Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductases

Autores
Yang, Guang; Wijma, Hein J.; Rozeboom, Henriëtte J.; Mascotti, María Laura; Fraaije, Marco Wilhelmus
Año de publicación
2023
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
The thioredoxin pathway is an antioxidant system present in most organisms. Electrons flow from a thioredoxin reductase to thioredoxin at the expense of a specific electron donor. Most known thioredoxin reductases rely on NADPH as a reducing cofactor. Yet, in 2016, a new type of thioredoxin reductase was discovered in Archaea which utilize instead a reduced deazaflavin cofactor (F420H2). For this reason, the respective enzyme was named deazaflavin-dependent flavin-containing thioredoxin reductase (DFTR). To have a broader understanding of the biochemistry of DFTRs, we identified and characterized two other archaeal representatives. A detailed kinetic study, which included pre-steady state kinetic analyses, revealed that these two DFTRs are highly specific for F420H2 while displaying marginal activity with NADPH. Nevertheless, they share mechanistic features with the canonical thioredoxin reductases that are dependent on NADPH (NTRs). A detailed structural analysis led to the identification of two key residues that tune cofactor specificity of DFTRs. This allowed us to propose a DFTR-specific sequence motif that enabled for the first time the identification and experimental characterization of a bacterial DFTR.
Fil: Yang, Guang. University of Groningen; Países Bajos
Fil: Wijma, Hein J.. University of Groningen; Países Bajos
Fil: Rozeboom, Henriëtte J.. University of Groningen; Países Bajos
Fil: Mascotti, María Laura. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - San Luis. Instituto Multidisciplinario de Investigaciones Biológicas de San Luis. Universidad Nacional de San Luis. Facultad de Ciencias Físico Matemáticas y Naturales. Instituto Multidisciplinario de Investigaciones Biológicas de San Luis; Argentina. University of Groningen; Países Bajos
Fil: Fraaije, Marco Wilhelmus. University of Groningen; Países Bajos
Materia
COFACTOR SPECIFICITY
DEAZAFLAVIN
F420
FLAVOPROTEIN
THIOREDOXIN REDUCTASE
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/227399

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network_name_str CONICET Digital (CONICET)
spelling Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductasesYang, GuangWijma, Hein J.Rozeboom, Henriëtte J.Mascotti, María LauraFraaije, Marco WilhelmusCOFACTOR SPECIFICITYDEAZAFLAVINF420FLAVOPROTEINTHIOREDOXIN REDUCTASEhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1The thioredoxin pathway is an antioxidant system present in most organisms. Electrons flow from a thioredoxin reductase to thioredoxin at the expense of a specific electron donor. Most known thioredoxin reductases rely on NADPH as a reducing cofactor. Yet, in 2016, a new type of thioredoxin reductase was discovered in Archaea which utilize instead a reduced deazaflavin cofactor (F420H2). For this reason, the respective enzyme was named deazaflavin-dependent flavin-containing thioredoxin reductase (DFTR). To have a broader understanding of the biochemistry of DFTRs, we identified and characterized two other archaeal representatives. A detailed kinetic study, which included pre-steady state kinetic analyses, revealed that these two DFTRs are highly specific for F420H2 while displaying marginal activity with NADPH. Nevertheless, they share mechanistic features with the canonical thioredoxin reductases that are dependent on NADPH (NTRs). A detailed structural analysis led to the identification of two key residues that tune cofactor specificity of DFTRs. This allowed us to propose a DFTR-specific sequence motif that enabled for the first time the identification and experimental characterization of a bacterial DFTR.Fil: Yang, Guang. University of Groningen; Países BajosFil: Wijma, Hein J.. University of Groningen; Países BajosFil: Rozeboom, Henriëtte J.. University of Groningen; Países BajosFil: Mascotti, María Laura. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - San Luis. Instituto Multidisciplinario de Investigaciones Biológicas de San Luis. Universidad Nacional de San Luis. Facultad de Ciencias Físico Matemáticas y Naturales. Instituto Multidisciplinario de Investigaciones Biológicas de San Luis; Argentina. University of Groningen; Países BajosFil: Fraaije, Marco Wilhelmus. University of Groningen; Países BajosWiley Blackwell Publishing, Inc2023-07info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/227399Yang, Guang; Wijma, Hein J.; Rozeboom, Henriëtte J.; Mascotti, María Laura; Fraaije, Marco Wilhelmus; Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductases; Wiley Blackwell Publishing, Inc; Febs Journal; 290; 19; 7-2023; 4777-47911742-464XCONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://febs.onlinelibrary.wiley.com/doi/10.1111/febs.16896info:eu-repo/semantics/altIdentifier/doi/10.1111/febs.16896info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-15T15:00:13Zoai:ri.conicet.gov.ar:11336/227399instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-15 15:00:14.24CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductases
title Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductases
spellingShingle Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductases
Yang, Guang
COFACTOR SPECIFICITY
DEAZAFLAVIN
F420
FLAVOPROTEIN
THIOREDOXIN REDUCTASE
title_short Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductases
title_full Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductases
title_fullStr Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductases
title_full_unstemmed Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductases
title_sort Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductases
dc.creator.none.fl_str_mv Yang, Guang
Wijma, Hein J.
Rozeboom, Henriëtte J.
Mascotti, María Laura
Fraaije, Marco Wilhelmus
author Yang, Guang
author_facet Yang, Guang
Wijma, Hein J.
Rozeboom, Henriëtte J.
Mascotti, María Laura
Fraaije, Marco Wilhelmus
author_role author
author2 Wijma, Hein J.
Rozeboom, Henriëtte J.
Mascotti, María Laura
Fraaije, Marco Wilhelmus
author2_role author
author
author
author
dc.subject.none.fl_str_mv COFACTOR SPECIFICITY
DEAZAFLAVIN
F420
FLAVOPROTEIN
THIOREDOXIN REDUCTASE
topic COFACTOR SPECIFICITY
DEAZAFLAVIN
F420
FLAVOPROTEIN
THIOREDOXIN REDUCTASE
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv The thioredoxin pathway is an antioxidant system present in most organisms. Electrons flow from a thioredoxin reductase to thioredoxin at the expense of a specific electron donor. Most known thioredoxin reductases rely on NADPH as a reducing cofactor. Yet, in 2016, a new type of thioredoxin reductase was discovered in Archaea which utilize instead a reduced deazaflavin cofactor (F420H2). For this reason, the respective enzyme was named deazaflavin-dependent flavin-containing thioredoxin reductase (DFTR). To have a broader understanding of the biochemistry of DFTRs, we identified and characterized two other archaeal representatives. A detailed kinetic study, which included pre-steady state kinetic analyses, revealed that these two DFTRs are highly specific for F420H2 while displaying marginal activity with NADPH. Nevertheless, they share mechanistic features with the canonical thioredoxin reductases that are dependent on NADPH (NTRs). A detailed structural analysis led to the identification of two key residues that tune cofactor specificity of DFTRs. This allowed us to propose a DFTR-specific sequence motif that enabled for the first time the identification and experimental characterization of a bacterial DFTR.
Fil: Yang, Guang. University of Groningen; Países Bajos
Fil: Wijma, Hein J.. University of Groningen; Países Bajos
Fil: Rozeboom, Henriëtte J.. University of Groningen; Países Bajos
Fil: Mascotti, María Laura. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - San Luis. Instituto Multidisciplinario de Investigaciones Biológicas de San Luis. Universidad Nacional de San Luis. Facultad de Ciencias Físico Matemáticas y Naturales. Instituto Multidisciplinario de Investigaciones Biológicas de San Luis; Argentina. University of Groningen; Países Bajos
Fil: Fraaije, Marco Wilhelmus. University of Groningen; Países Bajos
description The thioredoxin pathway is an antioxidant system present in most organisms. Electrons flow from a thioredoxin reductase to thioredoxin at the expense of a specific electron donor. Most known thioredoxin reductases rely on NADPH as a reducing cofactor. Yet, in 2016, a new type of thioredoxin reductase was discovered in Archaea which utilize instead a reduced deazaflavin cofactor (F420H2). For this reason, the respective enzyme was named deazaflavin-dependent flavin-containing thioredoxin reductase (DFTR). To have a broader understanding of the biochemistry of DFTRs, we identified and characterized two other archaeal representatives. A detailed kinetic study, which included pre-steady state kinetic analyses, revealed that these two DFTRs are highly specific for F420H2 while displaying marginal activity with NADPH. Nevertheless, they share mechanistic features with the canonical thioredoxin reductases that are dependent on NADPH (NTRs). A detailed structural analysis led to the identification of two key residues that tune cofactor specificity of DFTRs. This allowed us to propose a DFTR-specific sequence motif that enabled for the first time the identification and experimental characterization of a bacterial DFTR.
publishDate 2023
dc.date.none.fl_str_mv 2023-07
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/227399
Yang, Guang; Wijma, Hein J.; Rozeboom, Henriëtte J.; Mascotti, María Laura; Fraaije, Marco Wilhelmus; Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductases; Wiley Blackwell Publishing, Inc; Febs Journal; 290; 19; 7-2023; 4777-4791
1742-464X
CONICET Digital
CONICET
url http://hdl.handle.net/11336/227399
identifier_str_mv Yang, Guang; Wijma, Hein J.; Rozeboom, Henriëtte J.; Mascotti, María Laura; Fraaije, Marco Wilhelmus; Identification and characterization of archaeal and bacterial F420-dependent thioredoxin reductases; Wiley Blackwell Publishing, Inc; Febs Journal; 290; 19; 7-2023; 4777-4791
1742-464X
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://febs.onlinelibrary.wiley.com/doi/10.1111/febs.16896
info:eu-repo/semantics/altIdentifier/doi/10.1111/febs.16896
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Wiley Blackwell Publishing, Inc
publisher.none.fl_str_mv Wiley Blackwell Publishing, Inc
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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