Towards a natural classification of Botryosphaeriales

Autores
Liu, Jian Kui; Phookamsak, Rungtiwa; Doilom, Mingkhuan; Wikee, Saowanee; Li, Yan Mei; Ariyawansha, Hiran; Boonmee, Saranyaphat; Chomnunti, Putarak; Dai, Dong Qin; Bhat, Jayarama D.; Romero, Andrea Irene; Zhuang, Wen Ying; Monkai, Jutamart; Jones, E. B. Gareth; Chukeatirote, Ekachai; Ko Ko, Thida Win; Zhao, Yong Chang; Wang,Yong; Hyde, Kevin D.
Año de publicación
2012
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
The type specimens of Auerswaldia, Auerswaldiella, Barriopsis, Botryosphaeria, Leptoguignardia, Melanops, Neodeightonia, Phaeobotryon, Phaeobotryosphaeria, Phyllachorella, Pyrenostigme, Saccharata, Sivanesania, Spencermartinsia and Vestergrenia were examined and fresh specimens of Botryosphaeriales were collected from Thailand. This material is used to provide a systematic treatment of Botryosphaeriales based on morphology and phylogeny. Two new genera, Botryobambusa and Cophinforma are introduced and compared with existing genera. Four species new to science, Auerswaldia dothiorella, A. lignicola, Botryosphaeria fusispora and Phaeobotryosphaeria eucalypti, are also described and justified. We accept 29 genera in Botryosphaeriales, with Macrovalsaria being newly placed. In the phylogenetic tree, the 114 strains of Botyrosphaeriales included in the analysis cluster into two major clades with 80 %, 96 % and 1.00 (MP, ML and BY) support, with Clade A containing the family type of Botryosphaeriaceae, and Clade B containing Phyllosticta, Saccharata and Melanops species. This group may represent Phyllostictaceae. In Clade A the taxa analyzed cluster in eight sub-clades (Clades A1-8). Clade A1 comprises three distinct subclusters corresponding to the genera Diplodia (Diplodia Clade), Neodeightonia (Neodeightonia Clade) and Lasiodiplodia (Lasiodiplodia Clade). Clade A2 clusters into three groups representing Phaeobotryosphaeria (100 %), Phaeobotryon (100 %) and Barriopsis (94 %). Clade A3 incorporates 17 strains that cluster into three well-supported genera (Dothiorella (86 %), Spencermartinsia (100 %) and Auerswaldia (63 %); the position of Macrophomina is not stable. Clade A4 is a single lineage (100 %) representing the new genus Botryobambusa. Clade A5 is a well-supported subclade incorporating Neofussicoccum. Clade A6 represents the type species of Botryosphaeria, three other Botryosphaeria species and two other genera, Neoscytalidium and Cophinforma gen. nov. Clade A7 comprises two Pseudofusicoccum species and Clade A8 has two Aplosporella species. These sub-clades may eventually require separate families but this requires analysis of a much larger dataset. Our data advances the understanding of Botryosphaeriales, there is, however, still much research to be carried out with resolution of families and genera, linkage of sexual and asexual morphs and differentiation of cryptic species.
Fil: Liu, Jian Kui. Mae Fah Luang University; Tailandia. Chinese Academy of Forestry; China
Fil: Phookamsak, Rungtiwa. Mae Fah Luang University; Tailandia
Fil: Doilom, Mingkhuan. Mae Fah Luang University; Tailandia
Fil: Wikee, Saowanee. Mae Fah Luang University; Tailandia
Fil: Li, Yan Mei. Chinese Academy of Forestry; China
Fil: Ariyawansha, Hiran. Mae Fah Luang University; Tailandia
Fil: Boonmee, Saranyaphat. Mae Fah Luang University; Tailandia
Fil: Chomnunti, Putarak. Mae Fah Luang University; Tailandia
Fil: Dai, Dong Qin. Mae Fah Luang University; Tailandia
Fil: Bhat, Jayarama D.. Mae Fah Luang University; Tailandia
Fil: Romero, Andrea Irene. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Micología y Botánica. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Micología y Botánica; Argentina
Fil: Zhuang, Wen Ying. Chinese Academy of Sciences; República de China
Fil: Monkai, Jutamart. Mae Fah Luang University; Tailandia
Fil: Jones, E. B. Gareth. University of Malaya; Malasia
Fil: Chukeatirote, Ekachai. Mae Fah Luang University; Tailandia
Fil: Ko Ko, Thida Win. Mae Fah Luang University; Tailandia
Fil: Zhao, Yong Chang. Yunnan Academy of Agricultural Science; China
Fil: Wang,Yong. Guizhou University; China
Fil: Hyde, Kevin D.. Chinese Academy of Forestry; China. Mae Fah Luang University; Tailandia
Materia
Asexual Morphs
Botryosphaeria
Botryosphaeriaceae
Classification
Diplodia
Generic Types
Lasiodiplodia
Multi-Gene Phylogeny
New Genera
Phyllosticta
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/79989

id CONICETDig_9db876c8efbda1c263daed8b8223b8cc
oai_identifier_str oai:ri.conicet.gov.ar:11336/79989
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Towards a natural classification of BotryosphaerialesLiu, Jian KuiPhookamsak, RungtiwaDoilom, MingkhuanWikee, SaowaneeLi, Yan MeiAriyawansha, HiranBoonmee, SaranyaphatChomnunti, PutarakDai, Dong QinBhat, Jayarama D.Romero, Andrea IreneZhuang, Wen YingMonkai, JutamartJones, E. B. GarethChukeatirote, EkachaiKo Ko, Thida WinZhao, Yong ChangWang,YongHyde, Kevin D.Asexual MorphsBotryosphaeriaBotryosphaeriaceaeClassificationDiplodiaGeneric TypesLasiodiplodiaMulti-Gene PhylogenyNew GeneraPhyllostictahttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1The type specimens of Auerswaldia, Auerswaldiella, Barriopsis, Botryosphaeria, Leptoguignardia, Melanops, Neodeightonia, Phaeobotryon, Phaeobotryosphaeria, Phyllachorella, Pyrenostigme, Saccharata, Sivanesania, Spencermartinsia and Vestergrenia were examined and fresh specimens of Botryosphaeriales were collected from Thailand. This material is used to provide a systematic treatment of Botryosphaeriales based on morphology and phylogeny. Two new genera, Botryobambusa and Cophinforma are introduced and compared with existing genera. Four species new to science, Auerswaldia dothiorella, A. lignicola, Botryosphaeria fusispora and Phaeobotryosphaeria eucalypti, are also described and justified. We accept 29 genera in Botryosphaeriales, with Macrovalsaria being newly placed. In the phylogenetic tree, the 114 strains of Botyrosphaeriales included in the analysis cluster into two major clades with 80 %, 96 % and 1.00 (MP, ML and BY) support, with Clade A containing the family type of Botryosphaeriaceae, and Clade B containing Phyllosticta, Saccharata and Melanops species. This group may represent Phyllostictaceae. In Clade A the taxa analyzed cluster in eight sub-clades (Clades A1-8). Clade A1 comprises three distinct subclusters corresponding to the genera Diplodia (Diplodia Clade), Neodeightonia (Neodeightonia Clade) and Lasiodiplodia (Lasiodiplodia Clade). Clade A2 clusters into three groups representing Phaeobotryosphaeria (100 %), Phaeobotryon (100 %) and Barriopsis (94 %). Clade A3 incorporates 17 strains that cluster into three well-supported genera (Dothiorella (86 %), Spencermartinsia (100 %) and Auerswaldia (63 %); the position of Macrophomina is not stable. Clade A4 is a single lineage (100 %) representing the new genus Botryobambusa. Clade A5 is a well-supported subclade incorporating Neofussicoccum. Clade A6 represents the type species of Botryosphaeria, three other Botryosphaeria species and two other genera, Neoscytalidium and Cophinforma gen. nov. Clade A7 comprises two Pseudofusicoccum species and Clade A8 has two Aplosporella species. These sub-clades may eventually require separate families but this requires analysis of a much larger dataset. Our data advances the understanding of Botryosphaeriales, there is, however, still much research to be carried out with resolution of families and genera, linkage of sexual and asexual morphs and differentiation of cryptic species.Fil: Liu, Jian Kui. Mae Fah Luang University; Tailandia. Chinese Academy of Forestry; ChinaFil: Phookamsak, Rungtiwa. Mae Fah Luang University; TailandiaFil: Doilom, Mingkhuan. Mae Fah Luang University; TailandiaFil: Wikee, Saowanee. Mae Fah Luang University; TailandiaFil: Li, Yan Mei. Chinese Academy of Forestry; ChinaFil: Ariyawansha, Hiran. Mae Fah Luang University; TailandiaFil: Boonmee, Saranyaphat. Mae Fah Luang University; TailandiaFil: Chomnunti, Putarak. Mae Fah Luang University; TailandiaFil: Dai, Dong Qin. Mae Fah Luang University; TailandiaFil: Bhat, Jayarama D.. Mae Fah Luang University; TailandiaFil: Romero, Andrea Irene. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Micología y Botánica. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Micología y Botánica; ArgentinaFil: Zhuang, Wen Ying. Chinese Academy of Sciences; República de ChinaFil: Monkai, Jutamart. Mae Fah Luang University; TailandiaFil: Jones, E. B. Gareth. University of Malaya; MalasiaFil: Chukeatirote, Ekachai. Mae Fah Luang University; TailandiaFil: Ko Ko, Thida Win. Mae Fah Luang University; TailandiaFil: Zhao, Yong Chang. Yunnan Academy of Agricultural Science; ChinaFil: Wang,Yong. Guizhou University; ChinaFil: Hyde, Kevin D.. Chinese Academy of Forestry; China. Mae Fah Luang University; TailandiaKunming University of Science and Technology2012-11-10info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/79989Liu, Jian Kui; Phookamsak, Rungtiwa; Doilom, Mingkhuan; Wikee, Saowanee; Li, Yan Mei; et al.; Towards a natural classification of Botryosphaeriales; Kunming University of Science and Technology; Fungal Diversity; 57; 1; 10-11-2012; 149-2101560-27451878-9129CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://link.springer.com/article/10.1007/s13225-012-0207-4info:eu-repo/semantics/altIdentifier/doi/10.1007/s13225-012-0207-4info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:43:44Zoai:ri.conicet.gov.ar:11336/79989instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:43:45.28CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Towards a natural classification of Botryosphaeriales
title Towards a natural classification of Botryosphaeriales
spellingShingle Towards a natural classification of Botryosphaeriales
Liu, Jian Kui
Asexual Morphs
Botryosphaeria
Botryosphaeriaceae
Classification
Diplodia
Generic Types
Lasiodiplodia
Multi-Gene Phylogeny
New Genera
Phyllosticta
title_short Towards a natural classification of Botryosphaeriales
title_full Towards a natural classification of Botryosphaeriales
title_fullStr Towards a natural classification of Botryosphaeriales
title_full_unstemmed Towards a natural classification of Botryosphaeriales
title_sort Towards a natural classification of Botryosphaeriales
dc.creator.none.fl_str_mv Liu, Jian Kui
Phookamsak, Rungtiwa
Doilom, Mingkhuan
Wikee, Saowanee
Li, Yan Mei
Ariyawansha, Hiran
Boonmee, Saranyaphat
Chomnunti, Putarak
Dai, Dong Qin
Bhat, Jayarama D.
Romero, Andrea Irene
Zhuang, Wen Ying
Monkai, Jutamart
Jones, E. B. Gareth
Chukeatirote, Ekachai
Ko Ko, Thida Win
Zhao, Yong Chang
Wang,Yong
Hyde, Kevin D.
author Liu, Jian Kui
author_facet Liu, Jian Kui
Phookamsak, Rungtiwa
Doilom, Mingkhuan
Wikee, Saowanee
Li, Yan Mei
Ariyawansha, Hiran
Boonmee, Saranyaphat
Chomnunti, Putarak
Dai, Dong Qin
Bhat, Jayarama D.
Romero, Andrea Irene
Zhuang, Wen Ying
Monkai, Jutamart
Jones, E. B. Gareth
Chukeatirote, Ekachai
Ko Ko, Thida Win
Zhao, Yong Chang
Wang,Yong
Hyde, Kevin D.
author_role author
author2 Phookamsak, Rungtiwa
Doilom, Mingkhuan
Wikee, Saowanee
Li, Yan Mei
Ariyawansha, Hiran
Boonmee, Saranyaphat
Chomnunti, Putarak
Dai, Dong Qin
Bhat, Jayarama D.
Romero, Andrea Irene
Zhuang, Wen Ying
Monkai, Jutamart
Jones, E. B. Gareth
Chukeatirote, Ekachai
Ko Ko, Thida Win
Zhao, Yong Chang
Wang,Yong
Hyde, Kevin D.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Asexual Morphs
Botryosphaeria
Botryosphaeriaceae
Classification
Diplodia
Generic Types
Lasiodiplodia
Multi-Gene Phylogeny
New Genera
Phyllosticta
topic Asexual Morphs
Botryosphaeria
Botryosphaeriaceae
Classification
Diplodia
Generic Types
Lasiodiplodia
Multi-Gene Phylogeny
New Genera
Phyllosticta
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv The type specimens of Auerswaldia, Auerswaldiella, Barriopsis, Botryosphaeria, Leptoguignardia, Melanops, Neodeightonia, Phaeobotryon, Phaeobotryosphaeria, Phyllachorella, Pyrenostigme, Saccharata, Sivanesania, Spencermartinsia and Vestergrenia were examined and fresh specimens of Botryosphaeriales were collected from Thailand. This material is used to provide a systematic treatment of Botryosphaeriales based on morphology and phylogeny. Two new genera, Botryobambusa and Cophinforma are introduced and compared with existing genera. Four species new to science, Auerswaldia dothiorella, A. lignicola, Botryosphaeria fusispora and Phaeobotryosphaeria eucalypti, are also described and justified. We accept 29 genera in Botryosphaeriales, with Macrovalsaria being newly placed. In the phylogenetic tree, the 114 strains of Botyrosphaeriales included in the analysis cluster into two major clades with 80 %, 96 % and 1.00 (MP, ML and BY) support, with Clade A containing the family type of Botryosphaeriaceae, and Clade B containing Phyllosticta, Saccharata and Melanops species. This group may represent Phyllostictaceae. In Clade A the taxa analyzed cluster in eight sub-clades (Clades A1-8). Clade A1 comprises three distinct subclusters corresponding to the genera Diplodia (Diplodia Clade), Neodeightonia (Neodeightonia Clade) and Lasiodiplodia (Lasiodiplodia Clade). Clade A2 clusters into three groups representing Phaeobotryosphaeria (100 %), Phaeobotryon (100 %) and Barriopsis (94 %). Clade A3 incorporates 17 strains that cluster into three well-supported genera (Dothiorella (86 %), Spencermartinsia (100 %) and Auerswaldia (63 %); the position of Macrophomina is not stable. Clade A4 is a single lineage (100 %) representing the new genus Botryobambusa. Clade A5 is a well-supported subclade incorporating Neofussicoccum. Clade A6 represents the type species of Botryosphaeria, three other Botryosphaeria species and two other genera, Neoscytalidium and Cophinforma gen. nov. Clade A7 comprises two Pseudofusicoccum species and Clade A8 has two Aplosporella species. These sub-clades may eventually require separate families but this requires analysis of a much larger dataset. Our data advances the understanding of Botryosphaeriales, there is, however, still much research to be carried out with resolution of families and genera, linkage of sexual and asexual morphs and differentiation of cryptic species.
Fil: Liu, Jian Kui. Mae Fah Luang University; Tailandia. Chinese Academy of Forestry; China
Fil: Phookamsak, Rungtiwa. Mae Fah Luang University; Tailandia
Fil: Doilom, Mingkhuan. Mae Fah Luang University; Tailandia
Fil: Wikee, Saowanee. Mae Fah Luang University; Tailandia
Fil: Li, Yan Mei. Chinese Academy of Forestry; China
Fil: Ariyawansha, Hiran. Mae Fah Luang University; Tailandia
Fil: Boonmee, Saranyaphat. Mae Fah Luang University; Tailandia
Fil: Chomnunti, Putarak. Mae Fah Luang University; Tailandia
Fil: Dai, Dong Qin. Mae Fah Luang University; Tailandia
Fil: Bhat, Jayarama D.. Mae Fah Luang University; Tailandia
Fil: Romero, Andrea Irene. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Micología y Botánica. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Micología y Botánica; Argentina
Fil: Zhuang, Wen Ying. Chinese Academy of Sciences; República de China
Fil: Monkai, Jutamart. Mae Fah Luang University; Tailandia
Fil: Jones, E. B. Gareth. University of Malaya; Malasia
Fil: Chukeatirote, Ekachai. Mae Fah Luang University; Tailandia
Fil: Ko Ko, Thida Win. Mae Fah Luang University; Tailandia
Fil: Zhao, Yong Chang. Yunnan Academy of Agricultural Science; China
Fil: Wang,Yong. Guizhou University; China
Fil: Hyde, Kevin D.. Chinese Academy of Forestry; China. Mae Fah Luang University; Tailandia
description The type specimens of Auerswaldia, Auerswaldiella, Barriopsis, Botryosphaeria, Leptoguignardia, Melanops, Neodeightonia, Phaeobotryon, Phaeobotryosphaeria, Phyllachorella, Pyrenostigme, Saccharata, Sivanesania, Spencermartinsia and Vestergrenia were examined and fresh specimens of Botryosphaeriales were collected from Thailand. This material is used to provide a systematic treatment of Botryosphaeriales based on morphology and phylogeny. Two new genera, Botryobambusa and Cophinforma are introduced and compared with existing genera. Four species new to science, Auerswaldia dothiorella, A. lignicola, Botryosphaeria fusispora and Phaeobotryosphaeria eucalypti, are also described and justified. We accept 29 genera in Botryosphaeriales, with Macrovalsaria being newly placed. In the phylogenetic tree, the 114 strains of Botyrosphaeriales included in the analysis cluster into two major clades with 80 %, 96 % and 1.00 (MP, ML and BY) support, with Clade A containing the family type of Botryosphaeriaceae, and Clade B containing Phyllosticta, Saccharata and Melanops species. This group may represent Phyllostictaceae. In Clade A the taxa analyzed cluster in eight sub-clades (Clades A1-8). Clade A1 comprises three distinct subclusters corresponding to the genera Diplodia (Diplodia Clade), Neodeightonia (Neodeightonia Clade) and Lasiodiplodia (Lasiodiplodia Clade). Clade A2 clusters into three groups representing Phaeobotryosphaeria (100 %), Phaeobotryon (100 %) and Barriopsis (94 %). Clade A3 incorporates 17 strains that cluster into three well-supported genera (Dothiorella (86 %), Spencermartinsia (100 %) and Auerswaldia (63 %); the position of Macrophomina is not stable. Clade A4 is a single lineage (100 %) representing the new genus Botryobambusa. Clade A5 is a well-supported subclade incorporating Neofussicoccum. Clade A6 represents the type species of Botryosphaeria, three other Botryosphaeria species and two other genera, Neoscytalidium and Cophinforma gen. nov. Clade A7 comprises two Pseudofusicoccum species and Clade A8 has two Aplosporella species. These sub-clades may eventually require separate families but this requires analysis of a much larger dataset. Our data advances the understanding of Botryosphaeriales, there is, however, still much research to be carried out with resolution of families and genera, linkage of sexual and asexual morphs and differentiation of cryptic species.
publishDate 2012
dc.date.none.fl_str_mv 2012-11-10
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/79989
Liu, Jian Kui; Phookamsak, Rungtiwa; Doilom, Mingkhuan; Wikee, Saowanee; Li, Yan Mei; et al.; Towards a natural classification of Botryosphaeriales; Kunming University of Science and Technology; Fungal Diversity; 57; 1; 10-11-2012; 149-210
1560-2745
1878-9129
CONICET Digital
CONICET
url http://hdl.handle.net/11336/79989
identifier_str_mv Liu, Jian Kui; Phookamsak, Rungtiwa; Doilom, Mingkhuan; Wikee, Saowanee; Li, Yan Mei; et al.; Towards a natural classification of Botryosphaeriales; Kunming University of Science and Technology; Fungal Diversity; 57; 1; 10-11-2012; 149-210
1560-2745
1878-9129
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://link.springer.com/article/10.1007/s13225-012-0207-4
info:eu-repo/semantics/altIdentifier/doi/10.1007/s13225-012-0207-4
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Kunming University of Science and Technology
publisher.none.fl_str_mv Kunming University of Science and Technology
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
_version_ 1844614473468346368
score 13.070432