Spectral signatures of canthaxanthin translocation in the orange carotenoid protein

Autores
Pigni, Natalia Belen; Clark, Kevin L.; Beck, Warren F.; Gascón, José A.
Año de publicación
2020
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
The orange carotenoid protein (OCP) is involved in the photoprotective processes in cyanobacteria via nonphotochemical quenching. Triggered by blue-green light absorption, the carotenoid chromophore undergoes translocation, displacing around 12 Å from the C-terminal domain (CTD) to the N-terminal domain (NTD). The detailed molecular rearrangements that occur within the carotenoid and the protein during this process remain largely elusive. By using a combination of molecular dynamics, well-tempered metadynamics, and hybrid quantum mechanical/molecular mechanical (QM/MM) calculations, we were able to mimic the translocation of the carotenoid from the inactive OCPO and obtain metastable red-shifted states in the photoactivation mechanism, replicating the λmax values of reference experimental spectra. In addition, our simulations give insight into the structure of the red-shifted form of the inactive state of OCP.
Fil: Pigni, Natalia Belen. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Ciencia y Tecnología de Alimentos Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Ciencia y Tecnología de Alimentos Córdoba; Argentina. University of Connecticut; Estados Unidos
Fil: Clark, Kevin L.. University of Connecticut; Estados Unidos
Fil: Beck, Warren F.. Michigan State University; Estados Unidos
Fil: Gascón, José A.. University of Connecticut; Estados Unidos
Materia
OCP
CANTHAXANTHIN
QM/MM
METADYNAMICS
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-nd/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/144623

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network_name_str CONICET Digital (CONICET)
spelling Spectral signatures of canthaxanthin translocation in the orange carotenoid proteinPigni, Natalia BelenClark, Kevin L.Beck, Warren F.Gascón, José A.OCPCANTHAXANTHINQM/MMMETADYNAMICShttps://purl.org/becyt/ford/1.4https://purl.org/becyt/ford/1https://purl.org/becyt/ford/1.3https://purl.org/becyt/ford/1https://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1The orange carotenoid protein (OCP) is involved in the photoprotective processes in cyanobacteria via nonphotochemical quenching. Triggered by blue-green light absorption, the carotenoid chromophore undergoes translocation, displacing around 12 Å from the C-terminal domain (CTD) to the N-terminal domain (NTD). The detailed molecular rearrangements that occur within the carotenoid and the protein during this process remain largely elusive. By using a combination of molecular dynamics, well-tempered metadynamics, and hybrid quantum mechanical/molecular mechanical (QM/MM) calculations, we were able to mimic the translocation of the carotenoid from the inactive OCPO and obtain metastable red-shifted states in the photoactivation mechanism, replicating the λmax values of reference experimental spectra. In addition, our simulations give insight into the structure of the red-shifted form of the inactive state of OCP.Fil: Pigni, Natalia Belen. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Ciencia y Tecnología de Alimentos Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Ciencia y Tecnología de Alimentos Córdoba; Argentina. University of Connecticut; Estados UnidosFil: Clark, Kevin L.. University of Connecticut; Estados UnidosFil: Beck, Warren F.. Michigan State University; Estados UnidosFil: Gascón, José A.. University of Connecticut; Estados UnidosAmerican Chemical Society2020-12info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/144623Pigni, Natalia Belen; Clark, Kevin L.; Beck, Warren F.; Gascón, José A.; Spectral signatures of canthaxanthin translocation in the orange carotenoid protein; American Chemical Society; Journal of Physical Chemistry B; 124; 50; 12-2020; 11387-113951520-61061520-5207CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1021/acs.jpcb.0c08756info:eu-repo/semantics/altIdentifier/url/https://pubs.acs.org/doi/10.1021/acs.jpcb.0c08756info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-nd/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:25:23Zoai:ri.conicet.gov.ar:11336/144623instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:25:24.015CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Spectral signatures of canthaxanthin translocation in the orange carotenoid protein
title Spectral signatures of canthaxanthin translocation in the orange carotenoid protein
spellingShingle Spectral signatures of canthaxanthin translocation in the orange carotenoid protein
Pigni, Natalia Belen
OCP
CANTHAXANTHIN
QM/MM
METADYNAMICS
title_short Spectral signatures of canthaxanthin translocation in the orange carotenoid protein
title_full Spectral signatures of canthaxanthin translocation in the orange carotenoid protein
title_fullStr Spectral signatures of canthaxanthin translocation in the orange carotenoid protein
title_full_unstemmed Spectral signatures of canthaxanthin translocation in the orange carotenoid protein
title_sort Spectral signatures of canthaxanthin translocation in the orange carotenoid protein
dc.creator.none.fl_str_mv Pigni, Natalia Belen
Clark, Kevin L.
Beck, Warren F.
Gascón, José A.
author Pigni, Natalia Belen
author_facet Pigni, Natalia Belen
Clark, Kevin L.
Beck, Warren F.
Gascón, José A.
author_role author
author2 Clark, Kevin L.
Beck, Warren F.
Gascón, José A.
author2_role author
author
author
dc.subject.none.fl_str_mv OCP
CANTHAXANTHIN
QM/MM
METADYNAMICS
topic OCP
CANTHAXANTHIN
QM/MM
METADYNAMICS
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.4
https://purl.org/becyt/ford/1
https://purl.org/becyt/ford/1.3
https://purl.org/becyt/ford/1
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv The orange carotenoid protein (OCP) is involved in the photoprotective processes in cyanobacteria via nonphotochemical quenching. Triggered by blue-green light absorption, the carotenoid chromophore undergoes translocation, displacing around 12 Å from the C-terminal domain (CTD) to the N-terminal domain (NTD). The detailed molecular rearrangements that occur within the carotenoid and the protein during this process remain largely elusive. By using a combination of molecular dynamics, well-tempered metadynamics, and hybrid quantum mechanical/molecular mechanical (QM/MM) calculations, we were able to mimic the translocation of the carotenoid from the inactive OCPO and obtain metastable red-shifted states in the photoactivation mechanism, replicating the λmax values of reference experimental spectra. In addition, our simulations give insight into the structure of the red-shifted form of the inactive state of OCP.
Fil: Pigni, Natalia Belen. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Ciencia y Tecnología de Alimentos Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Ciencia y Tecnología de Alimentos Córdoba; Argentina. University of Connecticut; Estados Unidos
Fil: Clark, Kevin L.. University of Connecticut; Estados Unidos
Fil: Beck, Warren F.. Michigan State University; Estados Unidos
Fil: Gascón, José A.. University of Connecticut; Estados Unidos
description The orange carotenoid protein (OCP) is involved in the photoprotective processes in cyanobacteria via nonphotochemical quenching. Triggered by blue-green light absorption, the carotenoid chromophore undergoes translocation, displacing around 12 Å from the C-terminal domain (CTD) to the N-terminal domain (NTD). The detailed molecular rearrangements that occur within the carotenoid and the protein during this process remain largely elusive. By using a combination of molecular dynamics, well-tempered metadynamics, and hybrid quantum mechanical/molecular mechanical (QM/MM) calculations, we were able to mimic the translocation of the carotenoid from the inactive OCPO and obtain metastable red-shifted states in the photoactivation mechanism, replicating the λmax values of reference experimental spectra. In addition, our simulations give insight into the structure of the red-shifted form of the inactive state of OCP.
publishDate 2020
dc.date.none.fl_str_mv 2020-12
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/144623
Pigni, Natalia Belen; Clark, Kevin L.; Beck, Warren F.; Gascón, José A.; Spectral signatures of canthaxanthin translocation in the orange carotenoid protein; American Chemical Society; Journal of Physical Chemistry B; 124; 50; 12-2020; 11387-11395
1520-6106
1520-5207
CONICET Digital
CONICET
url http://hdl.handle.net/11336/144623
identifier_str_mv Pigni, Natalia Belen; Clark, Kevin L.; Beck, Warren F.; Gascón, José A.; Spectral signatures of canthaxanthin translocation in the orange carotenoid protein; American Chemical Society; Journal of Physical Chemistry B; 124; 50; 12-2020; 11387-11395
1520-6106
1520-5207
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1021/acs.jpcb.0c08756
info:eu-repo/semantics/altIdentifier/url/https://pubs.acs.org/doi/10.1021/acs.jpcb.0c08756
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-nd/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-nd/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv American Chemical Society
publisher.none.fl_str_mv American Chemical Society
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.070432