TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20
- Autores
- Otrelo Cardoso, Ana Rita; Nair, Rashmi; Correia, Márcia; Rivas, Maria Gabriela; Santos Silva, Teresa
- Año de publicación
- 2014
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- The TupABC system is involved in the cellular uptake of tungsten and belongs to the ABC (ATP binding cassette)-type transporter systems. The TupA component is a periplasmic protein that binds tungstate anions, which are then transported through the membrane by the TupB component using ATP hydrolysis as the energy source (the reaction catalyzed by the ModC component). We report the heterologous expression, purification, determination of affinity binding constants and crystallization of the Desulfovibrio alaskensis G20 TupA. The tupA gene (locus tag Dde_0234) was cloned in the pET46 Enterokinase/Ligation-Independent Cloning (LIC) expression vector, and the construct was used to transform BL21 (DE3) cells. TupA expression and purification were optimized to a final yield of 10 mg of soluble pure protein per liter of culture medium. Native polyacrylamide gel electrophoresis was carried out showing that TupA binds both tungstate and molybdate ions and has no significant interaction with sulfate, phosphate or perchlorate. Quantitative analysis of metal binding by isothermal titration calorimetry was in agreement with these results, but in addition, shows that TupA has higher affinity to tungstate than molybdate. The protein crystallizes in the presence of 30% (w/v) polyethylene glycol 3350 using the hanging-drop vapor diffusion method. The crystals diffract X-rays beyond 1.4 Å resolution and belong to the P21 space group, with cell parameters a = 52.25 Å, b = 42.50 Å, c = 54.71 Å, β = 95.43°. A molecular replacement solution was found, and the structure is currently under refinement.
Fil: Otrelo Cardoso, Ana Rita. Centro de Química Fina E Biotecnologia; Portugal
Fil: Nair, Rashmi. Centro de Química Fina E Biotecnologia; Portugal
Fil: Correia, Márcia. Centro de Química Fina E Biotecnologia; Portugal
Fil: Rivas, Maria Gabriela. Centro de Química Fina E Biotecnologia; Portugal. Universidad Nacional del Litoral; Argentina
Fil: Santos Silva, Teresa. Centro de Química Fina E Biotecnologia; Portugal - Materia
-
TupA
tungstate
metal transport
Desulfovibrio
sulfate reducing bacteria
protein-ligand interaction
isothermal titration calorimetry
X-ray crystallography - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/92833
Ver los metadatos del registro completo
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CONICET Digital (CONICET) |
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TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20Otrelo Cardoso, Ana RitaNair, RashmiCorreia, MárciaRivas, Maria GabrielaSantos Silva, TeresaTupAtungstatemetal transportDesulfovibriosulfate reducing bacteriaprotein-ligand interactionisothermal titration calorimetryX-ray crystallographyhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1The TupABC system is involved in the cellular uptake of tungsten and belongs to the ABC (ATP binding cassette)-type transporter systems. The TupA component is a periplasmic protein that binds tungstate anions, which are then transported through the membrane by the TupB component using ATP hydrolysis as the energy source (the reaction catalyzed by the ModC component). We report the heterologous expression, purification, determination of affinity binding constants and crystallization of the Desulfovibrio alaskensis G20 TupA. The tupA gene (locus tag Dde_0234) was cloned in the pET46 Enterokinase/Ligation-Independent Cloning (LIC) expression vector, and the construct was used to transform BL21 (DE3) cells. TupA expression and purification were optimized to a final yield of 10 mg of soluble pure protein per liter of culture medium. Native polyacrylamide gel electrophoresis was carried out showing that TupA binds both tungstate and molybdate ions and has no significant interaction with sulfate, phosphate or perchlorate. Quantitative analysis of metal binding by isothermal titration calorimetry was in agreement with these results, but in addition, shows that TupA has higher affinity to tungstate than molybdate. The protein crystallizes in the presence of 30% (w/v) polyethylene glycol 3350 using the hanging-drop vapor diffusion method. The crystals diffract X-rays beyond 1.4 Å resolution and belong to the P21 space group, with cell parameters a = 52.25 Å, b = 42.50 Å, c = 54.71 Å, β = 95.43°. A molecular replacement solution was found, and the structure is currently under refinement.Fil: Otrelo Cardoso, Ana Rita. Centro de Química Fina E Biotecnologia; PortugalFil: Nair, Rashmi. Centro de Química Fina E Biotecnologia; PortugalFil: Correia, Márcia. Centro de Química Fina E Biotecnologia; PortugalFil: Rivas, Maria Gabriela. Centro de Química Fina E Biotecnologia; Portugal. Universidad Nacional del Litoral; ArgentinaFil: Santos Silva, Teresa. Centro de Química Fina E Biotecnologia; PortugalMDPI AG2014-07info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/92833Otrelo Cardoso, Ana Rita; Nair, Rashmi; Correia, Márcia; Rivas, Maria Gabriela; Santos Silva, Teresa; TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20; MDPI AG; International Journal of Molecular Sciences; 15; 7; 7-2014; 11783-117981422-0067CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.3390/ijms150711783info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T09:56:38Zoai:ri.conicet.gov.ar:11336/92833instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 09:56:38.523CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20 |
title |
TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20 |
spellingShingle |
TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20 Otrelo Cardoso, Ana Rita TupA tungstate metal transport Desulfovibrio sulfate reducing bacteria protein-ligand interaction isothermal titration calorimetry X-ray crystallography |
title_short |
TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20 |
title_full |
TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20 |
title_fullStr |
TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20 |
title_full_unstemmed |
TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20 |
title_sort |
TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20 |
dc.creator.none.fl_str_mv |
Otrelo Cardoso, Ana Rita Nair, Rashmi Correia, Márcia Rivas, Maria Gabriela Santos Silva, Teresa |
author |
Otrelo Cardoso, Ana Rita |
author_facet |
Otrelo Cardoso, Ana Rita Nair, Rashmi Correia, Márcia Rivas, Maria Gabriela Santos Silva, Teresa |
author_role |
author |
author2 |
Nair, Rashmi Correia, Márcia Rivas, Maria Gabriela Santos Silva, Teresa |
author2_role |
author author author author |
dc.subject.none.fl_str_mv |
TupA tungstate metal transport Desulfovibrio sulfate reducing bacteria protein-ligand interaction isothermal titration calorimetry X-ray crystallography |
topic |
TupA tungstate metal transport Desulfovibrio sulfate reducing bacteria protein-ligand interaction isothermal titration calorimetry X-ray crystallography |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
The TupABC system is involved in the cellular uptake of tungsten and belongs to the ABC (ATP binding cassette)-type transporter systems. The TupA component is a periplasmic protein that binds tungstate anions, which are then transported through the membrane by the TupB component using ATP hydrolysis as the energy source (the reaction catalyzed by the ModC component). We report the heterologous expression, purification, determination of affinity binding constants and crystallization of the Desulfovibrio alaskensis G20 TupA. The tupA gene (locus tag Dde_0234) was cloned in the pET46 Enterokinase/Ligation-Independent Cloning (LIC) expression vector, and the construct was used to transform BL21 (DE3) cells. TupA expression and purification were optimized to a final yield of 10 mg of soluble pure protein per liter of culture medium. Native polyacrylamide gel electrophoresis was carried out showing that TupA binds both tungstate and molybdate ions and has no significant interaction with sulfate, phosphate or perchlorate. Quantitative analysis of metal binding by isothermal titration calorimetry was in agreement with these results, but in addition, shows that TupA has higher affinity to tungstate than molybdate. The protein crystallizes in the presence of 30% (w/v) polyethylene glycol 3350 using the hanging-drop vapor diffusion method. The crystals diffract X-rays beyond 1.4 Å resolution and belong to the P21 space group, with cell parameters a = 52.25 Å, b = 42.50 Å, c = 54.71 Å, β = 95.43°. A molecular replacement solution was found, and the structure is currently under refinement. Fil: Otrelo Cardoso, Ana Rita. Centro de Química Fina E Biotecnologia; Portugal Fil: Nair, Rashmi. Centro de Química Fina E Biotecnologia; Portugal Fil: Correia, Márcia. Centro de Química Fina E Biotecnologia; Portugal Fil: Rivas, Maria Gabriela. Centro de Química Fina E Biotecnologia; Portugal. Universidad Nacional del Litoral; Argentina Fil: Santos Silva, Teresa. Centro de Química Fina E Biotecnologia; Portugal |
description |
The TupABC system is involved in the cellular uptake of tungsten and belongs to the ABC (ATP binding cassette)-type transporter systems. The TupA component is a periplasmic protein that binds tungstate anions, which are then transported through the membrane by the TupB component using ATP hydrolysis as the energy source (the reaction catalyzed by the ModC component). We report the heterologous expression, purification, determination of affinity binding constants and crystallization of the Desulfovibrio alaskensis G20 TupA. The tupA gene (locus tag Dde_0234) was cloned in the pET46 Enterokinase/Ligation-Independent Cloning (LIC) expression vector, and the construct was used to transform BL21 (DE3) cells. TupA expression and purification were optimized to a final yield of 10 mg of soluble pure protein per liter of culture medium. Native polyacrylamide gel electrophoresis was carried out showing that TupA binds both tungstate and molybdate ions and has no significant interaction with sulfate, phosphate or perchlorate. Quantitative analysis of metal binding by isothermal titration calorimetry was in agreement with these results, but in addition, shows that TupA has higher affinity to tungstate than molybdate. The protein crystallizes in the presence of 30% (w/v) polyethylene glycol 3350 using the hanging-drop vapor diffusion method. The crystals diffract X-rays beyond 1.4 Å resolution and belong to the P21 space group, with cell parameters a = 52.25 Å, b = 42.50 Å, c = 54.71 Å, β = 95.43°. A molecular replacement solution was found, and the structure is currently under refinement. |
publishDate |
2014 |
dc.date.none.fl_str_mv |
2014-07 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/92833 Otrelo Cardoso, Ana Rita; Nair, Rashmi; Correia, Márcia; Rivas, Maria Gabriela; Santos Silva, Teresa; TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20; MDPI AG; International Journal of Molecular Sciences; 15; 7; 7-2014; 11783-11798 1422-0067 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/92833 |
identifier_str_mv |
Otrelo Cardoso, Ana Rita; Nair, Rashmi; Correia, Márcia; Rivas, Maria Gabriela; Santos Silva, Teresa; TupA: A tungstate binding protein in the periplasm of Desulfovibrio alaskensis G20; MDPI AG; International Journal of Molecular Sciences; 15; 7; 7-2014; 11783-11798 1422-0067 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/doi/10.3390/ijms150711783 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
MDPI AG |
publisher.none.fl_str_mv |
MDPI AG |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
reponame_str |
CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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1842269414368477184 |
score |
13.13397 |