Quantification of viable protozoan parasites on leafy greens using molecular methods
- Autores
- Kim, Minji; Shapiro, Karen; Rajal, Verónica Beatriz; Packham, Andrea; Aguilar, Beatriz; Rueda, Lezlie; Wuertz, Stefan
- Año de publicación
- 2021
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Protozoan contamination in produce is of growing importance due to their capacity to cause illnesses in consumers of fresh leafy greens. Viability assays are essential to accurately estimate health risk caused by viable parasites that contaminate food. We evaluated the efficacy of reverse transcription quantitative PCR (RT-qPCR), propidium monoazide coupled with (q)PCR, and viability staining using propidium iodide through systematic laboratory spiking experiments for selective detection of viable Cryptosporidium parvum, Giardia enterica, and Toxoplasma gondii. In the presence of only viable protozoa, the RT-qPCR assays could accurately detect two to nine (oo)cysts/g spinach (in 10 g processed). When different proportions of viable and inactivated parasite were spiked, mRNA concentrations correlated with increasing proportions of viable (oo)cysts, although low levels of false-positive mRNA signals were detectable in the presence of high amounts of inactivated protozoa. Our study demonstrated that among the methods tested, RT-qPCR performed more effectively to discriminate viable from inactivated C. parvum, G. enterica and T. gondii on spinach. This application of viability methods on leafy greens can be adopted by the produce industry and regulatory agencies charged with protection of human public health to screen leafy greens for the presence of viable protozoan pathogen contamination.
Fil: Kim, Minji. University of California at Davis; Estados Unidos
Fil: Shapiro, Karen. University of California at Davis; Estados Unidos
Fil: Rajal, Verónica Beatriz. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Salta. Instituto de Investigaciones para la Industria Química. Universidad Nacional de Salta. Facultad de Ingeniería. Instituto de Investigaciones para la Industria Química; Argentina
Fil: Packham, Andrea. University of California at Davis; Estados Unidos
Fil: Aguilar, Beatriz. University of California at Davis; Estados Unidos
Fil: Rueda, Lezlie. University of California at Davis; Estados Unidos
Fil: Wuertz, Stefan. University of California at Davis; Estados Unidos - Materia
-
CRYPTOSPORIDIUM
GIARDIA
PROPIDIUM MONOAZIDE (PMA)
REVERSE TRANSCRIPTION QUANTITATIVE PCR (RT-QPCR)
TOXOPLASMA
VIABILITY - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
.jpg)
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/175484
Ver los metadatos del registro completo
| id |
CONICETDig_bd8b13801679ed8f3394181ac71786aa |
|---|---|
| oai_identifier_str |
oai:ri.conicet.gov.ar:11336/175484 |
| network_acronym_str |
CONICETDig |
| repository_id_str |
3498 |
| network_name_str |
CONICET Digital (CONICET) |
| spelling |
Quantification of viable protozoan parasites on leafy greens using molecular methodsKim, MinjiShapiro, KarenRajal, Verónica BeatrizPackham, AndreaAguilar, BeatrizRueda, LezlieWuertz, StefanCRYPTOSPORIDIUMGIARDIAPROPIDIUM MONOAZIDE (PMA)REVERSE TRANSCRIPTION QUANTITATIVE PCR (RT-QPCR)TOXOPLASMAVIABILITYhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Protozoan contamination in produce is of growing importance due to their capacity to cause illnesses in consumers of fresh leafy greens. Viability assays are essential to accurately estimate health risk caused by viable parasites that contaminate food. We evaluated the efficacy of reverse transcription quantitative PCR (RT-qPCR), propidium monoazide coupled with (q)PCR, and viability staining using propidium iodide through systematic laboratory spiking experiments for selective detection of viable Cryptosporidium parvum, Giardia enterica, and Toxoplasma gondii. In the presence of only viable protozoa, the RT-qPCR assays could accurately detect two to nine (oo)cysts/g spinach (in 10 g processed). When different proportions of viable and inactivated parasite were spiked, mRNA concentrations correlated with increasing proportions of viable (oo)cysts, although low levels of false-positive mRNA signals were detectable in the presence of high amounts of inactivated protozoa. Our study demonstrated that among the methods tested, RT-qPCR performed more effectively to discriminate viable from inactivated C. parvum, G. enterica and T. gondii on spinach. This application of viability methods on leafy greens can be adopted by the produce industry and regulatory agencies charged with protection of human public health to screen leafy greens for the presence of viable protozoan pathogen contamination.Fil: Kim, Minji. University of California at Davis; Estados UnidosFil: Shapiro, Karen. University of California at Davis; Estados UnidosFil: Rajal, Verónica Beatriz. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Salta. Instituto de Investigaciones para la Industria Química. Universidad Nacional de Salta. Facultad de Ingeniería. Instituto de Investigaciones para la Industria Química; ArgentinaFil: Packham, Andrea. University of California at Davis; Estados UnidosFil: Aguilar, Beatriz. University of California at Davis; Estados UnidosFil: Rueda, Lezlie. University of California at Davis; Estados UnidosFil: Wuertz, Stefan. University of California at Davis; Estados UnidosAcademic Press Ltd - Elsevier Science Ltd2021-10-29info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/175484Kim, Minji; Shapiro, Karen; Rajal, Verónica Beatriz; Packham, Andrea; Aguilar, Beatriz; et al.; Quantification of viable protozoan parasites on leafy greens using molecular methods; Academic Press Ltd - Elsevier Science Ltd; Food Microbiology; 99; 103816; 29-10-2021; 1-80740-0020CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1016/j.fm.2021.103816info:eu-repo/semantics/altIdentifier/url/https://www.sciencedirect.com/science/article/pii/S0740002021000812info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-22T11:18:52Zoai:ri.conicet.gov.ar:11336/175484instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-22 11:18:53.078CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
| dc.title.none.fl_str_mv |
Quantification of viable protozoan parasites on leafy greens using molecular methods |
| title |
Quantification of viable protozoan parasites on leafy greens using molecular methods |
| spellingShingle |
Quantification of viable protozoan parasites on leafy greens using molecular methods Kim, Minji CRYPTOSPORIDIUM GIARDIA PROPIDIUM MONOAZIDE (PMA) REVERSE TRANSCRIPTION QUANTITATIVE PCR (RT-QPCR) TOXOPLASMA VIABILITY |
| title_short |
Quantification of viable protozoan parasites on leafy greens using molecular methods |
| title_full |
Quantification of viable protozoan parasites on leafy greens using molecular methods |
| title_fullStr |
Quantification of viable protozoan parasites on leafy greens using molecular methods |
| title_full_unstemmed |
Quantification of viable protozoan parasites on leafy greens using molecular methods |
| title_sort |
Quantification of viable protozoan parasites on leafy greens using molecular methods |
| dc.creator.none.fl_str_mv |
Kim, Minji Shapiro, Karen Rajal, Verónica Beatriz Packham, Andrea Aguilar, Beatriz Rueda, Lezlie Wuertz, Stefan |
| author |
Kim, Minji |
| author_facet |
Kim, Minji Shapiro, Karen Rajal, Verónica Beatriz Packham, Andrea Aguilar, Beatriz Rueda, Lezlie Wuertz, Stefan |
| author_role |
author |
| author2 |
Shapiro, Karen Rajal, Verónica Beatriz Packham, Andrea Aguilar, Beatriz Rueda, Lezlie Wuertz, Stefan |
| author2_role |
author author author author author author |
| dc.subject.none.fl_str_mv |
CRYPTOSPORIDIUM GIARDIA PROPIDIUM MONOAZIDE (PMA) REVERSE TRANSCRIPTION QUANTITATIVE PCR (RT-QPCR) TOXOPLASMA VIABILITY |
| topic |
CRYPTOSPORIDIUM GIARDIA PROPIDIUM MONOAZIDE (PMA) REVERSE TRANSCRIPTION QUANTITATIVE PCR (RT-QPCR) TOXOPLASMA VIABILITY |
| purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
| dc.description.none.fl_txt_mv |
Protozoan contamination in produce is of growing importance due to their capacity to cause illnesses in consumers of fresh leafy greens. Viability assays are essential to accurately estimate health risk caused by viable parasites that contaminate food. We evaluated the efficacy of reverse transcription quantitative PCR (RT-qPCR), propidium monoazide coupled with (q)PCR, and viability staining using propidium iodide through systematic laboratory spiking experiments for selective detection of viable Cryptosporidium parvum, Giardia enterica, and Toxoplasma gondii. In the presence of only viable protozoa, the RT-qPCR assays could accurately detect two to nine (oo)cysts/g spinach (in 10 g processed). When different proportions of viable and inactivated parasite were spiked, mRNA concentrations correlated with increasing proportions of viable (oo)cysts, although low levels of false-positive mRNA signals were detectable in the presence of high amounts of inactivated protozoa. Our study demonstrated that among the methods tested, RT-qPCR performed more effectively to discriminate viable from inactivated C. parvum, G. enterica and T. gondii on spinach. This application of viability methods on leafy greens can be adopted by the produce industry and regulatory agencies charged with protection of human public health to screen leafy greens for the presence of viable protozoan pathogen contamination. Fil: Kim, Minji. University of California at Davis; Estados Unidos Fil: Shapiro, Karen. University of California at Davis; Estados Unidos Fil: Rajal, Verónica Beatriz. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Salta. Instituto de Investigaciones para la Industria Química. Universidad Nacional de Salta. Facultad de Ingeniería. Instituto de Investigaciones para la Industria Química; Argentina Fil: Packham, Andrea. University of California at Davis; Estados Unidos Fil: Aguilar, Beatriz. University of California at Davis; Estados Unidos Fil: Rueda, Lezlie. University of California at Davis; Estados Unidos Fil: Wuertz, Stefan. University of California at Davis; Estados Unidos |
| description |
Protozoan contamination in produce is of growing importance due to their capacity to cause illnesses in consumers of fresh leafy greens. Viability assays are essential to accurately estimate health risk caused by viable parasites that contaminate food. We evaluated the efficacy of reverse transcription quantitative PCR (RT-qPCR), propidium monoazide coupled with (q)PCR, and viability staining using propidium iodide through systematic laboratory spiking experiments for selective detection of viable Cryptosporidium parvum, Giardia enterica, and Toxoplasma gondii. In the presence of only viable protozoa, the RT-qPCR assays could accurately detect two to nine (oo)cysts/g spinach (in 10 g processed). When different proportions of viable and inactivated parasite were spiked, mRNA concentrations correlated with increasing proportions of viable (oo)cysts, although low levels of false-positive mRNA signals were detectable in the presence of high amounts of inactivated protozoa. Our study demonstrated that among the methods tested, RT-qPCR performed more effectively to discriminate viable from inactivated C. parvum, G. enterica and T. gondii on spinach. This application of viability methods on leafy greens can be adopted by the produce industry and regulatory agencies charged with protection of human public health to screen leafy greens for the presence of viable protozoan pathogen contamination. |
| publishDate |
2021 |
| dc.date.none.fl_str_mv |
2021-10-29 |
| dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
| format |
article |
| status_str |
publishedVersion |
| dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/175484 Kim, Minji; Shapiro, Karen; Rajal, Verónica Beatriz; Packham, Andrea; Aguilar, Beatriz; et al.; Quantification of viable protozoan parasites on leafy greens using molecular methods; Academic Press Ltd - Elsevier Science Ltd; Food Microbiology; 99; 103816; 29-10-2021; 1-8 0740-0020 CONICET Digital CONICET |
| url |
http://hdl.handle.net/11336/175484 |
| identifier_str_mv |
Kim, Minji; Shapiro, Karen; Rajal, Verónica Beatriz; Packham, Andrea; Aguilar, Beatriz; et al.; Quantification of viable protozoan parasites on leafy greens using molecular methods; Academic Press Ltd - Elsevier Science Ltd; Food Microbiology; 99; 103816; 29-10-2021; 1-8 0740-0020 CONICET Digital CONICET |
| dc.language.none.fl_str_mv |
eng |
| language |
eng |
| dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/doi/10.1016/j.fm.2021.103816 info:eu-repo/semantics/altIdentifier/url/https://www.sciencedirect.com/science/article/pii/S0740002021000812 |
| dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
| eu_rights_str_mv |
openAccess |
| rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
| dc.format.none.fl_str_mv |
application/pdf application/pdf |
| dc.publisher.none.fl_str_mv |
Academic Press Ltd - Elsevier Science Ltd |
| publisher.none.fl_str_mv |
Academic Press Ltd - Elsevier Science Ltd |
| dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
| reponame_str |
CONICET Digital (CONICET) |
| collection |
CONICET Digital (CONICET) |
| instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
| repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
| repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
| _version_ |
1846781657870237696 |
| score |
12.982451 |