Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimates

Autores
Da Silva, Fagner M.; Miño, Carolina Isabel; Izbicki, Rafael; Del Lama, Sílvia Nassif
Año de publicación
2018
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Detecting trends in population size fluctuations is a major focus in ecology, evolution,and conservation biology. Populations of colonial waterbirds have been monitoredusing demographic approaches to determine annual census size (Na). We propose theaddition of genetic estimates of the effective number of breeders (Nb) as indirectmeasures of the risk of loss of genetic diversity to improve the evaluation of demographics and increase the accuracy of trend estimates in breeding colonies. Here, weinvestigated which methods of the estimation of Nb are more precise under conditions of moderate genetic diversity, limited sample sizes and few microsatellite loci,as often occurs with natural populations. We used the wood stork as a model speciesand we offered a workflow that researchers can follow for monitoring bird breedingcolonies. Our approach started with simulations using five estimators of Nb and thetheoretical results were validated with empirical data collected from breeding colonies settled in the Brazilian Pantanal wetland. In parallel, we estimated census sizeusing a corrected method based on counting active nests. Both in simulations and innatural populations, the approximate Bayesian computation (ABC) and sibship assignment (SA) methods yielded more precise estimates than the linkage disequilibrium, heterozygosity excess, and molecular coancestry methods. In particular, theABC method performed best with few loci and small sample sizes, while the otherestimators required larger sample sizes and at least 13 loci to not underestimate Nb.Moreover, according to our Nb/Na estimates (values were often =0.1), the wood storkcolonies evaluated could be facing the loss of genetic diversity. We demonstrate thatthe combination of genetic and census estimates is a useful approach for monitoringnatural breeding bird populations. This methodology has been recommended forpopulations of rare species or with a known history of population decline to supportconservation efforts.
Fil: Da Silva, Fagner M.. Universidade Federal do São Carlos; Brasil
Fil: Miño, Carolina Isabel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú | Universidad Nacional de Misiones. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú; Argentina
Fil: Izbicki, Rafael. Universidade Federal do São Carlos; Brasil
Fil: Del Lama, Sílvia Nassif. Universidade Federal do São Carlos; Brasil
Materia
CONSERVATION GENETICS
EFFECTIVE SIZE
MICROSATELLITES
MYCTERIA AMERICANA
SIMULATIONS
SINGLE-SAMPLE ESTIMATORS
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-nd/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/82160

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network_name_str CONICET Digital (CONICET)
spelling Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimatesDa Silva, Fagner M.Miño, Carolina IsabelIzbicki, RafaelDel Lama, Sílvia NassifCONSERVATION GENETICSEFFECTIVE SIZEMICROSATELLITESMYCTERIA AMERICANASIMULATIONSSINGLE-SAMPLE ESTIMATORShttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Detecting trends in population size fluctuations is a major focus in ecology, evolution,and conservation biology. Populations of colonial waterbirds have been monitoredusing demographic approaches to determine annual census size (Na). We propose theaddition of genetic estimates of the effective number of breeders (Nb) as indirectmeasures of the risk of loss of genetic diversity to improve the evaluation of demographics and increase the accuracy of trend estimates in breeding colonies. Here, weinvestigated which methods of the estimation of Nb are more precise under conditions of moderate genetic diversity, limited sample sizes and few microsatellite loci,as often occurs with natural populations. We used the wood stork as a model speciesand we offered a workflow that researchers can follow for monitoring bird breedingcolonies. Our approach started with simulations using five estimators of Nb and thetheoretical results were validated with empirical data collected from breeding colonies settled in the Brazilian Pantanal wetland. In parallel, we estimated census sizeusing a corrected method based on counting active nests. Both in simulations and innatural populations, the approximate Bayesian computation (ABC) and sibship assignment (SA) methods yielded more precise estimates than the linkage disequilibrium, heterozygosity excess, and molecular coancestry methods. In particular, theABC method performed best with few loci and small sample sizes, while the otherestimators required larger sample sizes and at least 13 loci to not underestimate Nb.Moreover, according to our Nb/Na estimates (values were often =0.1), the wood storkcolonies evaluated could be facing the loss of genetic diversity. We demonstrate thatthe combination of genetic and census estimates is a useful approach for monitoringnatural breeding bird populations. This methodology has been recommended forpopulations of rare species or with a known history of population decline to supportconservation efforts.Fil: Da Silva, Fagner M.. Universidade Federal do São Carlos; BrasilFil: Miño, Carolina Isabel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú | Universidad Nacional de Misiones. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú; ArgentinaFil: Izbicki, Rafael. Universidade Federal do São Carlos; BrasilFil: Del Lama, Sílvia Nassif. Universidade Federal do São Carlos; BrasilWiley2018-06info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/zipapplication/pdfhttp://hdl.handle.net/11336/82160Da Silva, Fagner M.; Miño, Carolina Isabel; Izbicki, Rafael; Del Lama, Sílvia Nassif; Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimates; Wiley; Ecology and Evolution; 8; 16; 6-2018; 8088-81012045-77582045-7758CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/abs/10.1002/ece3.4347info:eu-repo/semantics/altIdentifier/doi/10.1002/ece3.4347info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:02:18Zoai:ri.conicet.gov.ar:11336/82160instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:02:18.742CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimates
title Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimates
spellingShingle Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimates
Da Silva, Fagner M.
CONSERVATION GENETICS
EFFECTIVE SIZE
MICROSATELLITES
MYCTERIA AMERICANA
SIMULATIONS
SINGLE-SAMPLE ESTIMATORS
title_short Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimates
title_full Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimates
title_fullStr Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimates
title_full_unstemmed Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimates
title_sort Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimates
dc.creator.none.fl_str_mv Da Silva, Fagner M.
Miño, Carolina Isabel
Izbicki, Rafael
Del Lama, Sílvia Nassif
author Da Silva, Fagner M.
author_facet Da Silva, Fagner M.
Miño, Carolina Isabel
Izbicki, Rafael
Del Lama, Sílvia Nassif
author_role author
author2 Miño, Carolina Isabel
Izbicki, Rafael
Del Lama, Sílvia Nassif
author2_role author
author
author
dc.subject.none.fl_str_mv CONSERVATION GENETICS
EFFECTIVE SIZE
MICROSATELLITES
MYCTERIA AMERICANA
SIMULATIONS
SINGLE-SAMPLE ESTIMATORS
topic CONSERVATION GENETICS
EFFECTIVE SIZE
MICROSATELLITES
MYCTERIA AMERICANA
SIMULATIONS
SINGLE-SAMPLE ESTIMATORS
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Detecting trends in population size fluctuations is a major focus in ecology, evolution,and conservation biology. Populations of colonial waterbirds have been monitoredusing demographic approaches to determine annual census size (Na). We propose theaddition of genetic estimates of the effective number of breeders (Nb) as indirectmeasures of the risk of loss of genetic diversity to improve the evaluation of demographics and increase the accuracy of trend estimates in breeding colonies. Here, weinvestigated which methods of the estimation of Nb are more precise under conditions of moderate genetic diversity, limited sample sizes and few microsatellite loci,as often occurs with natural populations. We used the wood stork as a model speciesand we offered a workflow that researchers can follow for monitoring bird breedingcolonies. Our approach started with simulations using five estimators of Nb and thetheoretical results were validated with empirical data collected from breeding colonies settled in the Brazilian Pantanal wetland. In parallel, we estimated census sizeusing a corrected method based on counting active nests. Both in simulations and innatural populations, the approximate Bayesian computation (ABC) and sibship assignment (SA) methods yielded more precise estimates than the linkage disequilibrium, heterozygosity excess, and molecular coancestry methods. In particular, theABC method performed best with few loci and small sample sizes, while the otherestimators required larger sample sizes and at least 13 loci to not underestimate Nb.Moreover, according to our Nb/Na estimates (values were often =0.1), the wood storkcolonies evaluated could be facing the loss of genetic diversity. We demonstrate thatthe combination of genetic and census estimates is a useful approach for monitoringnatural breeding bird populations. This methodology has been recommended forpopulations of rare species or with a known history of population decline to supportconservation efforts.
Fil: Da Silva, Fagner M.. Universidade Federal do São Carlos; Brasil
Fil: Miño, Carolina Isabel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú | Universidad Nacional de Misiones. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú; Argentina
Fil: Izbicki, Rafael. Universidade Federal do São Carlos; Brasil
Fil: Del Lama, Sílvia Nassif. Universidade Federal do São Carlos; Brasil
description Detecting trends in population size fluctuations is a major focus in ecology, evolution,and conservation biology. Populations of colonial waterbirds have been monitoredusing demographic approaches to determine annual census size (Na). We propose theaddition of genetic estimates of the effective number of breeders (Nb) as indirectmeasures of the risk of loss of genetic diversity to improve the evaluation of demographics and increase the accuracy of trend estimates in breeding colonies. Here, weinvestigated which methods of the estimation of Nb are more precise under conditions of moderate genetic diversity, limited sample sizes and few microsatellite loci,as often occurs with natural populations. We used the wood stork as a model speciesand we offered a workflow that researchers can follow for monitoring bird breedingcolonies. Our approach started with simulations using five estimators of Nb and thetheoretical results were validated with empirical data collected from breeding colonies settled in the Brazilian Pantanal wetland. In parallel, we estimated census sizeusing a corrected method based on counting active nests. Both in simulations and innatural populations, the approximate Bayesian computation (ABC) and sibship assignment (SA) methods yielded more precise estimates than the linkage disequilibrium, heterozygosity excess, and molecular coancestry methods. In particular, theABC method performed best with few loci and small sample sizes, while the otherestimators required larger sample sizes and at least 13 loci to not underestimate Nb.Moreover, according to our Nb/Na estimates (values were often =0.1), the wood storkcolonies evaluated could be facing the loss of genetic diversity. We demonstrate thatthe combination of genetic and census estimates is a useful approach for monitoringnatural breeding bird populations. This methodology has been recommended forpopulations of rare species or with a known history of population decline to supportconservation efforts.
publishDate 2018
dc.date.none.fl_str_mv 2018-06
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/82160
Da Silva, Fagner M.; Miño, Carolina Isabel; Izbicki, Rafael; Del Lama, Sílvia Nassif; Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimates; Wiley; Ecology and Evolution; 8; 16; 6-2018; 8088-8101
2045-7758
2045-7758
CONICET Digital
CONICET
url http://hdl.handle.net/11336/82160
identifier_str_mv Da Silva, Fagner M.; Miño, Carolina Isabel; Izbicki, Rafael; Del Lama, Sílvia Nassif; Considerations for monitoring population trends of colonial waterbirds using the effective number of breeders and census estimates; Wiley; Ecology and Evolution; 8; 16; 6-2018; 8088-8101
2045-7758
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/abs/10.1002/ece3.4347
info:eu-repo/semantics/altIdentifier/doi/10.1002/ece3.4347
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-nd/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-nd/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/zip
application/pdf
dc.publisher.none.fl_str_mv Wiley
publisher.none.fl_str_mv Wiley
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
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instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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