Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome

Autores
Paakinaho, Ville; Johnson, Thomas A.; Presman, Diego Martin; Hager, Gordon L.
Año de publicación
2019
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Most transcription factors, including nuclear receptors, are widely modeled as binding regulatory elements as monomers, homodimers, or heterodimers. Recent findings in live cells show that the glucocorticoid receptor NR3C1 (also known as GR) forms tetramers on enhancers, owing to an allosteric alteration induced by DNA binding, and suggest that higher oligomerization states are important for the gene regulatory responses of GR. By using a variant (GRtetra) that mimics this allosteric transition, we performed genome-wide studies using a GR knockout cell line with reintroduced wild-type GR or reintroduced GRtetra. GRtetra acts as a super receptor by binding to response elements not accessible to the wild-type receptor and both induces and represses more genes than GRwt. These results argue that DNA binding induces a structural transition to the tetrameric state, forming a transient higher-order structure that drives both the activating and repressive actions of glucocorticoids.
Fil: Paakinaho, Ville. National Institutes of Health; Estados Unidos. University Of Eastern Finland; Finlandia
Fil: Johnson, Thomas A.. National Institutes of Health; Estados Unidos
Fil: Presman, Diego Martin. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Fisiología, Biología Molecular y Neurociencias. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Fisiología, Biología Molecular y Neurociencias; Argentina
Fil: Hager, Gordon L.. National Institutes of Health; Estados Unidos
Materia
GLUCOCORTICOID RECEPTOR
DIMER
TETRAMER
CHROMATIN
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/121633

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spelling Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcomePaakinaho, VilleJohnson, Thomas A.Presman, Diego MartinHager, Gordon L.GLUCOCORTICOID RECEPTORDIMERTETRAMERCHROMATINhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Most transcription factors, including nuclear receptors, are widely modeled as binding regulatory elements as monomers, homodimers, or heterodimers. Recent findings in live cells show that the glucocorticoid receptor NR3C1 (also known as GR) forms tetramers on enhancers, owing to an allosteric alteration induced by DNA binding, and suggest that higher oligomerization states are important for the gene regulatory responses of GR. By using a variant (GRtetra) that mimics this allosteric transition, we performed genome-wide studies using a GR knockout cell line with reintroduced wild-type GR or reintroduced GRtetra. GRtetra acts as a super receptor by binding to response elements not accessible to the wild-type receptor and both induces and represses more genes than GRwt. These results argue that DNA binding induces a structural transition to the tetrameric state, forming a transient higher-order structure that drives both the activating and repressive actions of glucocorticoids.Fil: Paakinaho, Ville. National Institutes of Health; Estados Unidos. University Of Eastern Finland; FinlandiaFil: Johnson, Thomas A.. National Institutes of Health; Estados UnidosFil: Presman, Diego Martin. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Fisiología, Biología Molecular y Neurociencias. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Fisiología, Biología Molecular y Neurociencias; ArgentinaFil: Hager, Gordon L.. National Institutes of Health; Estados UnidosCold Spring Harbor Laboratory Press2019-08info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/121633Paakinaho, Ville; Johnson, Thomas A.; Presman, Diego Martin; Hager, Gordon L.; Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome; Cold Spring Harbor Laboratory Press; Genome Research; 29; 8; 8-2019; 1223-12341088-90511549-5469CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/http://genome.cshlp.org/lookup/doi/10.1101/gr.244814.118info:eu-repo/semantics/altIdentifier/doi/10.1101/gr.244814.118info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T10:06:06Zoai:ri.conicet.gov.ar:11336/121633instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 10:06:06.865CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome
title Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome
spellingShingle Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome
Paakinaho, Ville
GLUCOCORTICOID RECEPTOR
DIMER
TETRAMER
CHROMATIN
title_short Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome
title_full Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome
title_fullStr Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome
title_full_unstemmed Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome
title_sort Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome
dc.creator.none.fl_str_mv Paakinaho, Ville
Johnson, Thomas A.
Presman, Diego Martin
Hager, Gordon L.
author Paakinaho, Ville
author_facet Paakinaho, Ville
Johnson, Thomas A.
Presman, Diego Martin
Hager, Gordon L.
author_role author
author2 Johnson, Thomas A.
Presman, Diego Martin
Hager, Gordon L.
author2_role author
author
author
dc.subject.none.fl_str_mv GLUCOCORTICOID RECEPTOR
DIMER
TETRAMER
CHROMATIN
topic GLUCOCORTICOID RECEPTOR
DIMER
TETRAMER
CHROMATIN
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Most transcription factors, including nuclear receptors, are widely modeled as binding regulatory elements as monomers, homodimers, or heterodimers. Recent findings in live cells show that the glucocorticoid receptor NR3C1 (also known as GR) forms tetramers on enhancers, owing to an allosteric alteration induced by DNA binding, and suggest that higher oligomerization states are important for the gene regulatory responses of GR. By using a variant (GRtetra) that mimics this allosteric transition, we performed genome-wide studies using a GR knockout cell line with reintroduced wild-type GR or reintroduced GRtetra. GRtetra acts as a super receptor by binding to response elements not accessible to the wild-type receptor and both induces and represses more genes than GRwt. These results argue that DNA binding induces a structural transition to the tetrameric state, forming a transient higher-order structure that drives both the activating and repressive actions of glucocorticoids.
Fil: Paakinaho, Ville. National Institutes of Health; Estados Unidos. University Of Eastern Finland; Finlandia
Fil: Johnson, Thomas A.. National Institutes of Health; Estados Unidos
Fil: Presman, Diego Martin. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Fisiología, Biología Molecular y Neurociencias. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Fisiología, Biología Molecular y Neurociencias; Argentina
Fil: Hager, Gordon L.. National Institutes of Health; Estados Unidos
description Most transcription factors, including nuclear receptors, are widely modeled as binding regulatory elements as monomers, homodimers, or heterodimers. Recent findings in live cells show that the glucocorticoid receptor NR3C1 (also known as GR) forms tetramers on enhancers, owing to an allosteric alteration induced by DNA binding, and suggest that higher oligomerization states are important for the gene regulatory responses of GR. By using a variant (GRtetra) that mimics this allosteric transition, we performed genome-wide studies using a GR knockout cell line with reintroduced wild-type GR or reintroduced GRtetra. GRtetra acts as a super receptor by binding to response elements not accessible to the wild-type receptor and both induces and represses more genes than GRwt. These results argue that DNA binding induces a structural transition to the tetrameric state, forming a transient higher-order structure that drives both the activating and repressive actions of glucocorticoids.
publishDate 2019
dc.date.none.fl_str_mv 2019-08
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/121633
Paakinaho, Ville; Johnson, Thomas A.; Presman, Diego Martin; Hager, Gordon L.; Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome; Cold Spring Harbor Laboratory Press; Genome Research; 29; 8; 8-2019; 1223-1234
1088-9051
1549-5469
CONICET Digital
CONICET
url http://hdl.handle.net/11336/121633
identifier_str_mv Paakinaho, Ville; Johnson, Thomas A.; Presman, Diego Martin; Hager, Gordon L.; Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome; Cold Spring Harbor Laboratory Press; Genome Research; 29; 8; 8-2019; 1223-1234
1088-9051
1549-5469
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/http://genome.cshlp.org/lookup/doi/10.1101/gr.244814.118
info:eu-repo/semantics/altIdentifier/doi/10.1101/gr.244814.118
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Cold Spring Harbor Laboratory Press
publisher.none.fl_str_mv Cold Spring Harbor Laboratory Press
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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