Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans

Autores
Simonetta, Sergio Hernan
Año de publicación
2010
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
In toxicity and pharmacological studies C. elegans are exposed to different compounds and the effects analyzed by observing worm viability or behavior. An alternative approach is to use locomotor activity as a readout, which has been instrumental for assessing compound toxicity (Dhawan et al., 2000). Data acquisition usually requires microscope observation and manual counting, which is time consuming and inconvenient for extensive compound screenings. We have previously developed an automated method to detect C. elegans movement in which swimming worms are detected as they cross through infrared microbeams (Simonetta et al., 2007). We are currently adapting this methodology for high throughput analyses. We have developed a 384 channel apparatus and successfully recorded the behavioral changes produced by toxic compounds (Figure 1). The effect increases with compound concentration and is dependent on exposure time. Our "Worm Microtracker" might be useful for the community to develop easier and faster toxicity and paralysis assays, opening the possibility of performing high throughput studies in C. elegans.
Fil: Simonetta, Sergio Hernan. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Bioquimicas de Buenos Aires; Argentina. Fundación Instituto Leloir; Argentina
Materia
farmacologia
caenorhabditis elegans
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/14466

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network_name_str CONICET Digital (CONICET)
spelling Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegansSimonetta, Sergio Hernanfarmacologiacaenorhabditis eleganshttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1In toxicity and pharmacological studies C. elegans are exposed to different compounds and the effects analyzed by observing worm viability or behavior. An alternative approach is to use locomotor activity as a readout, which has been instrumental for assessing compound toxicity (Dhawan et al., 2000). Data acquisition usually requires microscope observation and manual counting, which is time consuming and inconvenient for extensive compound screenings. We have previously developed an automated method to detect C. elegans movement in which swimming worms are detected as they cross through infrared microbeams (Simonetta et al., 2007). We are currently adapting this methodology for high throughput analyses. We have developed a 384 channel apparatus and successfully recorded the behavioral changes produced by toxic compounds (Figure 1). The effect increases with compound concentration and is dependent on exposure time. Our "Worm Microtracker" might be useful for the community to develop easier and faster toxicity and paralysis assays, opening the possibility of performing high throughput studies in C. elegans.Fil: Simonetta, Sergio Hernan. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Bioquimicas de Buenos Aires; Argentina. Fundación Instituto Leloir; ArgentinaWormbook2010-06info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/14466Simonetta, Sergio Hernan; Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans; Wormbook; The Worm Breeder’s Gazette; 18; 2; 6-2010; 101551-8507enginfo:eu-repo/semantics/altIdentifier/url/http://www.wormbook.org/wbg/articles/volume-18-number-2/towards-an-automatic-method-for-toxicity-and-pharmacological-testing-in-c-elegans/info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-15T14:20:26Zoai:ri.conicet.gov.ar:11336/14466instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-15 14:20:27.124CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans
title Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans
spellingShingle Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans
Simonetta, Sergio Hernan
farmacologia
caenorhabditis elegans
title_short Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans
title_full Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans
title_fullStr Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans
title_full_unstemmed Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans
title_sort Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans
dc.creator.none.fl_str_mv Simonetta, Sergio Hernan
author Simonetta, Sergio Hernan
author_facet Simonetta, Sergio Hernan
author_role author
dc.subject.none.fl_str_mv farmacologia
caenorhabditis elegans
topic farmacologia
caenorhabditis elegans
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv In toxicity and pharmacological studies C. elegans are exposed to different compounds and the effects analyzed by observing worm viability or behavior. An alternative approach is to use locomotor activity as a readout, which has been instrumental for assessing compound toxicity (Dhawan et al., 2000). Data acquisition usually requires microscope observation and manual counting, which is time consuming and inconvenient for extensive compound screenings. We have previously developed an automated method to detect C. elegans movement in which swimming worms are detected as they cross through infrared microbeams (Simonetta et al., 2007). We are currently adapting this methodology for high throughput analyses. We have developed a 384 channel apparatus and successfully recorded the behavioral changes produced by toxic compounds (Figure 1). The effect increases with compound concentration and is dependent on exposure time. Our "Worm Microtracker" might be useful for the community to develop easier and faster toxicity and paralysis assays, opening the possibility of performing high throughput studies in C. elegans.
Fil: Simonetta, Sergio Hernan. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Investigaciones Bioquimicas de Buenos Aires; Argentina. Fundación Instituto Leloir; Argentina
description In toxicity and pharmacological studies C. elegans are exposed to different compounds and the effects analyzed by observing worm viability or behavior. An alternative approach is to use locomotor activity as a readout, which has been instrumental for assessing compound toxicity (Dhawan et al., 2000). Data acquisition usually requires microscope observation and manual counting, which is time consuming and inconvenient for extensive compound screenings. We have previously developed an automated method to detect C. elegans movement in which swimming worms are detected as they cross through infrared microbeams (Simonetta et al., 2007). We are currently adapting this methodology for high throughput analyses. We have developed a 384 channel apparatus and successfully recorded the behavioral changes produced by toxic compounds (Figure 1). The effect increases with compound concentration and is dependent on exposure time. Our "Worm Microtracker" might be useful for the community to develop easier and faster toxicity and paralysis assays, opening the possibility of performing high throughput studies in C. elegans.
publishDate 2010
dc.date.none.fl_str_mv 2010-06
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/14466
Simonetta, Sergio Hernan; Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans; Wormbook; The Worm Breeder’s Gazette; 18; 2; 6-2010; 10
1551-8507
url http://hdl.handle.net/11336/14466
identifier_str_mv Simonetta, Sergio Hernan; Towards an Automatic Method for Toxicity and Pharmacological Testing in C. elegans; Wormbook; The Worm Breeder’s Gazette; 18; 2; 6-2010; 10
1551-8507
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/http://www.wormbook.org/wbg/articles/volume-18-number-2/towards-an-automatic-method-for-toxicity-and-pharmacological-testing-in-c-elegans/
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Wormbook
publisher.none.fl_str_mv Wormbook
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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