Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans
- Autores
- Simonetta, Sergio Hernan
- Año de publicación
- 2010
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- In toxicity and pharmacological studies C. elegans are exposed to different compounds and the effects analyzed by observing worm viability or behavior. An alternative approach is to use locomotor activity as a readout, which has been instrumental for assessing compound toxicity (Dhawan et al., 2000). Data acquisition usually requires microscope observation and manual counting, which is time consuming and inconvenient for extensive compound screenings. We have previously developed an automated method to detect C. elegans movement in which swimming worms are detected as they cross through infrared microbeams (Simonetta et al., 2007). We are currently adapting this methodology for high throughput analyses. We have developed a 384 channel apparatus and successfully recorded the behavioral changes produced by toxic compounds (Figure 1). The effect increases with compound concentration and is dependent on exposure time. Our "Worm Microtracker" might be useful for the community to develop easier and faster toxicity and paralysis assays, opening the possibility of performing high throughput studies in C. elegans.
Fil: Simonetta, Sergio Hernan. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Bioquimicas de Buenos Aires; Argentina. Fundación Instituto Leloir; Argentina - Materia
-
farmacologia
caenorhabditis elegans - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/14466
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Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegansSimonetta, Sergio Hernanfarmacologiacaenorhabditis eleganshttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1In toxicity and pharmacological studies C. elegans are exposed to different compounds and the effects analyzed by observing worm viability or behavior. An alternative approach is to use locomotor activity as a readout, which has been instrumental for assessing compound toxicity (Dhawan et al., 2000). Data acquisition usually requires microscope observation and manual counting, which is time consuming and inconvenient for extensive compound screenings. We have previously developed an automated method to detect C. elegans movement in which swimming worms are detected as they cross through infrared microbeams (Simonetta et al., 2007). We are currently adapting this methodology for high throughput analyses. We have developed a 384 channel apparatus and successfully recorded the behavioral changes produced by toxic compounds (Figure 1). The effect increases with compound concentration and is dependent on exposure time. Our "Worm Microtracker" might be useful for the community to develop easier and faster toxicity and paralysis assays, opening the possibility of performing high throughput studies in C. elegans.Fil: Simonetta, Sergio Hernan. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Bioquimicas de Buenos Aires; Argentina. Fundación Instituto Leloir; ArgentinaWormbook2010-06info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/14466Simonetta, Sergio Hernan; Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans; Wormbook; The Worm Breeder’s Gazette; 18; 2; 6-2010; 101551-8507enginfo:eu-repo/semantics/altIdentifier/url/http://www.wormbook.org/wbg/articles/volume-18-number-2/towards-an-automatic-method-for-toxicity-and-pharmacological-testing-in-c-elegans/info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-15T14:20:26Zoai:ri.conicet.gov.ar:11336/14466instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-15 14:20:27.124CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans |
title |
Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans |
spellingShingle |
Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans Simonetta, Sergio Hernan farmacologia caenorhabditis elegans |
title_short |
Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans |
title_full |
Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans |
title_fullStr |
Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans |
title_full_unstemmed |
Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans |
title_sort |
Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans |
dc.creator.none.fl_str_mv |
Simonetta, Sergio Hernan |
author |
Simonetta, Sergio Hernan |
author_facet |
Simonetta, Sergio Hernan |
author_role |
author |
dc.subject.none.fl_str_mv |
farmacologia caenorhabditis elegans |
topic |
farmacologia caenorhabditis elegans |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
In toxicity and pharmacological studies C. elegans are exposed to different compounds and the effects analyzed by observing worm viability or behavior. An alternative approach is to use locomotor activity as a readout, which has been instrumental for assessing compound toxicity (Dhawan et al., 2000). Data acquisition usually requires microscope observation and manual counting, which is time consuming and inconvenient for extensive compound screenings. We have previously developed an automated method to detect C. elegans movement in which swimming worms are detected as they cross through infrared microbeams (Simonetta et al., 2007). We are currently adapting this methodology for high throughput analyses. We have developed a 384 channel apparatus and successfully recorded the behavioral changes produced by toxic compounds (Figure 1). The effect increases with compound concentration and is dependent on exposure time. Our "Worm Microtracker" might be useful for the community to develop easier and faster toxicity and paralysis assays, opening the possibility of performing high throughput studies in C. elegans. Fil: Simonetta, Sergio Hernan. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Bioquimicas de Buenos Aires; Argentina. Fundación Instituto Leloir; Argentina |
description |
In toxicity and pharmacological studies C. elegans are exposed to different compounds and the effects analyzed by observing worm viability or behavior. An alternative approach is to use locomotor activity as a readout, which has been instrumental for assessing compound toxicity (Dhawan et al., 2000). Data acquisition usually requires microscope observation and manual counting, which is time consuming and inconvenient for extensive compound screenings. We have previously developed an automated method to detect C. elegans movement in which swimming worms are detected as they cross through infrared microbeams (Simonetta et al., 2007). We are currently adapting this methodology for high throughput analyses. We have developed a 384 channel apparatus and successfully recorded the behavioral changes produced by toxic compounds (Figure 1). The effect increases with compound concentration and is dependent on exposure time. Our "Worm Microtracker" might be useful for the community to develop easier and faster toxicity and paralysis assays, opening the possibility of performing high throughput studies in C. elegans. |
publishDate |
2010 |
dc.date.none.fl_str_mv |
2010-06 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/14466 Simonetta, Sergio Hernan; Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans; Wormbook; The Worm Breeder’s Gazette; 18; 2; 6-2010; 10 1551-8507 |
url |
http://hdl.handle.net/11336/14466 |
identifier_str_mv |
Simonetta, Sergio Hernan; Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans; Wormbook; The Worm Breeder’s Gazette; 18; 2; 6-2010; 10 1551-8507 |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/url/http://www.wormbook.org/wbg/articles/volume-18-number-2/towards-an-automatic-method-for-toxicity-and-pharmacological-testing-in-c-elegans/ |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
Wormbook |
publisher.none.fl_str_mv |
Wormbook |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
reponame_str |
CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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1846082579767230464 |
score |
13.22299 |