal barriers. Thirteen populations were sampled from oases located on three hydrographic basins (Pampa del Tamarugal, Rio Loa, and Salar de Atacama; northern, central, and southern basins, respectively). Individuals genotyped by eight SSRs show high levels of genetic diversity (HO = 0.61, Ar = 3.5) and low but significant genetic differentiation among populations (FST = 0.128, FST-ENA = 0.129, DJOST = 0.238). The AMOVA indicates that most of the variation occurs within individuals (79%) and from the variance among individuals (21%); almost, the same variation can be found between basins and between populations within basins. Differentiation and structure results were not associated with the basins, retrieving up to four genetic clusters and certain admixture in the central populations. Pairwise differentiation comparisons among populations showed inconsistencies considering their distribution throughout the basins. Genetic and geographic distances were significantly correlated at global and within the basins considered (p <.02), but low correlation indices were obtained (r <.37). These results are discussed in relation to the fragmented landscape, considering both natural and non-natural (humans) dispersal agents that may be moving Prosopis in the Atacama Desert.
Fil: Bessega, Cecilia Fabiana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Ecología, Genética y Evolución; Argentina
Fil: Pometti, Carolina Luciana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Ecología, Genética y Evolución; Argentina
Fil: Fortunato, Renée Hersilia. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación de Recursos Naturales. Instituto de Recursos Biológicos; Argentina. Universidad de Morón; Argentina
Fil: Greene, Francisca. San Pedro de Atacama; Chile
Fil: Santoro Delgado, Conrado Maria. Universidad de Tarapaca. Instituto de Alta Investigación; Chile
Fil: McRostie, Virginia. Fundación Desierto de Atacama; Chile. Universidad Católica de Chile; Chile. Pontificia Universidad Católica de Chile; Chile
description In the Atacama Desert from northern Chile (19–24°S), Prosopis (Leguminosae) individuals are restricted to oases that are unevenly distributed and isolated from each other by large stretches of barren landscape constituting an interesting study model as the degree of connectivity between natural populations depends on their dispersal capacity and the barriers imposed by the landscape. Our goal was to assess the genetic diversity and the degree of differentiation among groups of Prosopis individuals of different species from Section Algarobia and putative hybrids (hereafter populations) co-occurring in these isolated oases from the Atacama Desert and determine whether genetic patterns are associated with dispersal barriers. Thirteen populations were sampled from oases located on three hydrographic basins (Pampa del Tamarugal, Rio Loa, and Salar de Atacama; northern, central, and southern basins, respectively). Individuals genotyped by eight SSRs show high levels of genetic diversity (HO = 0.61, Ar = 3.5) and low but significant genetic differentiation among populations (FST = 0.128, FST-ENA = 0.129, DJOST = 0.238). The AMOVA indicates that most of the variation occurs within individuals (79%) and from the variance among individuals (21%); almost, the same variation can be found between basins and between populations within basins. Differentiation and structure results were not associated with the basins, retrieving up to four genetic clusters and certain admixture in the central populations. Pairwise differentiation comparisons among populations showed inconsistencies considering their distribution throughout the basins. Genetic and geographic distances were significantly correlated at global and within the basins considered (p <.02), but low correlation indices were obtained (r <.37). These results are discussed in relation to the fragmented landscape, considering both natural and non-natural (humans) dispersal agents that may be moving Prosopis in the Atacama Desert.
publishDate 2021
dc.date.none.fl_str_mv 2021-03
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/164818
Bessega, Cecilia Fabiana; Pometti, Carolina Luciana; Fortunato, Renée Hersilia; Greene, Francisca; Santoro Delgado, Conrado Maria; et al.; Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile); John Wiley & Sons Ltd; Ecology and Evolution; 11; 5; 3-2021; 2375-2390
2045-7758
CONICET Digital
CONICET
url http://hdl.handle.net/11336/164818
identifier_str_mv Bessega, Cecilia Fabiana; Pometti, Carolina Luciana; Fortunato, Renée Hersilia; Greene, Francisca; Santoro Delgado, Conrado Maria; et al.; Genetic studies of various Prosopis species (Leguminosae, Section Algarobia) co-occurring in oases of the Atacama Desert (northern Chile); John Wiley & Sons Ltd; Ecology and Evolution; 11; 5; 3-2021; 2375-2390
2045-7758
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1002/ece3.7212
info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/10.1002/ece3.7212
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv John Wiley & Sons Ltd
publisher.none.fl_str_mv John Wiley & Sons Ltd
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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