New fluorinated rhodamines for optical microscopy and nanoscopy

Autores
Mitronova, Gyuzel Yu; Belov, Vladimir N.; Bossi, Mariano Luis; Wurm, Christian A.; Meyer, Lars; Medda, Rebecca; Moneron, Gael; Bretschneider, Stefan; Eggeling, Christian; Jakobs, Stefan; Hell, Stefan W.
Año de publicación
2010
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
New photostable rhodamine dyes represented by the compounds 1a-r and 3-5 are proposed as efficient fluorescent markers with unique combination of structural features. Unlike rhodamines with monoalkylated nitrogen atoms, N′,N-bis(2,2,2-trifluoroethyl) derivatives 1e, 1i, 1j, 3-H and 5 were found to undergo sulfonation of the xanthene fragment at the positions 4′ and 5′. Two fluorine atoms were introduced into the positions 2′ and 7′ of the 3′,6′-diaminoxanthene fragment in compounds 1a-d, 1i-l and 1m-r. The new rhodamine dyes may be excited with λ= 488 or 514 nm light; most of them emit light at λ = 512-554 nm (compounds 1q and 1r at λ=576 and 589 nm in methanol, respectively) and have high fluorescence quantum yields in solution (up to 98%), relatively long excited-state lifetimes (>3ns) and are resistant against photobleaching, especially at high laser intensities, as is usually applied in confocal microscopy. Sulfonation of the xanthene fragment with 30% SO3 in H2SO4 is compatible with the secondary amide bond (rhodamine-CON(Me)CH2CH 2COOH) formed with MeNHCH2CH2COOCH3 to providing the sterically unhindered carboxylic group required for further (bio)conjugation reactions. After creating the amino reactive sites, the modified derivatives may be used as fluorescent markers and labels for (bio)molecules in optical microscopy and nanoscopy with very-high light intensities. Further, the new rhodamine dyes are able to pass the plasma membrane of living cells, introducing them as potential labels for recent live-cell-tag approaches. We exemplify the excellent performance of the fluorinated rhodamines in optical microscopy by fluorescence correlation spectroscopy (FCS) and stimulated emission depletion (STED) nanoscopy experiments. © 2010 Wiley-VCH Verlag GmbH & Co. KGaA.
Fil: Mitronova, Gyuzel Yu. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Belov, Vladimir N.. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Bossi, Mariano Luis. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Wurm, Christian A.. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Meyer, Lars. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Medda, Rebecca. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Moneron, Gael. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Bretschneider, Stefan. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Eggeling, Christian. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Jakobs, Stefan. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Hell, Stefan W.. Max Planck Institute for Biophysical Chemistry; Alemania
Materia
Dyes/Pigments
Fluorescence
Fluorine
Microscopy
Rhodamines
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/71891

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oai_identifier_str oai:ri.conicet.gov.ar:11336/71891
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repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling New fluorinated rhodamines for optical microscopy and nanoscopyMitronova, Gyuzel YuBelov, Vladimir N.Bossi, Mariano LuisWurm, Christian A.Meyer, LarsMedda, RebeccaMoneron, GaelBretschneider, StefanEggeling, ChristianJakobs, StefanHell, Stefan W.Dyes/PigmentsFluorescenceFluorineMicroscopyRhodamineshttps://purl.org/becyt/ford/1.4https://purl.org/becyt/ford/1New photostable rhodamine dyes represented by the compounds 1a-r and 3-5 are proposed as efficient fluorescent markers with unique combination of structural features. Unlike rhodamines with monoalkylated nitrogen atoms, N′,N-bis(2,2,2-trifluoroethyl) derivatives 1e, 1i, 1j, 3-H and 5 were found to undergo sulfonation of the xanthene fragment at the positions 4′ and 5′. Two fluorine atoms were introduced into the positions 2′ and 7′ of the 3′,6′-diaminoxanthene fragment in compounds 1a-d, 1i-l and 1m-r. The new rhodamine dyes may be excited with λ= 488 or 514 nm light; most of them emit light at λ = 512-554 nm (compounds 1q and 1r at λ=576 and 589 nm in methanol, respectively) and have high fluorescence quantum yields in solution (up to 98%), relatively long excited-state lifetimes (>3ns) and are resistant against photobleaching, especially at high laser intensities, as is usually applied in confocal microscopy. Sulfonation of the xanthene fragment with 30% SO3 in H2SO4 is compatible with the secondary amide bond (rhodamine-CON(Me)CH2CH 2COOH) formed with MeNHCH2CH2COOCH3 to providing the sterically unhindered carboxylic group required for further (bio)conjugation reactions. After creating the amino reactive sites, the modified derivatives may be used as fluorescent markers and labels for (bio)molecules in optical microscopy and nanoscopy with very-high light intensities. Further, the new rhodamine dyes are able to pass the plasma membrane of living cells, introducing them as potential labels for recent live-cell-tag approaches. We exemplify the excellent performance of the fluorinated rhodamines in optical microscopy by fluorescence correlation spectroscopy (FCS) and stimulated emission depletion (STED) nanoscopy experiments. © 2010 Wiley-VCH Verlag GmbH & Co. KGaA.Fil: Mitronova, Gyuzel Yu. Max Planck Institute for Biophysical Chemistry; AlemaniaFil: Belov, Vladimir N.. Max Planck Institute for Biophysical Chemistry; AlemaniaFil: Bossi, Mariano Luis. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Max Planck Institute for Biophysical Chemistry; AlemaniaFil: Wurm, Christian A.. Max Planck Institute for Biophysical Chemistry; AlemaniaFil: Meyer, Lars. Max Planck Institute for Biophysical Chemistry; AlemaniaFil: Medda, Rebecca. Max Planck Institute for Biophysical Chemistry; AlemaniaFil: Moneron, Gael. Max Planck Institute for Biophysical Chemistry; AlemaniaFil: Bretschneider, Stefan. Max Planck Institute for Biophysical Chemistry; AlemaniaFil: Eggeling, Christian. Max Planck Institute for Biophysical Chemistry; AlemaniaFil: Jakobs, Stefan. Max Planck Institute for Biophysical Chemistry; AlemaniaFil: Hell, Stefan W.. Max Planck Institute for Biophysical Chemistry; AlemaniaWiley VCH Verlag2010-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/71891Mitronova, Gyuzel Yu; Belov, Vladimir N.; Bossi, Mariano Luis; Wurm, Christian A.; Meyer, Lars; et al.; New fluorinated rhodamines for optical microscopy and nanoscopy; Wiley VCH Verlag; Chemistry- A European Journal; 16; 15; 4-2010; 4477-44880947-6539CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1002/chem.200903272info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/full/10.1002/chem.200903272info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T09:53:57Zoai:ri.conicet.gov.ar:11336/71891instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 09:53:59.113CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv New fluorinated rhodamines for optical microscopy and nanoscopy
title New fluorinated rhodamines for optical microscopy and nanoscopy
spellingShingle New fluorinated rhodamines for optical microscopy and nanoscopy
Mitronova, Gyuzel Yu
Dyes/Pigments
Fluorescence
Fluorine
Microscopy
Rhodamines
title_short New fluorinated rhodamines for optical microscopy and nanoscopy
title_full New fluorinated rhodamines for optical microscopy and nanoscopy
title_fullStr New fluorinated rhodamines for optical microscopy and nanoscopy
title_full_unstemmed New fluorinated rhodamines for optical microscopy and nanoscopy
title_sort New fluorinated rhodamines for optical microscopy and nanoscopy
dc.creator.none.fl_str_mv Mitronova, Gyuzel Yu
Belov, Vladimir N.
Bossi, Mariano Luis
Wurm, Christian A.
Meyer, Lars
Medda, Rebecca
Moneron, Gael
Bretschneider, Stefan
Eggeling, Christian
Jakobs, Stefan
Hell, Stefan W.
author Mitronova, Gyuzel Yu
author_facet Mitronova, Gyuzel Yu
Belov, Vladimir N.
Bossi, Mariano Luis
Wurm, Christian A.
Meyer, Lars
Medda, Rebecca
Moneron, Gael
Bretschneider, Stefan
Eggeling, Christian
Jakobs, Stefan
Hell, Stefan W.
author_role author
author2 Belov, Vladimir N.
Bossi, Mariano Luis
Wurm, Christian A.
Meyer, Lars
Medda, Rebecca
Moneron, Gael
Bretschneider, Stefan
Eggeling, Christian
Jakobs, Stefan
Hell, Stefan W.
author2_role author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Dyes/Pigments
Fluorescence
Fluorine
Microscopy
Rhodamines
topic Dyes/Pigments
Fluorescence
Fluorine
Microscopy
Rhodamines
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.4
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv New photostable rhodamine dyes represented by the compounds 1a-r and 3-5 are proposed as efficient fluorescent markers with unique combination of structural features. Unlike rhodamines with monoalkylated nitrogen atoms, N′,N-bis(2,2,2-trifluoroethyl) derivatives 1e, 1i, 1j, 3-H and 5 were found to undergo sulfonation of the xanthene fragment at the positions 4′ and 5′. Two fluorine atoms were introduced into the positions 2′ and 7′ of the 3′,6′-diaminoxanthene fragment in compounds 1a-d, 1i-l and 1m-r. The new rhodamine dyes may be excited with λ= 488 or 514 nm light; most of them emit light at λ = 512-554 nm (compounds 1q and 1r at λ=576 and 589 nm in methanol, respectively) and have high fluorescence quantum yields in solution (up to 98%), relatively long excited-state lifetimes (>3ns) and are resistant against photobleaching, especially at high laser intensities, as is usually applied in confocal microscopy. Sulfonation of the xanthene fragment with 30% SO3 in H2SO4 is compatible with the secondary amide bond (rhodamine-CON(Me)CH2CH 2COOH) formed with MeNHCH2CH2COOCH3 to providing the sterically unhindered carboxylic group required for further (bio)conjugation reactions. After creating the amino reactive sites, the modified derivatives may be used as fluorescent markers and labels for (bio)molecules in optical microscopy and nanoscopy with very-high light intensities. Further, the new rhodamine dyes are able to pass the plasma membrane of living cells, introducing them as potential labels for recent live-cell-tag approaches. We exemplify the excellent performance of the fluorinated rhodamines in optical microscopy by fluorescence correlation spectroscopy (FCS) and stimulated emission depletion (STED) nanoscopy experiments. © 2010 Wiley-VCH Verlag GmbH & Co. KGaA.
Fil: Mitronova, Gyuzel Yu. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Belov, Vladimir N.. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Bossi, Mariano Luis. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Wurm, Christian A.. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Meyer, Lars. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Medda, Rebecca. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Moneron, Gael. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Bretschneider, Stefan. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Eggeling, Christian. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Jakobs, Stefan. Max Planck Institute for Biophysical Chemistry; Alemania
Fil: Hell, Stefan W.. Max Planck Institute for Biophysical Chemistry; Alemania
description New photostable rhodamine dyes represented by the compounds 1a-r and 3-5 are proposed as efficient fluorescent markers with unique combination of structural features. Unlike rhodamines with monoalkylated nitrogen atoms, N′,N-bis(2,2,2-trifluoroethyl) derivatives 1e, 1i, 1j, 3-H and 5 were found to undergo sulfonation of the xanthene fragment at the positions 4′ and 5′. Two fluorine atoms were introduced into the positions 2′ and 7′ of the 3′,6′-diaminoxanthene fragment in compounds 1a-d, 1i-l and 1m-r. The new rhodamine dyes may be excited with λ= 488 or 514 nm light; most of them emit light at λ = 512-554 nm (compounds 1q and 1r at λ=576 and 589 nm in methanol, respectively) and have high fluorescence quantum yields in solution (up to 98%), relatively long excited-state lifetimes (>3ns) and are resistant against photobleaching, especially at high laser intensities, as is usually applied in confocal microscopy. Sulfonation of the xanthene fragment with 30% SO3 in H2SO4 is compatible with the secondary amide bond (rhodamine-CON(Me)CH2CH 2COOH) formed with MeNHCH2CH2COOCH3 to providing the sterically unhindered carboxylic group required for further (bio)conjugation reactions. After creating the amino reactive sites, the modified derivatives may be used as fluorescent markers and labels for (bio)molecules in optical microscopy and nanoscopy with very-high light intensities. Further, the new rhodamine dyes are able to pass the plasma membrane of living cells, introducing them as potential labels for recent live-cell-tag approaches. We exemplify the excellent performance of the fluorinated rhodamines in optical microscopy by fluorescence correlation spectroscopy (FCS) and stimulated emission depletion (STED) nanoscopy experiments. © 2010 Wiley-VCH Verlag GmbH & Co. KGaA.
publishDate 2010
dc.date.none.fl_str_mv 2010-04
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/71891
Mitronova, Gyuzel Yu; Belov, Vladimir N.; Bossi, Mariano Luis; Wurm, Christian A.; Meyer, Lars; et al.; New fluorinated rhodamines for optical microscopy and nanoscopy; Wiley VCH Verlag; Chemistry- A European Journal; 16; 15; 4-2010; 4477-4488
0947-6539
CONICET Digital
CONICET
url http://hdl.handle.net/11336/71891
identifier_str_mv Mitronova, Gyuzel Yu; Belov, Vladimir N.; Bossi, Mariano Luis; Wurm, Christian A.; Meyer, Lars; et al.; New fluorinated rhodamines for optical microscopy and nanoscopy; Wiley VCH Verlag; Chemistry- A European Journal; 16; 15; 4-2010; 4477-4488
0947-6539
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1002/chem.200903272
info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/full/10.1002/chem.200903272
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Wiley VCH Verlag
publisher.none.fl_str_mv Wiley VCH Verlag
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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