Studies on the essential YNL152w open reading frame in Saccharomyces cerevisiae

Autores
Ciklic, Ivan Francisco
Año de publicación
2007
Idioma
inglés
Tipo de recurso
tesis doctoral
Estado
versión publicada
Colaborador/a o director/a de tesis
Heinisch, Jürgen (director)
Descripción
Tesis para obtener el grado de Doctor en Biología/Química de la Universität Osnabrück, en 2007
The essential gene YNL152w was previously found in a screen designed to isolate putative negative regulators of the S. cerevisiae Pkc1p pathway. Activity assays were performed with a lexA-RLM1-lacZ integrated reporter in different ynl152w truncated mutants. In contrast to the original screen, there were no differences or the activities were even lower in some mutants. To analyze the consequences of different expression levels, YNL152w was expressed under the control of the GAL1/10 promoter. Growth curves were performed under high, intermediate and low expression levels. Strikingly, both conditional strains were able to grow under repressing conditions. However, an aberrant morphology was found suggesting that the cells are indeed affected by low amounts of Ynl152w protein. A series of successive Ynl152wp C-terminal truncations was analyzed to determine cell viability and to investigate the function of the protein. Remarkably, about 2/3 of the protein were dispensable to confer viability. Microscopic analyses of constructs revealed an aberrant morphology characteristic of a cytokinesis defective mutant, with the appearance of swollen cells and formation of big aggregates. Interestingly, the phenotype was more pronounced in the larger truncations. Coherent with these results time-lapse experiments with a large truncated mutant showed a stabilization of the SH3 protein Hof1p at the bud neck. This protein is involved in septum formation and has been reported as a binding partner of YNL152w. The phenotypes observed in the truncated mutants could be attributed to the presence of 4 proline rich motifs. Such motifs have been reported to interact with SH3 domains. An internal deletion of an aspartate rich domain present in the Ynl152wp sequence also displayed a phenotype very similar to that of the largest truncations. Therefore, this domain may play an important role in Ynl152wp function.
EEA Mendoza
Fil: Ciklic, Ivan Francisco. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; Argentina
Materia
Saccharomyces Cerevisiae
Genética
División Celular
Citoquininas
Fenotipos
Genetics
Cell Division
Cytokinins
Phenotypes
Gen YNL152w
Gene YNL152w
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
oai:localhost:20.500.12123/6081

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oai_identifier_str oai:localhost:20.500.12123/6081
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network_name_str INTA Digital (INTA)
spelling Studies on the essential YNL152w open reading frame in Saccharomyces cerevisiaeCiklic, Ivan FranciscoSaccharomyces CerevisiaeGenéticaDivisión CelularCitoquininasFenotiposGeneticsCell DivisionCytokininsPhenotypesGen YNL152wGene YNL152wTesis para obtener el grado de Doctor en Biología/Química de la Universität Osnabrück, en 2007The essential gene YNL152w was previously found in a screen designed to isolate putative negative regulators of the S. cerevisiae Pkc1p pathway. Activity assays were performed with a lexA-RLM1-lacZ integrated reporter in different ynl152w truncated mutants. In contrast to the original screen, there were no differences or the activities were even lower in some mutants. To analyze the consequences of different expression levels, YNL152w was expressed under the control of the GAL1/10 promoter. Growth curves were performed under high, intermediate and low expression levels. Strikingly, both conditional strains were able to grow under repressing conditions. However, an aberrant morphology was found suggesting that the cells are indeed affected by low amounts of Ynl152w protein. A series of successive Ynl152wp C-terminal truncations was analyzed to determine cell viability and to investigate the function of the protein. Remarkably, about 2/3 of the protein were dispensable to confer viability. Microscopic analyses of constructs revealed an aberrant morphology characteristic of a cytokinesis defective mutant, with the appearance of swollen cells and formation of big aggregates. Interestingly, the phenotype was more pronounced in the larger truncations. Coherent with these results time-lapse experiments with a large truncated mutant showed a stabilization of the SH3 protein Hof1p at the bud neck. This protein is involved in septum formation and has been reported as a binding partner of YNL152w. The phenotypes observed in the truncated mutants could be attributed to the presence of 4 proline rich motifs. Such motifs have been reported to interact with SH3 domains. An internal deletion of an aspartate rich domain present in the Ynl152wp sequence also displayed a phenotype very similar to that of the largest truncations. Therefore, this domain may play an important role in Ynl152wp function.EEA MendozaFil: Ciklic, Ivan Francisco. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; ArgentinaOsnabrück Universität, AlemaniaHeinisch, Jürgen (director)2019-10-10T12:29:37Z2019-10-10T12:29:37Z2007info:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_db06info:ar-repo/semantics/tesisDoctoralapplication/pdfhttp://hdl.handle.net/20.500.12123/6081https://repositorium.ub.uni-osnabrueck.de/handle/urn:nbn:de:gbv:700-2007062910enginfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuaria2025-09-29T13:44:47Zoai:localhost:20.500.12123/6081instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-09-29 13:44:47.789INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv Studies on the essential YNL152w open reading frame in Saccharomyces cerevisiae
title Studies on the essential YNL152w open reading frame in Saccharomyces cerevisiae
spellingShingle Studies on the essential YNL152w open reading frame in Saccharomyces cerevisiae
Ciklic, Ivan Francisco
Saccharomyces Cerevisiae
Genética
División Celular
Citoquininas
Fenotipos
Genetics
Cell Division
Cytokinins
Phenotypes
Gen YNL152w
Gene YNL152w
title_short Studies on the essential YNL152w open reading frame in Saccharomyces cerevisiae
title_full Studies on the essential YNL152w open reading frame in Saccharomyces cerevisiae
title_fullStr Studies on the essential YNL152w open reading frame in Saccharomyces cerevisiae
title_full_unstemmed Studies on the essential YNL152w open reading frame in Saccharomyces cerevisiae
title_sort Studies on the essential YNL152w open reading frame in Saccharomyces cerevisiae
dc.creator.none.fl_str_mv Ciklic, Ivan Francisco
author Ciklic, Ivan Francisco
author_facet Ciklic, Ivan Francisco
author_role author
dc.contributor.none.fl_str_mv Heinisch, Jürgen (director)
dc.subject.none.fl_str_mv Saccharomyces Cerevisiae
Genética
División Celular
Citoquininas
Fenotipos
Genetics
Cell Division
Cytokinins
Phenotypes
Gen YNL152w
Gene YNL152w
topic Saccharomyces Cerevisiae
Genética
División Celular
Citoquininas
Fenotipos
Genetics
Cell Division
Cytokinins
Phenotypes
Gen YNL152w
Gene YNL152w
dc.description.none.fl_txt_mv Tesis para obtener el grado de Doctor en Biología/Química de la Universität Osnabrück, en 2007
The essential gene YNL152w was previously found in a screen designed to isolate putative negative regulators of the S. cerevisiae Pkc1p pathway. Activity assays were performed with a lexA-RLM1-lacZ integrated reporter in different ynl152w truncated mutants. In contrast to the original screen, there were no differences or the activities were even lower in some mutants. To analyze the consequences of different expression levels, YNL152w was expressed under the control of the GAL1/10 promoter. Growth curves were performed under high, intermediate and low expression levels. Strikingly, both conditional strains were able to grow under repressing conditions. However, an aberrant morphology was found suggesting that the cells are indeed affected by low amounts of Ynl152w protein. A series of successive Ynl152wp C-terminal truncations was analyzed to determine cell viability and to investigate the function of the protein. Remarkably, about 2/3 of the protein were dispensable to confer viability. Microscopic analyses of constructs revealed an aberrant morphology characteristic of a cytokinesis defective mutant, with the appearance of swollen cells and formation of big aggregates. Interestingly, the phenotype was more pronounced in the larger truncations. Coherent with these results time-lapse experiments with a large truncated mutant showed a stabilization of the SH3 protein Hof1p at the bud neck. This protein is involved in septum formation and has been reported as a binding partner of YNL152w. The phenotypes observed in the truncated mutants could be attributed to the presence of 4 proline rich motifs. Such motifs have been reported to interact with SH3 domains. An internal deletion of an aspartate rich domain present in the Ynl152wp sequence also displayed a phenotype very similar to that of the largest truncations. Therefore, this domain may play an important role in Ynl152wp function.
EEA Mendoza
Fil: Ciklic, Ivan Francisco. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Mendoza; Argentina
description Tesis para obtener el grado de Doctor en Biología/Química de la Universität Osnabrück, en 2007
publishDate 2007
dc.date.none.fl_str_mv 2007
2019-10-10T12:29:37Z
2019-10-10T12:29:37Z
dc.type.none.fl_str_mv info:eu-repo/semantics/doctoralThesis
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_db06
info:ar-repo/semantics/tesisDoctoral
format doctoralThesis
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12123/6081
https://repositorium.ub.uni-osnabrueck.de/handle/urn:nbn:de:gbv:700-2007062910
url http://hdl.handle.net/20.500.12123/6081
https://repositorium.ub.uni-osnabrueck.de/handle/urn:nbn:de:gbv:700-2007062910
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Osnabrück Universität, Alemania
publisher.none.fl_str_mv Osnabrück Universität, Alemania
dc.source.none.fl_str_mv reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
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