Spectral features of canthaxanthin in hcp2. A qm/mm approach

Autores
Nixon, Kevin Clark; Pigni, Natalia Belen; Wijesiri, Kithmini; Gascón, José A.
Año de publicación
2021
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
The increased interest in sequencing cyanobacterial genomes has allowed the identifi-cation of new homologs to both the N-terminal domain (NTD) and C-terminal domain (CTD) of the Orange Carotenoid Protein (OCP). The N-terminal domain homologs are known as Helical Carotenoid Proteins (HCPs). Although some of these paralogs have been reported to act as singlet oxygen quenchers, their distinct functional roles remain unclear. One of these paralogs (HCP2) exclusively binds canthaxanthin (CAN) and its crystal structure has been recently characterized. Its absorption spectrum is significantly red-shifted, in comparison to the protein in solution, due to a dimerization where the two carotenoids are closely placed, favoring an electronic coupling interaction. Both the crystal and solution spectra are red-shifted by more than 50 nm when compared to canthaxanthin in solution. Using molecular dynamics (MD) and quantum mechanical/molecular mechanical (QM/MM) studies of HCP2, we aim to simulate these shifts as well as obtain insight into the environmental and coupling effects of carotenoid–protein interactions.
Fil: Nixon, Kevin Clark. University of Connecticut; Estados Unidos
Fil: Pigni, Natalia Belen. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Ciencia y Tecnología de Alimentos Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Ciencia y Tecnología de Alimentos Córdoba; Argentina. University of Connecticut; Estados Unidos
Fil: Wijesiri, Kithmini. University of Connecticut; Estados Unidos
Fil: Gascón, José A.. University of Connecticut; Estados Unidos
Materia
CANTHAXANTHIN
HCP2
QM/MM
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/184611

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network_name_str CONICET Digital (CONICET)
spelling Spectral features of canthaxanthin in hcp2. A qm/mm approachNixon, Kevin ClarkPigni, Natalia BelenWijesiri, KithminiGascón, José A.CANTHAXANTHINHCP2QM/MMhttps://purl.org/becyt/ford/1.4https://purl.org/becyt/ford/1The increased interest in sequencing cyanobacterial genomes has allowed the identifi-cation of new homologs to both the N-terminal domain (NTD) and C-terminal domain (CTD) of the Orange Carotenoid Protein (OCP). The N-terminal domain homologs are known as Helical Carotenoid Proteins (HCPs). Although some of these paralogs have been reported to act as singlet oxygen quenchers, their distinct functional roles remain unclear. One of these paralogs (HCP2) exclusively binds canthaxanthin (CAN) and its crystal structure has been recently characterized. Its absorption spectrum is significantly red-shifted, in comparison to the protein in solution, due to a dimerization where the two carotenoids are closely placed, favoring an electronic coupling interaction. Both the crystal and solution spectra are red-shifted by more than 50 nm when compared to canthaxanthin in solution. Using molecular dynamics (MD) and quantum mechanical/molecular mechanical (QM/MM) studies of HCP2, we aim to simulate these shifts as well as obtain insight into the environmental and coupling effects of carotenoid–protein interactions.Fil: Nixon, Kevin Clark. University of Connecticut; Estados UnidosFil: Pigni, Natalia Belen. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Ciencia y Tecnología de Alimentos Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Ciencia y Tecnología de Alimentos Córdoba; Argentina. University of Connecticut; Estados UnidosFil: Wijesiri, Kithmini. University of Connecticut; Estados UnidosFil: Gascón, José A.. University of Connecticut; Estados UnidosMolecular Diversity Preservation International2021-04-22info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/184611Nixon, Kevin Clark; Pigni, Natalia Belen; Wijesiri, Kithmini; Gascón, José A.; Spectral features of canthaxanthin in hcp2. A qm/mm approach; Molecular Diversity Preservation International; Molecules; 26; 9; 22-4-2021; 1-101420-3049CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://www.mdpi.com/1420-3049/26/9/2441info:eu-repo/semantics/altIdentifier/doi/10.3390/molecules26092441info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T10:11:34Zoai:ri.conicet.gov.ar:11336/184611instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 10:11:35.154CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Spectral features of canthaxanthin in hcp2. A qm/mm approach
title Spectral features of canthaxanthin in hcp2. A qm/mm approach
spellingShingle Spectral features of canthaxanthin in hcp2. A qm/mm approach
Nixon, Kevin Clark
CANTHAXANTHIN
HCP2
QM/MM
title_short Spectral features of canthaxanthin in hcp2. A qm/mm approach
title_full Spectral features of canthaxanthin in hcp2. A qm/mm approach
title_fullStr Spectral features of canthaxanthin in hcp2. A qm/mm approach
title_full_unstemmed Spectral features of canthaxanthin in hcp2. A qm/mm approach
title_sort Spectral features of canthaxanthin in hcp2. A qm/mm approach
dc.creator.none.fl_str_mv Nixon, Kevin Clark
Pigni, Natalia Belen
Wijesiri, Kithmini
Gascón, José A.
author Nixon, Kevin Clark
author_facet Nixon, Kevin Clark
Pigni, Natalia Belen
Wijesiri, Kithmini
Gascón, José A.
author_role author
author2 Pigni, Natalia Belen
Wijesiri, Kithmini
Gascón, José A.
author2_role author
author
author
dc.subject.none.fl_str_mv CANTHAXANTHIN
HCP2
QM/MM
topic CANTHAXANTHIN
HCP2
QM/MM
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.4
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv The increased interest in sequencing cyanobacterial genomes has allowed the identifi-cation of new homologs to both the N-terminal domain (NTD) and C-terminal domain (CTD) of the Orange Carotenoid Protein (OCP). The N-terminal domain homologs are known as Helical Carotenoid Proteins (HCPs). Although some of these paralogs have been reported to act as singlet oxygen quenchers, their distinct functional roles remain unclear. One of these paralogs (HCP2) exclusively binds canthaxanthin (CAN) and its crystal structure has been recently characterized. Its absorption spectrum is significantly red-shifted, in comparison to the protein in solution, due to a dimerization where the two carotenoids are closely placed, favoring an electronic coupling interaction. Both the crystal and solution spectra are red-shifted by more than 50 nm when compared to canthaxanthin in solution. Using molecular dynamics (MD) and quantum mechanical/molecular mechanical (QM/MM) studies of HCP2, we aim to simulate these shifts as well as obtain insight into the environmental and coupling effects of carotenoid–protein interactions.
Fil: Nixon, Kevin Clark. University of Connecticut; Estados Unidos
Fil: Pigni, Natalia Belen. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Ciencia y Tecnología de Alimentos Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Ciencia y Tecnología de Alimentos Córdoba; Argentina. University of Connecticut; Estados Unidos
Fil: Wijesiri, Kithmini. University of Connecticut; Estados Unidos
Fil: Gascón, José A.. University of Connecticut; Estados Unidos
description The increased interest in sequencing cyanobacterial genomes has allowed the identifi-cation of new homologs to both the N-terminal domain (NTD) and C-terminal domain (CTD) of the Orange Carotenoid Protein (OCP). The N-terminal domain homologs are known as Helical Carotenoid Proteins (HCPs). Although some of these paralogs have been reported to act as singlet oxygen quenchers, their distinct functional roles remain unclear. One of these paralogs (HCP2) exclusively binds canthaxanthin (CAN) and its crystal structure has been recently characterized. Its absorption spectrum is significantly red-shifted, in comparison to the protein in solution, due to a dimerization where the two carotenoids are closely placed, favoring an electronic coupling interaction. Both the crystal and solution spectra are red-shifted by more than 50 nm when compared to canthaxanthin in solution. Using molecular dynamics (MD) and quantum mechanical/molecular mechanical (QM/MM) studies of HCP2, we aim to simulate these shifts as well as obtain insight into the environmental and coupling effects of carotenoid–protein interactions.
publishDate 2021
dc.date.none.fl_str_mv 2021-04-22
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/184611
Nixon, Kevin Clark; Pigni, Natalia Belen; Wijesiri, Kithmini; Gascón, José A.; Spectral features of canthaxanthin in hcp2. A qm/mm approach; Molecular Diversity Preservation International; Molecules; 26; 9; 22-4-2021; 1-10
1420-3049
CONICET Digital
CONICET
url http://hdl.handle.net/11336/184611
identifier_str_mv Nixon, Kevin Clark; Pigni, Natalia Belen; Wijesiri, Kithmini; Gascón, José A.; Spectral features of canthaxanthin in hcp2. A qm/mm approach; Molecular Diversity Preservation International; Molecules; 26; 9; 22-4-2021; 1-10
1420-3049
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://www.mdpi.com/1420-3049/26/9/2441
info:eu-repo/semantics/altIdentifier/doi/10.3390/molecules26092441
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Molecular Diversity Preservation International
publisher.none.fl_str_mv Molecular Diversity Preservation International
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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