Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades

Autores: Bruneau, Anne; Doyle, Jeff J.; Herendeen, Patrick; Hughes, Colin; Kenicer, Greg; Lewis, Gwilym; Mackinder, Barbara; Pennington, R. Toby; Sanderson, Michael J.; Wojciechowski, Martin F.; Boatwright, Stephen; Brown, Gillian; Cardoso, Domingos; Crisp, Michael; Egan, Ashley; Fortunato, Renée Hersilia; Hawkins, Julie; Kajita, Tadashi; Klitgaard, Bente; Koenen, Erik; Lavin, Matt; Luckow, Melissa; Marazzi, Brigitte; McMahon, Michelle M.; Miller, Joseph T.; Murphy, Daniel J.; Ohashi, Hiroyoshi; Queiroz, Luciano P. de; Rico, Lourdes; Särkinen, Tiina; Schrire, Brian; Simon, Marcelo F.; Souza, Elvia R.; Steele, Kelly; Torke, Benjamin M.; Wieringa, Jan J.; van Wyk, Ben Erik; Legume Phylogeny Working Group
Año de publicación: 2013
Idioma: inglés
Tipo de recurso: artículo
Estado: versión publicada
Descripción: The Leguminosae, the third-largest angiosperm family, has a global distribution and high ecological and economic importance. We examine how the legume systematic research community might join forces to produce a comprehensive phylogenetic estimate for the ca. 751 genera and ca. 19,500 species of legumes and then translate it into a phylogeny-based classification. We review the current state of knowledge of legume phylogeny and highlight where problems lie, for example in taxon sampling and phylogenetic resolution. We review approaches from bioinformatics and next-generation sequencing, which can facilitate the production of better phylogenetic estimates. Finally, we examine how morphology can be incorporated into legume phylogeny to address issues in comparative biology and classification. Our goal is to stimulate the research needed to improve our knowledge of legume phylogeny and evolution; the approaches that we discuss may also be relevant to other species-rich angiosperm clades.
Fil: Bruneau, Anne. University of Montreal; Canadá
Fil: Doyle, Jeff J.. Cornell University; Estados Unidos
Fil: Herendeen, Patrick. Chicago Botanic Garden; Estados Unidos
Fil: Hughes, Colin. Universitat Zurich; Suiza
Fil: Kenicer, Greg. Royal Botanic Garden Edinburgh; Reino Unido
Fil: Lewis, Gwilym. Royal Botanic Gardens; Reino Unido
Fil: Mackinder, Barbara. Royal Botanic Gardens; Reino Unido. Royal Botanic Garden Edinburgh; Reino Unido
Fil: Pennington, R. Toby. Royal Botanic Garden Edinburgh; Reino Unido
Fil: Sanderson, Michael J.. University of Arizona; Estados Unidos
Fil: Wojciechowski, Martin F.. Arizona State University; Estados Unidos
Fil: Boatwright, Stephen. University of the Western Cape; Sudáfrica
Fil: Brown, Gillian. The University of Melbourne; Australia
Fil: Cardoso, Domingos. Universidade Estadual de Feira de Santana; Brasil
Fil: Crisp, Michael. Australian National University; Australia
Fil: Egan, Ashley. East Carolina University; Estados Unidos
Fil: Fortunato, Renée Hersilia. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación de Recursos Naturales. Instituto de Recursos Biológicos; Argentina
Fil: Hawkins, Julie. University of Reading; Reino Unido
Fil: Kajita, Tadashi. Chiba University; Japón
Fil: Klitgaard, Bente. Royal Botanic Gardens; Reino Unido
Fil: Koenen, Erik. Universitat Zurich; Suiza
Fil: Lavin, Matt. State University of Montana; Estados Unidos
Fil: Luckow, Melissa. Cornell University; Estados Unidos
Fil: Marazzi, Brigitte. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: McMahon, Michelle M.. University of Arizona; Estados Unidos
Fil: Miller, Joseph T.. Australian National Herbarium. CSIRO Plant Industry. Centre for Australian National Biodiversity Research; Australia
Fil: Murphy, Daniel J.. Royal Botanic Gardens Melbourne; Australia
Fil: Ohashi, Hiroyoshi. Tohoku University; Japón
Fil: Queiroz, Luciano P. de. Universidade Estadual de Feira de Santana; Brasil
Fil: Rico, Lourdes. Royal Botanic Gardens; Reino Unido
Fil: Särkinen, Tiina. Natural History Museum; Reino Unido
Fil: Schrire, Brian. Royal Botanic Gardens; Reino Unido
Fil: Simon, Marcelo F.. Embrapa Recursos Genéticos e Biotecnologia; Brasil
Fil: Souza, Elvia R.. Universidade Estadual de Feira de Santana; Brasil
Fil: Steele, Kelly. Arizona State University; Estados Unidos
Fil: Torke, Benjamin M.. New York Botanical Garden; Estados Unidos
Fil: Wieringa, Jan J.. University of Agriculture Wageningen; Países Bajos. Wageningen University. Netherlands Centre for Biodiversity Naturalis; Países Bajos
Fil: van Wyk, Ben Erik. University of Johannesburgo; Sudáfrica
Fil: Legume Phylogeny Working Group. No especifica;
Materia: Mimosoideae
Low-Copy Nuclear Genes
Multiple Sequence Alignment
Phylogenetic Inference
Caesalpinioideae
Fabaceae
Leguminosae
Papilionoideae
Nivel de accesibilidad: acceso abierto
Condiciones de uso: https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
Institución: Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador: oai:ri.conicet.gov.ar:11336/27330

Acceder

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spelling	Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich cladesBruneau, AnneDoyle, Jeff J.Herendeen, PatrickHughes, ColinKenicer, GregLewis, GwilymMackinder, BarbaraPennington, R. TobySanderson, Michael J.Wojciechowski, Martin F.Boatwright, StephenBrown, GillianCardoso, DomingosCrisp, MichaelEgan, AshleyFortunato, Renée HersiliaHawkins, JulieKajita, TadashiKlitgaard, BenteKoenen, ErikLavin, MattLuckow, MelissaMarazzi, BrigitteMcMahon, Michelle M.Miller, Joseph T.Murphy, Daniel J.Ohashi, HiroyoshiQueiroz, Luciano P. deRico, LourdesSärkinen, TiinaSchrire, BrianSimon, Marcelo F.Souza, Elvia R.Steele, KellyTorke, Benjamin M.Wieringa, Jan J.van Wyk, Ben ErikLegume Phylogeny Working GroupMimosoideaeLow-Copy Nuclear GenesMultiple Sequence AlignmentPhylogenetic InferenceCaesalpinioideaeFabaceaeLeguminosaePapilionoideaehttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1The Leguminosae, the third-largest angiosperm family, has a global distribution and high ecological and economic importance. We examine how the legume systematic research community might join forces to produce a comprehensive phylogenetic estimate for the ca. 751 genera and ca. 19,500 species of legumes and then translate it into a phylogeny-based classification. We review the current state of knowledge of legume phylogeny and highlight where problems lie, for example in taxon sampling and phylogenetic resolution. We review approaches from bioinformatics and next-generation sequencing, which can facilitate the production of better phylogenetic estimates. Finally, we examine how morphology can be incorporated into legume phylogeny to address issues in comparative biology and classification. Our goal is to stimulate the research needed to improve our knowledge of legume phylogeny and evolution; the approaches that we discuss may also be relevant to other species-rich angiosperm clades.Fil: Bruneau, Anne. University of Montreal; CanadáFil: Doyle, Jeff J.. Cornell University; Estados UnidosFil: Herendeen, Patrick. Chicago Botanic Garden; Estados UnidosFil: Hughes, Colin. Universitat Zurich; SuizaFil: Kenicer, Greg. Royal Botanic Garden Edinburgh; Reino UnidoFil: Lewis, Gwilym. Royal Botanic Gardens; Reino UnidoFil: Mackinder, Barbara. Royal Botanic Gardens; Reino Unido. Royal Botanic Garden Edinburgh; Reino UnidoFil: Pennington, R. Toby. Royal Botanic Garden Edinburgh; Reino UnidoFil: Sanderson, Michael J.. University of Arizona; Estados UnidosFil: Wojciechowski, Martin F.. Arizona State University; Estados UnidosFil: Boatwright, Stephen. University of the Western Cape; SudáfricaFil: Brown, Gillian. The University of Melbourne; AustraliaFil: Cardoso, Domingos. Universidade Estadual de Feira de Santana; BrasilFil: Crisp, Michael. Australian National University; AustraliaFil: Egan, Ashley. East Carolina University; Estados UnidosFil: Fortunato, Renée Hersilia. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación de Recursos Naturales. Instituto de Recursos Biológicos; ArgentinaFil: Hawkins, Julie. University of Reading; Reino UnidoFil: Kajita, Tadashi. Chiba University; JapónFil: Klitgaard, Bente. Royal Botanic Gardens; Reino UnidoFil: Koenen, Erik. Universitat Zurich; SuizaFil: Lavin, Matt. State University of Montana; Estados UnidosFil: Luckow, Melissa. Cornell University; Estados UnidosFil: Marazzi, Brigitte. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: McMahon, Michelle M.. University of Arizona; Estados UnidosFil: Miller, Joseph T.. Australian National Herbarium. CSIRO Plant Industry. Centre for Australian National Biodiversity Research; AustraliaFil: Murphy, Daniel J.. Royal Botanic Gardens Melbourne; AustraliaFil: Ohashi, Hiroyoshi. Tohoku University; JapónFil: Queiroz, Luciano P. de. Universidade Estadual de Feira de Santana; BrasilFil: Rico, Lourdes. Royal Botanic Gardens; Reino UnidoFil: Särkinen, Tiina. Natural History Museum; Reino UnidoFil: Schrire, Brian. Royal Botanic Gardens; Reino UnidoFil: Simon, Marcelo F.. Embrapa Recursos Genéticos e Biotecnologia; BrasilFil: Souza, Elvia R.. Universidade Estadual de Feira de Santana; BrasilFil: Steele, Kelly. Arizona State University; Estados UnidosFil: Torke, Benjamin M.. New York Botanical Garden; Estados UnidosFil: Wieringa, Jan J.. University of Agriculture Wageningen; Países Bajos. Wageningen University. Netherlands Centre for Biodiversity Naturalis; Países BajosFil: van Wyk, Ben Erik. University of Johannesburgo; SudáfricaFil: Legume Phylogeny Working Group. No especifica;International Association for Plant Taxonomy2013-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/27330Bruneau, Anne; Doyle, Jeff J.; Herendeen, Patrick; Hughes, Colin; Kenicer, Greg; et al.; Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades; International Association for Plant Taxonomy; Taxon; 62; 2; 4-2013; 217-2480040-0262CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/http://www.ingentaconnect.com/content/iapt/tax/2013/00000062/00000002/art00002info:eu-repo/semantics/altIdentifier/doi/10.12705/622.8info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T09:59:49Zoai:ri.conicet.gov.ar:11336/27330instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 09:59:50.237CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv	Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades
title	Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades
spellingShingle	Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades Bruneau, Anne Mimosoideae Low-Copy Nuclear Genes Multiple Sequence Alignment Phylogenetic Inference Caesalpinioideae Fabaceae Leguminosae Papilionoideae
title_short	Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades
title_full	Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades
title_fullStr	Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades
title_full_unstemmed	Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades
title_sort	Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades
dc.creator.none.fl_str_mv	Bruneau, Anne Doyle, Jeff J. Herendeen, Patrick Hughes, Colin Kenicer, Greg Lewis, Gwilym Mackinder, Barbara Pennington, R. Toby Sanderson, Michael J. Wojciechowski, Martin F. Boatwright, Stephen Brown, Gillian Cardoso, Domingos Crisp, Michael Egan, Ashley Fortunato, Renée Hersilia Hawkins, Julie Kajita, Tadashi Klitgaard, Bente Koenen, Erik Lavin, Matt Luckow, Melissa Marazzi, Brigitte McMahon, Michelle M. Miller, Joseph T. Murphy, Daniel J. Ohashi, Hiroyoshi Queiroz, Luciano P. de Rico, Lourdes Särkinen, Tiina Schrire, Brian Simon, Marcelo F. Souza, Elvia R. Steele, Kelly Torke, Benjamin M. Wieringa, Jan J. van Wyk, Ben Erik Legume Phylogeny Working Group
author	Bruneau, Anne
author_facet	Bruneau, Anne Doyle, Jeff J. Herendeen, Patrick Hughes, Colin Kenicer, Greg Lewis, Gwilym Mackinder, Barbara Pennington, R. Toby Sanderson, Michael J. Wojciechowski, Martin F. Boatwright, Stephen Brown, Gillian Cardoso, Domingos Crisp, Michael Egan, Ashley Fortunato, Renée Hersilia Hawkins, Julie Kajita, Tadashi Klitgaard, Bente Koenen, Erik Lavin, Matt Luckow, Melissa Marazzi, Brigitte McMahon, Michelle M. Miller, Joseph T. Murphy, Daniel J. Ohashi, Hiroyoshi Queiroz, Luciano P. de Rico, Lourdes Särkinen, Tiina Schrire, Brian Simon, Marcelo F. Souza, Elvia R. Steele, Kelly Torke, Benjamin M. Wieringa, Jan J. van Wyk, Ben Erik Legume Phylogeny Working Group
author_role	author
author2	Doyle, Jeff J. Herendeen, Patrick Hughes, Colin Kenicer, Greg Lewis, Gwilym Mackinder, Barbara Pennington, R. Toby Sanderson, Michael J. Wojciechowski, Martin F. Boatwright, Stephen Brown, Gillian Cardoso, Domingos Crisp, Michael Egan, Ashley Fortunato, Renée Hersilia Hawkins, Julie Kajita, Tadashi Klitgaard, Bente Koenen, Erik Lavin, Matt Luckow, Melissa Marazzi, Brigitte McMahon, Michelle M. Miller, Joseph T. Murphy, Daniel J. Ohashi, Hiroyoshi Queiroz, Luciano P. de Rico, Lourdes Särkinen, Tiina Schrire, Brian Simon, Marcelo F. Souza, Elvia R. Steele, Kelly Torke, Benjamin M. Wieringa, Jan J. van Wyk, Ben Erik Legume Phylogeny Working Group
author2_role	author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author
dc.subject.none.fl_str_mv	Mimosoideae Low-Copy Nuclear Genes Multiple Sequence Alignment Phylogenetic Inference Caesalpinioideae Fabaceae Leguminosae Papilionoideae
topic	Mimosoideae Low-Copy Nuclear Genes Multiple Sequence Alignment Phylogenetic Inference Caesalpinioideae Fabaceae Leguminosae Papilionoideae
purl_subject.fl_str_mv	https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv	The Leguminosae, the third-largest angiosperm family, has a global distribution and high ecological and economic importance. We examine how the legume systematic research community might join forces to produce a comprehensive phylogenetic estimate for the ca. 751 genera and ca. 19,500 species of legumes and then translate it into a phylogeny-based classification. We review the current state of knowledge of legume phylogeny and highlight where problems lie, for example in taxon sampling and phylogenetic resolution. We review approaches from bioinformatics and next-generation sequencing, which can facilitate the production of better phylogenetic estimates. Finally, we examine how morphology can be incorporated into legume phylogeny to address issues in comparative biology and classification. Our goal is to stimulate the research needed to improve our knowledge of legume phylogeny and evolution; the approaches that we discuss may also be relevant to other species-rich angiosperm clades. Fil: Bruneau, Anne. University of Montreal; Canadá Fil: Doyle, Jeff J.. Cornell University; Estados Unidos Fil: Herendeen, Patrick. Chicago Botanic Garden; Estados Unidos Fil: Hughes, Colin. Universitat Zurich; Suiza Fil: Kenicer, Greg. Royal Botanic Garden Edinburgh; Reino Unido Fil: Lewis, Gwilym. Royal Botanic Gardens; Reino Unido Fil: Mackinder, Barbara. Royal Botanic Gardens; Reino Unido. Royal Botanic Garden Edinburgh; Reino Unido Fil: Pennington, R. Toby. Royal Botanic Garden Edinburgh; Reino Unido Fil: Sanderson, Michael J.. University of Arizona; Estados Unidos Fil: Wojciechowski, Martin F.. Arizona State University; Estados Unidos Fil: Boatwright, Stephen. University of the Western Cape; Sudáfrica Fil: Brown, Gillian. The University of Melbourne; Australia Fil: Cardoso, Domingos. Universidade Estadual de Feira de Santana; Brasil Fil: Crisp, Michael. Australian National University; Australia Fil: Egan, Ashley. East Carolina University; Estados Unidos Fil: Fortunato, Renée Hersilia. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación de Recursos Naturales. Instituto de Recursos Biológicos; Argentina Fil: Hawkins, Julie. University of Reading; Reino Unido Fil: Kajita, Tadashi. Chiba University; Japón Fil: Klitgaard, Bente. Royal Botanic Gardens; Reino Unido Fil: Koenen, Erik. Universitat Zurich; Suiza Fil: Lavin, Matt. State University of Montana; Estados Unidos Fil: Luckow, Melissa. Cornell University; Estados Unidos Fil: Marazzi, Brigitte. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: McMahon, Michelle M.. University of Arizona; Estados Unidos Fil: Miller, Joseph T.. Australian National Herbarium. CSIRO Plant Industry. Centre for Australian National Biodiversity Research; Australia Fil: Murphy, Daniel J.. Royal Botanic Gardens Melbourne; Australia Fil: Ohashi, Hiroyoshi. Tohoku University; Japón Fil: Queiroz, Luciano P. de. Universidade Estadual de Feira de Santana; Brasil Fil: Rico, Lourdes. Royal Botanic Gardens; Reino Unido Fil: Särkinen, Tiina. Natural History Museum; Reino Unido Fil: Schrire, Brian. Royal Botanic Gardens; Reino Unido Fil: Simon, Marcelo F.. Embrapa Recursos Genéticos e Biotecnologia; Brasil Fil: Souza, Elvia R.. Universidade Estadual de Feira de Santana; Brasil Fil: Steele, Kelly. Arizona State University; Estados Unidos Fil: Torke, Benjamin M.. New York Botanical Garden; Estados Unidos Fil: Wieringa, Jan J.. University of Agriculture Wageningen; Países Bajos. Wageningen University. Netherlands Centre for Biodiversity Naturalis; Países Bajos Fil: van Wyk, Ben Erik. University of Johannesburgo; Sudáfrica Fil: Legume Phylogeny Working Group. No especifica;
description	The Leguminosae, the third-largest angiosperm family, has a global distribution and high ecological and economic importance. We examine how the legume systematic research community might join forces to produce a comprehensive phylogenetic estimate for the ca. 751 genera and ca. 19,500 species of legumes and then translate it into a phylogeny-based classification. We review the current state of knowledge of legume phylogeny and highlight where problems lie, for example in taxon sampling and phylogenetic resolution. We review approaches from bioinformatics and next-generation sequencing, which can facilitate the production of better phylogenetic estimates. Finally, we examine how morphology can be incorporated into legume phylogeny to address issues in comparative biology and classification. Our goal is to stimulate the research needed to improve our knowledge of legume phylogeny and evolution; the approaches that we discuss may also be relevant to other species-rich angiosperm clades.
publishDate	2013
dc.date.none.fl_str_mv	2013-04
dc.type.none.fl_str_mv	info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo
format	article
status_str	publishedVersion
dc.identifier.none.fl_str_mv	http://hdl.handle.net/11336/27330 Bruneau, Anne; Doyle, Jeff J.; Herendeen, Patrick; Hughes, Colin; Kenicer, Greg; et al.; Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades; International Association for Plant Taxonomy; Taxon; 62; 2; 4-2013; 217-248 0040-0262 CONICET Digital CONICET
url	http://hdl.handle.net/11336/27330
identifier_str_mv	Bruneau, Anne; Doyle, Jeff J.; Herendeen, Patrick; Hughes, Colin; Kenicer, Greg; et al.; Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades; International Association for Plant Taxonomy; Taxon; 62; 2; 4-2013; 217-248 0040-0262 CONICET Digital CONICET
dc.language.none.fl_str_mv	eng
language	eng
dc.relation.none.fl_str_mv	info:eu-repo/semantics/altIdentifier/url/http://www.ingentaconnect.com/content/iapt/tax/2013/00000062/00000002/art00002 info:eu-repo/semantics/altIdentifier/doi/10.12705/622.8
dc.rights.none.fl_str_mv	info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv	openAccess
rights_invalid_str_mv	https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv	application/pdf application/pdf
dc.publisher.none.fl_str_mv	International Association for Plant Taxonomy
publisher.none.fl_str_mv	International Association for Plant Taxonomy
dc.source.none.fl_str_mv	reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str	CONICET Digital (CONICET)
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instname_str	Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv	CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv	dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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Legume phylogeny and classification in the 21st century: Progress, prospects and lessons for other species-rich clades

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