Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]

Autores
Spooner, David M.; Peralta, Iris Edith; Knapp, Sandra
Año de publicación
2005
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Wild tomatoes (Solanum section Lycopersicon) are native to western South America. The delimitation and relationships of tomato species have differed widely depending upon whether morphological or biological species concepts are considered more important. Molecular data from mitochondrial, nuclear, and chloroplast DNA restriction fragment length polymorphisms (RFLPs), nuclear microsatellites, isozymes, and gene sequences of internal transcribed spacers of nuclear ribosomal DNA (ITS; multiple-copy), the single-copy nuclear encoded Granule-bound Starch Synthase gene (GBSSI or waxy), and morphology, have been used to examine hypotheses of species relationships. This study is a companion to the previous GBSSI gene sequence study and to the morphological study of relationships of all ten wild tomato species (including the recently described S. galapagense), with a concentration on the most widespread and variable species S. peruvianum s.l. These new AFLP data are largely concordant with the GBSSI and morphological data and in general support the species outlined in the latest treatment by C.M. Rick, but demonstrate the distinct nature of northern and southern Peruvian populations of S. peruvianum, and suggest that their taxonomy needs revision. Solanum ochranthum is supported as sister to wild tomatoes, and S. habrochaites and S. pennellii reside in a basal polytomy in the tomato clade.
Fil: Spooner, David M.. University of Wisconsin; Estados Unidos
Fil: Peralta, Iris Edith. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Provincia de Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Universidad Nacional de Cuyo. Instituto Argentino de Investigaciones de las Zonas Áridas; Argentina
Fil: Knapp, Sandra. The Natural History Museum; Reino Unido
Materia
AMPLIFIED FRAGMENT LENGTH POLYMORPHISM
AFLP
CONGRUENCE TEST
LYCOPERSICON
PHYLOGENY
SOLANACEAE
SOLANUM SECT. LYCOPERSICON
TOMATO
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/107625
Acceder
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oai_identifier_str oai:ri.conicet.gov.ar:11336/107625
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]Spooner, David M.Peralta, Iris EdithKnapp, SandraAMPLIFIED FRAGMENT LENGTH POLYMORPHISMAFLPCONGRUENCE TESTLYCOPERSICONPHYLOGENYSOLANACEAESOLANUM SECT. LYCOPERSICONTOMATOhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Wild tomatoes (Solanum section Lycopersicon) are native to western South America. The delimitation and relationships of tomato species have differed widely depending upon whether morphological or biological species concepts are considered more important. Molecular data from mitochondrial, nuclear, and chloroplast DNA restriction fragment length polymorphisms (RFLPs), nuclear microsatellites, isozymes, and gene sequences of internal transcribed spacers of nuclear ribosomal DNA (ITS; multiple-copy), the single-copy nuclear encoded Granule-bound Starch Synthase gene (GBSSI or waxy), and morphology, have been used to examine hypotheses of species relationships. This study is a companion to the previous GBSSI gene sequence study and to the morphological study of relationships of all ten wild tomato species (including the recently described S. galapagense), with a concentration on the most widespread and variable species S. peruvianum s.l. These new AFLP data are largely concordant with the GBSSI and morphological data and in general support the species outlined in the latest treatment by C.M. Rick, but demonstrate the distinct nature of northern and southern Peruvian populations of S. peruvianum, and suggest that their taxonomy needs revision. Solanum ochranthum is supported as sister to wild tomatoes, and S. habrochaites and S. pennellii reside in a basal polytomy in the tomato clade.Fil: Spooner, David M.. University of Wisconsin; Estados UnidosFil: Peralta, Iris Edith. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Provincia de Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Universidad Nacional de Cuyo. Instituto Argentino de Investigaciones de las Zonas Áridas; ArgentinaFil: Knapp, Sandra. The Natural History Museum; Reino UnidoInternational Association for Plant Taxonomy2005-02info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/107625Spooner, David M.; Peralta, Iris Edith; Knapp, Sandra; Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]; International Association for Plant Taxonomy; Taxon; 54; 1; 2-2005; 43-610040-0262CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/10.2307/25065301info:eu-repo/semantics/altIdentifier/doi/10.2307/25065301info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-10T13:19:42Zoai:ri.conicet.gov.ar:11336/107625instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-10 13:19:42.656CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]
title Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]
spellingShingle Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]
Spooner, David M.
AMPLIFIED FRAGMENT LENGTH POLYMORPHISM
AFLP
CONGRUENCE TEST
LYCOPERSICON
PHYLOGENY
SOLANACEAE
SOLANUM SECT. LYCOPERSICON
TOMATO
title_short Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]
title_full Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]
title_fullStr Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]
title_full_unstemmed Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]
title_sort Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]
dc.creator.none.fl_str_mv Spooner, David M.
Peralta, Iris Edith
Knapp, Sandra
author Spooner, David M.
author_facet Spooner, David M.
Peralta, Iris Edith
Knapp, Sandra
author_role author
author2 Peralta, Iris Edith
Knapp, Sandra
author2_role author
author
dc.subject.none.fl_str_mv AMPLIFIED FRAGMENT LENGTH POLYMORPHISM
AFLP
CONGRUENCE TEST
LYCOPERSICON
PHYLOGENY
SOLANACEAE
SOLANUM SECT. LYCOPERSICON
TOMATO
topic AMPLIFIED FRAGMENT LENGTH POLYMORPHISM
AFLP
CONGRUENCE TEST
LYCOPERSICON
PHYLOGENY
SOLANACEAE
SOLANUM SECT. LYCOPERSICON
TOMATO
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Wild tomatoes (Solanum section Lycopersicon) are native to western South America. The delimitation and relationships of tomato species have differed widely depending upon whether morphological or biological species concepts are considered more important. Molecular data from mitochondrial, nuclear, and chloroplast DNA restriction fragment length polymorphisms (RFLPs), nuclear microsatellites, isozymes, and gene sequences of internal transcribed spacers of nuclear ribosomal DNA (ITS; multiple-copy), the single-copy nuclear encoded Granule-bound Starch Synthase gene (GBSSI or waxy), and morphology, have been used to examine hypotheses of species relationships. This study is a companion to the previous GBSSI gene sequence study and to the morphological study of relationships of all ten wild tomato species (including the recently described S. galapagense), with a concentration on the most widespread and variable species S. peruvianum s.l. These new AFLP data are largely concordant with the GBSSI and morphological data and in general support the species outlined in the latest treatment by C.M. Rick, but demonstrate the distinct nature of northern and southern Peruvian populations of S. peruvianum, and suggest that their taxonomy needs revision. Solanum ochranthum is supported as sister to wild tomatoes, and S. habrochaites and S. pennellii reside in a basal polytomy in the tomato clade.
Fil: Spooner, David M.. University of Wisconsin; Estados Unidos
Fil: Peralta, Iris Edith. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Provincia de Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Universidad Nacional de Cuyo. Instituto Argentino de Investigaciones de las Zonas Áridas; Argentina
Fil: Knapp, Sandra. The Natural History Museum; Reino Unido
description Wild tomatoes (Solanum section Lycopersicon) are native to western South America. The delimitation and relationships of tomato species have differed widely depending upon whether morphological or biological species concepts are considered more important. Molecular data from mitochondrial, nuclear, and chloroplast DNA restriction fragment length polymorphisms (RFLPs), nuclear microsatellites, isozymes, and gene sequences of internal transcribed spacers of nuclear ribosomal DNA (ITS; multiple-copy), the single-copy nuclear encoded Granule-bound Starch Synthase gene (GBSSI or waxy), and morphology, have been used to examine hypotheses of species relationships. This study is a companion to the previous GBSSI gene sequence study and to the morphological study of relationships of all ten wild tomato species (including the recently described S. galapagense), with a concentration on the most widespread and variable species S. peruvianum s.l. These new AFLP data are largely concordant with the GBSSI and morphological data and in general support the species outlined in the latest treatment by C.M. Rick, but demonstrate the distinct nature of northern and southern Peruvian populations of S. peruvianum, and suggest that their taxonomy needs revision. Solanum ochranthum is supported as sister to wild tomatoes, and S. habrochaites and S. pennellii reside in a basal polytomy in the tomato clade.
publishDate 2005
dc.date.none.fl_str_mv 2005-02
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/107625
Spooner, David M.; Peralta, Iris Edith; Knapp, Sandra; Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]; International Association for Plant Taxonomy; Taxon; 54; 1; 2-2005; 43-61
0040-0262
CONICET Digital
CONICET
url http://hdl.handle.net/11336/107625
identifier_str_mv Spooner, David M.; Peralta, Iris Edith; Knapp, Sandra; Comparison of AFLPs with other markers for phylogenetic inference in wild tomatoes [ Solanum L. section Lycopersicon (Mill.) Wettst.]; International Association for Plant Taxonomy; Taxon; 54; 1; 2-2005; 43-61
0040-0262
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/10.2307/25065301
info:eu-repo/semantics/altIdentifier/doi/10.2307/25065301
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv International Association for Plant Taxonomy
publisher.none.fl_str_mv International Association for Plant Taxonomy
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 12.48226

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