Signaling properties of a covalent modification cycle are altered by a downstream target

Autores
Ventura, Alejandra; Jiang, Peng; Van Wassenhove, Lauren; Del Vecchio, Domitilla; Merajver, Sofia D.; Ninfa, Alexander J.
Año de publicación
2010
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
We used a model system of purified components to explore the effects of a downstream target on the signaling properties of a covalent modification cycle, an example of retroactivity. In the experimental system used, a bifunctional enzyme catalyzed the modification and demodification of its substrate protein, with both activities regulated by a small molecule stimulus. Here we examined how a downstream target for one or both forms of the substrate of the covalent modification cycle affected the steady-state output of the system, the sensitivity of the response to the stimulus, and the concentration of the stimulus required to provide the half-maximal response (S50). When both the modified and unmodified forms of the substrate protein were sequestered by the downstream target, the sensitivity of the response was dramatically decreased, but the S50 was only modestly affected. Conversely, when the downstream target only sequestered the unmodified form of the substrate protein, significant effects were observed on both system sensitivity and S 50. Behaviors of the experimental systems were well approximated both by simple models allowing analytical solutions and by a detailed model based on the known interactions and enzymatic activities. Modeling and experimentation indicated that retroactivity may result in subsensitive responses, even if the covalent modification cycle displays significant ultrasensitivity in the absence of retroactivity. Thus, we provide examples of how a downstream target can alter the signaling properties of an upstream signal transduction covalent modification cycle.
Fil: Ventura, Alejandra. University of Michigan; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Fisiología, Biología Molecular y Neurociencias. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Fisiología, Biología Molecular y Neurociencias; Argentina
Fil: Jiang, Peng. University of Michigan; Estados Unidos
Fil: Van Wassenhove, Lauren. University of Michigan; Estados Unidos
Fil: Del Vecchio, Domitilla. University of Michigan; Estados Unidos
Fil: Merajver, Sofia D.. University of Michigan; Estados Unidos
Fil: Ninfa, Alexander J.. University of Michigan; Estados Unidos
Materia
REGULATORY NETWORKS
RETROACTIVITY
SENSITIVITY
SIGNAL TRANSDUCTION
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/99643

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spelling Signaling properties of a covalent modification cycle are altered by a downstream targetVentura, AlejandraJiang, PengVan Wassenhove, LaurenDel Vecchio, DomitillaMerajver, Sofia D.Ninfa, Alexander J.REGULATORY NETWORKSRETROACTIVITYSENSITIVITYSIGNAL TRANSDUCTIONhttps://purl.org/becyt/ford/1.3https://purl.org/becyt/ford/1We used a model system of purified components to explore the effects of a downstream target on the signaling properties of a covalent modification cycle, an example of retroactivity. In the experimental system used, a bifunctional enzyme catalyzed the modification and demodification of its substrate protein, with both activities regulated by a small molecule stimulus. Here we examined how a downstream target for one or both forms of the substrate of the covalent modification cycle affected the steady-state output of the system, the sensitivity of the response to the stimulus, and the concentration of the stimulus required to provide the half-maximal response (S50). When both the modified and unmodified forms of the substrate protein were sequestered by the downstream target, the sensitivity of the response was dramatically decreased, but the S50 was only modestly affected. Conversely, when the downstream target only sequestered the unmodified form of the substrate protein, significant effects were observed on both system sensitivity and S 50. Behaviors of the experimental systems were well approximated both by simple models allowing analytical solutions and by a detailed model based on the known interactions and enzymatic activities. Modeling and experimentation indicated that retroactivity may result in subsensitive responses, even if the covalent modification cycle displays significant ultrasensitivity in the absence of retroactivity. Thus, we provide examples of how a downstream target can alter the signaling properties of an upstream signal transduction covalent modification cycle.Fil: Ventura, Alejandra. University of Michigan; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Fisiología, Biología Molecular y Neurociencias. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Fisiología, Biología Molecular y Neurociencias; ArgentinaFil: Jiang, Peng. University of Michigan; Estados UnidosFil: Van Wassenhove, Lauren. University of Michigan; Estados UnidosFil: Del Vecchio, Domitilla. University of Michigan; Estados UnidosFil: Merajver, Sofia D.. University of Michigan; Estados UnidosFil: Ninfa, Alexander J.. University of Michigan; Estados UnidosNational Academy of Sciences2010-06info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/99643Ventura, Alejandra; Jiang, Peng; Van Wassenhove, Lauren; Del Vecchio, Domitilla; Merajver, Sofia D.; et al.; Signaling properties of a covalent modification cycle are altered by a downstream target; National Academy of Sciences; Proceedings of the National Academy of Sciences of The United States of America; 107; 22; 6-2010; 10032-100370027-8424CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/http://www.pnas.org/content/107/22/10032.longinfo:eu-repo/semantics/altIdentifier/url/https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2890436/info:eu-repo/semantics/altIdentifier/doi/10.1073/pnas.0913815107info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-10T13:02:20Zoai:ri.conicet.gov.ar:11336/99643instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-10 13:02:20.278CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Signaling properties of a covalent modification cycle are altered by a downstream target
title Signaling properties of a covalent modification cycle are altered by a downstream target
spellingShingle Signaling properties of a covalent modification cycle are altered by a downstream target
Ventura, Alejandra
REGULATORY NETWORKS
RETROACTIVITY
SENSITIVITY
SIGNAL TRANSDUCTION
title_short Signaling properties of a covalent modification cycle are altered by a downstream target
title_full Signaling properties of a covalent modification cycle are altered by a downstream target
title_fullStr Signaling properties of a covalent modification cycle are altered by a downstream target
title_full_unstemmed Signaling properties of a covalent modification cycle are altered by a downstream target
title_sort Signaling properties of a covalent modification cycle are altered by a downstream target
dc.creator.none.fl_str_mv Ventura, Alejandra
Jiang, Peng
Van Wassenhove, Lauren
Del Vecchio, Domitilla
Merajver, Sofia D.
Ninfa, Alexander J.
author Ventura, Alejandra
author_facet Ventura, Alejandra
Jiang, Peng
Van Wassenhove, Lauren
Del Vecchio, Domitilla
Merajver, Sofia D.
Ninfa, Alexander J.
author_role author
author2 Jiang, Peng
Van Wassenhove, Lauren
Del Vecchio, Domitilla
Merajver, Sofia D.
Ninfa, Alexander J.
author2_role author
author
author
author
author
dc.subject.none.fl_str_mv REGULATORY NETWORKS
RETROACTIVITY
SENSITIVITY
SIGNAL TRANSDUCTION
topic REGULATORY NETWORKS
RETROACTIVITY
SENSITIVITY
SIGNAL TRANSDUCTION
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.3
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv We used a model system of purified components to explore the effects of a downstream target on the signaling properties of a covalent modification cycle, an example of retroactivity. In the experimental system used, a bifunctional enzyme catalyzed the modification and demodification of its substrate protein, with both activities regulated by a small molecule stimulus. Here we examined how a downstream target for one or both forms of the substrate of the covalent modification cycle affected the steady-state output of the system, the sensitivity of the response to the stimulus, and the concentration of the stimulus required to provide the half-maximal response (S50). When both the modified and unmodified forms of the substrate protein were sequestered by the downstream target, the sensitivity of the response was dramatically decreased, but the S50 was only modestly affected. Conversely, when the downstream target only sequestered the unmodified form of the substrate protein, significant effects were observed on both system sensitivity and S 50. Behaviors of the experimental systems were well approximated both by simple models allowing analytical solutions and by a detailed model based on the known interactions and enzymatic activities. Modeling and experimentation indicated that retroactivity may result in subsensitive responses, even if the covalent modification cycle displays significant ultrasensitivity in the absence of retroactivity. Thus, we provide examples of how a downstream target can alter the signaling properties of an upstream signal transduction covalent modification cycle.
Fil: Ventura, Alejandra. University of Michigan; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Fisiología, Biología Molecular y Neurociencias. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Fisiología, Biología Molecular y Neurociencias; Argentina
Fil: Jiang, Peng. University of Michigan; Estados Unidos
Fil: Van Wassenhove, Lauren. University of Michigan; Estados Unidos
Fil: Del Vecchio, Domitilla. University of Michigan; Estados Unidos
Fil: Merajver, Sofia D.. University of Michigan; Estados Unidos
Fil: Ninfa, Alexander J.. University of Michigan; Estados Unidos
description We used a model system of purified components to explore the effects of a downstream target on the signaling properties of a covalent modification cycle, an example of retroactivity. In the experimental system used, a bifunctional enzyme catalyzed the modification and demodification of its substrate protein, with both activities regulated by a small molecule stimulus. Here we examined how a downstream target for one or both forms of the substrate of the covalent modification cycle affected the steady-state output of the system, the sensitivity of the response to the stimulus, and the concentration of the stimulus required to provide the half-maximal response (S50). When both the modified and unmodified forms of the substrate protein were sequestered by the downstream target, the sensitivity of the response was dramatically decreased, but the S50 was only modestly affected. Conversely, when the downstream target only sequestered the unmodified form of the substrate protein, significant effects were observed on both system sensitivity and S 50. Behaviors of the experimental systems were well approximated both by simple models allowing analytical solutions and by a detailed model based on the known interactions and enzymatic activities. Modeling and experimentation indicated that retroactivity may result in subsensitive responses, even if the covalent modification cycle displays significant ultrasensitivity in the absence of retroactivity. Thus, we provide examples of how a downstream target can alter the signaling properties of an upstream signal transduction covalent modification cycle.
publishDate 2010
dc.date.none.fl_str_mv 2010-06
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/99643
Ventura, Alejandra; Jiang, Peng; Van Wassenhove, Lauren; Del Vecchio, Domitilla; Merajver, Sofia D.; et al.; Signaling properties of a covalent modification cycle are altered by a downstream target; National Academy of Sciences; Proceedings of the National Academy of Sciences of The United States of America; 107; 22; 6-2010; 10032-10037
0027-8424
CONICET Digital
CONICET
url http://hdl.handle.net/11336/99643
identifier_str_mv Ventura, Alejandra; Jiang, Peng; Van Wassenhove, Lauren; Del Vecchio, Domitilla; Merajver, Sofia D.; et al.; Signaling properties of a covalent modification cycle are altered by a downstream target; National Academy of Sciences; Proceedings of the National Academy of Sciences of The United States of America; 107; 22; 6-2010; 10032-10037
0027-8424
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/http://www.pnas.org/content/107/22/10032.long
info:eu-repo/semantics/altIdentifier/url/https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2890436/
info:eu-repo/semantics/altIdentifier/doi/10.1073/pnas.0913815107
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv National Academy of Sciences
publisher.none.fl_str_mv National Academy of Sciences
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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