Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and Xylariaceae

Autores
Daranagama, Dinushani A; Hyde, Kevin D.; Sir, Esteban Benjamin; Thambugala, Kasun M.; Tian, Qing; Samarakoon, Milan C.; McKenzie, Eric H. C.; Jayasiri, Subashini C.; Tibpromma, Saowaluck; Bhat, Jayarama D.; Liu, XingZhong; Stadler, Marc
Año de publicación
2017
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Species and generic recognition in the orderXylariales has been uncertain due to lack of molecular datafrom authentic cultures, as well as overlapping morphologicalcharacteristics. In this study, we revise the familiesGraphostromataceae, Hypoxylaceae, Lopadostomataceaeand Xylariaceae in Xylariales. Our study is based on DNAsequence data derived from living cultures of fresh isolates,data from GenBank and morphological observation of typeand worldwide herbarium specimens. We also collectednew specimens from Germany, Italy and Thailand. Combinedanalyses of ITS, LSU, RPB2 and b-tubulin sequencedata were used to reconstruct the molecular phylogeny ofthe above families. Generic and familiar boundariesbetween these families are revised and presented in anupdated combined phylogenetic tree. We accept six generain Graphostromataceae, 19 genera in Hypoxylaceae, fourin Lopadostomataceae and 37 genera in Xylariaceae. Fivegenera previously treated in Xylariaceae are placed inAmphisphaeriales genera incertae sedis and seven generaare placed in Xylariales genera incertae sedis. Two generaare placed in Sordariomycetes genera incertae sedis, whilefour genera are placed as Xylariomycetidae genera incertaesedis. Three genera are considered as doubtful. Barrmaeliaand Cannonia, presently included in Xylariaceae aretransferred to Diatrypaceae and Coniochaetales respectively,based on their morphology and phylogeny. Areolosporaand Myconeesia are excluded from Xylariaceaeand synonymized with Phaeosporis and Anthostomellarespectively. Updated descriptions and illustrations areprovided for all taxa with notes provided on each genus.Excluded and doubtful genera are listed with notes on theirtaxonomy and phylogeny. Taxonomic keys are providedfor all revised families with morphological details forgenera within the families.
Fil: Daranagama, Dinushani A. Mae Fah Luang University; Tailandia. Institute of Microbiology Chinese Academy of Sciences; China
Fil: Hyde, Kevin D.. Mae Fah Luang University; Tailandia
Fil: Sir, Esteban Benjamin. Fund.Miguel Lillo. Dir.de Botanica. Laboratorio Criptogámico; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Thambugala, Kasun M.. Guizhou Academy of Agricultural Sciences; China. Mae Fah Luang University; Tailandia
Fil: Tian, Qing. Mae Fah Luang University; Tailandia
Fil: Samarakoon, Milan C.. Mae Fah Luang University; Tailandia
Fil: McKenzie, Eric H. C.. Manaaki Whenua Landcare Research; Nueva Zelanda
Fil: Jayasiri, Subashini C.. Center Of Excellence In Fungal Research-mflu; Tailandia
Fil: Tibpromma, Saowaluck. Manaaki Whenua Landcare Research; Nueva Zelanda
Fil: Bhat, Jayarama D.. Goa University; India
Fil: Liu, XingZhong. Institute of Microbiology Chinese Academy of Sciences ; China
Fil: Stadler, Marc. Helmholtz Centre for Infection Research; Alemania
Materia
CLASSIFICATION
GENERA
PHYLOGENY
XYLARIOMYCETIDAE
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/102268
Acceder
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oai_identifier_str oai:ri.conicet.gov.ar:11336/102268
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and XylariaceaeDaranagama, Dinushani AHyde, Kevin D.Sir, Esteban BenjaminThambugala, Kasun M.Tian, QingSamarakoon, Milan C.McKenzie, Eric H. C.Jayasiri, Subashini C.Tibpromma, SaowaluckBhat, Jayarama D.Liu, XingZhongStadler, MarcCLASSIFICATIONGENERAPHYLOGENYXYLARIOMYCETIDAEhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Species and generic recognition in the orderXylariales has been uncertain due to lack of molecular datafrom authentic cultures, as well as overlapping morphologicalcharacteristics. In this study, we revise the familiesGraphostromataceae, Hypoxylaceae, Lopadostomataceaeand Xylariaceae in Xylariales. Our study is based on DNAsequence data derived from living cultures of fresh isolates,data from GenBank and morphological observation of typeand worldwide herbarium specimens. We also collectednew specimens from Germany, Italy and Thailand. Combinedanalyses of ITS, LSU, RPB2 and b-tubulin sequencedata were used to reconstruct the molecular phylogeny ofthe above families. Generic and familiar boundariesbetween these families are revised and presented in anupdated combined phylogenetic tree. We accept six generain Graphostromataceae, 19 genera in Hypoxylaceae, fourin Lopadostomataceae and 37 genera in Xylariaceae. Fivegenera previously treated in Xylariaceae are placed inAmphisphaeriales genera incertae sedis and seven generaare placed in Xylariales genera incertae sedis. Two generaare placed in Sordariomycetes genera incertae sedis, whilefour genera are placed as Xylariomycetidae genera incertaesedis. Three genera are considered as doubtful. Barrmaeliaand Cannonia, presently included in Xylariaceae aretransferred to Diatrypaceae and Coniochaetales respectively,based on their morphology and phylogeny. Areolosporaand Myconeesia are excluded from Xylariaceaeand synonymized with Phaeosporis and Anthostomellarespectively. Updated descriptions and illustrations areprovided for all taxa with notes provided on each genus.Excluded and doubtful genera are listed with notes on theirtaxonomy and phylogeny. Taxonomic keys are providedfor all revised families with morphological details forgenera within the families.Fil: Daranagama, Dinushani A. Mae Fah Luang University; Tailandia. Institute of Microbiology Chinese Academy of Sciences; ChinaFil: Hyde, Kevin D.. Mae Fah Luang University; TailandiaFil: Sir, Esteban Benjamin. Fund.Miguel Lillo. Dir.de Botanica. Laboratorio Criptogámico; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Thambugala, Kasun M.. Guizhou Academy of Agricultural Sciences; China. Mae Fah Luang University; TailandiaFil: Tian, Qing. Mae Fah Luang University; TailandiaFil: Samarakoon, Milan C.. Mae Fah Luang University; TailandiaFil: McKenzie, Eric H. C.. Manaaki Whenua Landcare Research; Nueva ZelandaFil: Jayasiri, Subashini C.. Center Of Excellence In Fungal Research-mflu; TailandiaFil: Tibpromma, Saowaluck. Manaaki Whenua Landcare Research; Nueva ZelandaFil: Bhat, Jayarama D.. Goa University; IndiaFil: Liu, XingZhong. Institute of Microbiology Chinese Academy of Sciences ; ChinaFil: Stadler, Marc. Helmholtz Centre for Infection Research; AlemaniaKunming University of Science and Technology2017-09info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/mswordapplication/pdfhttp://hdl.handle.net/11336/102268Daranagama, Dinushani A; Hyde, Kevin D.; Sir, Esteban Benjamin; Thambugala, Kasun M.; Tian, Qing; et al.; Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and Xylariaceae; Kunming University of Science and Technology; Fungal Diversity; 88; 1; 9-2017; 1-1651560-2745CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1007/s13225-017-0388-yinfo:eu-repo/semantics/altIdentifier/url/https://link.springer.com/article/10.1007%2Fs13225-017-0388-yinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:02:01Zoai:ri.conicet.gov.ar:11336/102268instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:02:01.894CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and Xylariaceae
title Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and Xylariaceae
spellingShingle Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and Xylariaceae
Daranagama, Dinushani A
CLASSIFICATION
GENERA
PHYLOGENY
XYLARIOMYCETIDAE
title_short Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and Xylariaceae
title_full Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and Xylariaceae
title_fullStr Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and Xylariaceae
title_full_unstemmed Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and Xylariaceae
title_sort Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and Xylariaceae
dc.creator.none.fl_str_mv Daranagama, Dinushani A
Hyde, Kevin D.
Sir, Esteban Benjamin
Thambugala, Kasun M.
Tian, Qing
Samarakoon, Milan C.
McKenzie, Eric H. C.
Jayasiri, Subashini C.
Tibpromma, Saowaluck
Bhat, Jayarama D.
Liu, XingZhong
Stadler, Marc
author Daranagama, Dinushani A
author_facet Daranagama, Dinushani A
Hyde, Kevin D.
Sir, Esteban Benjamin
Thambugala, Kasun M.
Tian, Qing
Samarakoon, Milan C.
McKenzie, Eric H. C.
Jayasiri, Subashini C.
Tibpromma, Saowaluck
Bhat, Jayarama D.
Liu, XingZhong
Stadler, Marc
author_role author
author2 Hyde, Kevin D.
Sir, Esteban Benjamin
Thambugala, Kasun M.
Tian, Qing
Samarakoon, Milan C.
McKenzie, Eric H. C.
Jayasiri, Subashini C.
Tibpromma, Saowaluck
Bhat, Jayarama D.
Liu, XingZhong
Stadler, Marc
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv CLASSIFICATION
GENERA
PHYLOGENY
XYLARIOMYCETIDAE
topic CLASSIFICATION
GENERA
PHYLOGENY
XYLARIOMYCETIDAE
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Species and generic recognition in the orderXylariales has been uncertain due to lack of molecular datafrom authentic cultures, as well as overlapping morphologicalcharacteristics. In this study, we revise the familiesGraphostromataceae, Hypoxylaceae, Lopadostomataceaeand Xylariaceae in Xylariales. Our study is based on DNAsequence data derived from living cultures of fresh isolates,data from GenBank and morphological observation of typeand worldwide herbarium specimens. We also collectednew specimens from Germany, Italy and Thailand. Combinedanalyses of ITS, LSU, RPB2 and b-tubulin sequencedata were used to reconstruct the molecular phylogeny ofthe above families. Generic and familiar boundariesbetween these families are revised and presented in anupdated combined phylogenetic tree. We accept six generain Graphostromataceae, 19 genera in Hypoxylaceae, fourin Lopadostomataceae and 37 genera in Xylariaceae. Fivegenera previously treated in Xylariaceae are placed inAmphisphaeriales genera incertae sedis and seven generaare placed in Xylariales genera incertae sedis. Two generaare placed in Sordariomycetes genera incertae sedis, whilefour genera are placed as Xylariomycetidae genera incertaesedis. Three genera are considered as doubtful. Barrmaeliaand Cannonia, presently included in Xylariaceae aretransferred to Diatrypaceae and Coniochaetales respectively,based on their morphology and phylogeny. Areolosporaand Myconeesia are excluded from Xylariaceaeand synonymized with Phaeosporis and Anthostomellarespectively. Updated descriptions and illustrations areprovided for all taxa with notes provided on each genus.Excluded and doubtful genera are listed with notes on theirtaxonomy and phylogeny. Taxonomic keys are providedfor all revised families with morphological details forgenera within the families.
Fil: Daranagama, Dinushani A. Mae Fah Luang University; Tailandia. Institute of Microbiology Chinese Academy of Sciences; China
Fil: Hyde, Kevin D.. Mae Fah Luang University; Tailandia
Fil: Sir, Esteban Benjamin. Fund.Miguel Lillo. Dir.de Botanica. Laboratorio Criptogámico; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Thambugala, Kasun M.. Guizhou Academy of Agricultural Sciences; China. Mae Fah Luang University; Tailandia
Fil: Tian, Qing. Mae Fah Luang University; Tailandia
Fil: Samarakoon, Milan C.. Mae Fah Luang University; Tailandia
Fil: McKenzie, Eric H. C.. Manaaki Whenua Landcare Research; Nueva Zelanda
Fil: Jayasiri, Subashini C.. Center Of Excellence In Fungal Research-mflu; Tailandia
Fil: Tibpromma, Saowaluck. Manaaki Whenua Landcare Research; Nueva Zelanda
Fil: Bhat, Jayarama D.. Goa University; India
Fil: Liu, XingZhong. Institute of Microbiology Chinese Academy of Sciences ; China
Fil: Stadler, Marc. Helmholtz Centre for Infection Research; Alemania
description Species and generic recognition in the orderXylariales has been uncertain due to lack of molecular datafrom authentic cultures, as well as overlapping morphologicalcharacteristics. In this study, we revise the familiesGraphostromataceae, Hypoxylaceae, Lopadostomataceaeand Xylariaceae in Xylariales. Our study is based on DNAsequence data derived from living cultures of fresh isolates,data from GenBank and morphological observation of typeand worldwide herbarium specimens. We also collectednew specimens from Germany, Italy and Thailand. Combinedanalyses of ITS, LSU, RPB2 and b-tubulin sequencedata were used to reconstruct the molecular phylogeny ofthe above families. Generic and familiar boundariesbetween these families are revised and presented in anupdated combined phylogenetic tree. We accept six generain Graphostromataceae, 19 genera in Hypoxylaceae, fourin Lopadostomataceae and 37 genera in Xylariaceae. Fivegenera previously treated in Xylariaceae are placed inAmphisphaeriales genera incertae sedis and seven generaare placed in Xylariales genera incertae sedis. Two generaare placed in Sordariomycetes genera incertae sedis, whilefour genera are placed as Xylariomycetidae genera incertaesedis. Three genera are considered as doubtful. Barrmaeliaand Cannonia, presently included in Xylariaceae aretransferred to Diatrypaceae and Coniochaetales respectively,based on their morphology and phylogeny. Areolosporaand Myconeesia are excluded from Xylariaceaeand synonymized with Phaeosporis and Anthostomellarespectively. Updated descriptions and illustrations areprovided for all taxa with notes provided on each genus.Excluded and doubtful genera are listed with notes on theirtaxonomy and phylogeny. Taxonomic keys are providedfor all revised families with morphological details forgenera within the families.
publishDate 2017
dc.date.none.fl_str_mv 2017-09
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/102268
Daranagama, Dinushani A; Hyde, Kevin D.; Sir, Esteban Benjamin; Thambugala, Kasun M.; Tian, Qing; et al.; Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and Xylariaceae; Kunming University of Science and Technology; Fungal Diversity; 88; 1; 9-2017; 1-165
1560-2745
CONICET Digital
CONICET
url http://hdl.handle.net/11336/102268
identifier_str_mv Daranagama, Dinushani A; Hyde, Kevin D.; Sir, Esteban Benjamin; Thambugala, Kasun M.; Tian, Qing; et al.; Towards a natural classification and backbone tree for Graphostromataceae, Hypoxylaceae, Lopadostomataceae and Xylariaceae; Kunming University of Science and Technology; Fungal Diversity; 88; 1; 9-2017; 1-165
1560-2745
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1007/s13225-017-0388-y
info:eu-repo/semantics/altIdentifier/url/https://link.springer.com/article/10.1007%2Fs13225-017-0388-y
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/msword
application/pdf
dc.publisher.none.fl_str_mv Kunming University of Science and Technology
publisher.none.fl_str_mv Kunming University of Science and Technology
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.070432

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