Spectral features of canthaxanthin in hcp2. A qm/mm approach
- Autores
- Nixon, Kevin Clark; Pigni, Natalia Belen; Wijesiri, Kithmini; Gascón, José A.
- Año de publicación
- 2021
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- The increased interest in sequencing cyanobacterial genomes has allowed the identifi-cation of new homologs to both the N-terminal domain (NTD) and C-terminal domain (CTD) of the Orange Carotenoid Protein (OCP). The N-terminal domain homologs are known as Helical Carotenoid Proteins (HCPs). Although some of these paralogs have been reported to act as singlet oxygen quenchers, their distinct functional roles remain unclear. One of these paralogs (HCP2) exclusively binds canthaxanthin (CAN) and its crystal structure has been recently characterized. Its absorption spectrum is significantly red-shifted, in comparison to the protein in solution, due to a dimerization where the two carotenoids are closely placed, favoring an electronic coupling interaction. Both the crystal and solution spectra are red-shifted by more than 50 nm when compared to canthaxanthin in solution. Using molecular dynamics (MD) and quantum mechanical/molecular mechanical (QM/MM) studies of HCP2, we aim to simulate these shifts as well as obtain insight into the environmental and coupling effects of carotenoid–protein interactions.
Fil: Nixon, Kevin Clark. University of Connecticut; Estados Unidos
Fil: Pigni, Natalia Belen. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Ciencia y Tecnología de Alimentos Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Ciencia y Tecnología de Alimentos Córdoba; Argentina. University of Connecticut; Estados Unidos
Fil: Wijesiri, Kithmini. University of Connecticut; Estados Unidos
Fil: Gascón, José A.. University of Connecticut; Estados Unidos - Materia
-
CANTHAXANTHIN
HCP2
QM/MM - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/184611
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Spectral features of canthaxanthin in hcp2. A qm/mm approachNixon, Kevin ClarkPigni, Natalia BelenWijesiri, KithminiGascón, José A.CANTHAXANTHINHCP2QM/MMhttps://purl.org/becyt/ford/1.4https://purl.org/becyt/ford/1The increased interest in sequencing cyanobacterial genomes has allowed the identifi-cation of new homologs to both the N-terminal domain (NTD) and C-terminal domain (CTD) of the Orange Carotenoid Protein (OCP). The N-terminal domain homologs are known as Helical Carotenoid Proteins (HCPs). Although some of these paralogs have been reported to act as singlet oxygen quenchers, their distinct functional roles remain unclear. One of these paralogs (HCP2) exclusively binds canthaxanthin (CAN) and its crystal structure has been recently characterized. Its absorption spectrum is significantly red-shifted, in comparison to the protein in solution, due to a dimerization where the two carotenoids are closely placed, favoring an electronic coupling interaction. Both the crystal and solution spectra are red-shifted by more than 50 nm when compared to canthaxanthin in solution. Using molecular dynamics (MD) and quantum mechanical/molecular mechanical (QM/MM) studies of HCP2, we aim to simulate these shifts as well as obtain insight into the environmental and coupling effects of carotenoid–protein interactions.Fil: Nixon, Kevin Clark. University of Connecticut; Estados UnidosFil: Pigni, Natalia Belen. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Ciencia y Tecnología de Alimentos Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Ciencia y Tecnología de Alimentos Córdoba; Argentina. University of Connecticut; Estados UnidosFil: Wijesiri, Kithmini. University of Connecticut; Estados UnidosFil: Gascón, José A.. University of Connecticut; Estados UnidosMolecular Diversity Preservation International2021-04-22info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/184611Nixon, Kevin Clark; Pigni, Natalia Belen; Wijesiri, Kithmini; Gascón, José A.; Spectral features of canthaxanthin in hcp2. A qm/mm approach; Molecular Diversity Preservation International; Molecules; 26; 9; 22-4-2021; 1-101420-3049CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://www.mdpi.com/1420-3049/26/9/2441info:eu-repo/semantics/altIdentifier/doi/10.3390/molecules26092441info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T10:11:34Zoai:ri.conicet.gov.ar:11336/184611instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 10:11:35.154CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
Spectral features of canthaxanthin in hcp2. A qm/mm approach |
title |
Spectral features of canthaxanthin in hcp2. A qm/mm approach |
spellingShingle |
Spectral features of canthaxanthin in hcp2. A qm/mm approach Nixon, Kevin Clark CANTHAXANTHIN HCP2 QM/MM |
title_short |
Spectral features of canthaxanthin in hcp2. A qm/mm approach |
title_full |
Spectral features of canthaxanthin in hcp2. A qm/mm approach |
title_fullStr |
Spectral features of canthaxanthin in hcp2. A qm/mm approach |
title_full_unstemmed |
Spectral features of canthaxanthin in hcp2. A qm/mm approach |
title_sort |
Spectral features of canthaxanthin in hcp2. A qm/mm approach |
dc.creator.none.fl_str_mv |
Nixon, Kevin Clark Pigni, Natalia Belen Wijesiri, Kithmini Gascón, José A. |
author |
Nixon, Kevin Clark |
author_facet |
Nixon, Kevin Clark Pigni, Natalia Belen Wijesiri, Kithmini Gascón, José A. |
author_role |
author |
author2 |
Pigni, Natalia Belen Wijesiri, Kithmini Gascón, José A. |
author2_role |
author author author |
dc.subject.none.fl_str_mv |
CANTHAXANTHIN HCP2 QM/MM |
topic |
CANTHAXANTHIN HCP2 QM/MM |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.4 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
The increased interest in sequencing cyanobacterial genomes has allowed the identifi-cation of new homologs to both the N-terminal domain (NTD) and C-terminal domain (CTD) of the Orange Carotenoid Protein (OCP). The N-terminal domain homologs are known as Helical Carotenoid Proteins (HCPs). Although some of these paralogs have been reported to act as singlet oxygen quenchers, their distinct functional roles remain unclear. One of these paralogs (HCP2) exclusively binds canthaxanthin (CAN) and its crystal structure has been recently characterized. Its absorption spectrum is significantly red-shifted, in comparison to the protein in solution, due to a dimerization where the two carotenoids are closely placed, favoring an electronic coupling interaction. Both the crystal and solution spectra are red-shifted by more than 50 nm when compared to canthaxanthin in solution. Using molecular dynamics (MD) and quantum mechanical/molecular mechanical (QM/MM) studies of HCP2, we aim to simulate these shifts as well as obtain insight into the environmental and coupling effects of carotenoid–protein interactions. Fil: Nixon, Kevin Clark. University of Connecticut; Estados Unidos Fil: Pigni, Natalia Belen. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Ciencia y Tecnología de Alimentos Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Ciencia y Tecnología de Alimentos Córdoba; Argentina. University of Connecticut; Estados Unidos Fil: Wijesiri, Kithmini. University of Connecticut; Estados Unidos Fil: Gascón, José A.. University of Connecticut; Estados Unidos |
description |
The increased interest in sequencing cyanobacterial genomes has allowed the identifi-cation of new homologs to both the N-terminal domain (NTD) and C-terminal domain (CTD) of the Orange Carotenoid Protein (OCP). The N-terminal domain homologs are known as Helical Carotenoid Proteins (HCPs). Although some of these paralogs have been reported to act as singlet oxygen quenchers, their distinct functional roles remain unclear. One of these paralogs (HCP2) exclusively binds canthaxanthin (CAN) and its crystal structure has been recently characterized. Its absorption spectrum is significantly red-shifted, in comparison to the protein in solution, due to a dimerization where the two carotenoids are closely placed, favoring an electronic coupling interaction. Both the crystal and solution spectra are red-shifted by more than 50 nm when compared to canthaxanthin in solution. Using molecular dynamics (MD) and quantum mechanical/molecular mechanical (QM/MM) studies of HCP2, we aim to simulate these shifts as well as obtain insight into the environmental and coupling effects of carotenoid–protein interactions. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-04-22 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/184611 Nixon, Kevin Clark; Pigni, Natalia Belen; Wijesiri, Kithmini; Gascón, José A.; Spectral features of canthaxanthin in hcp2. A qm/mm approach; Molecular Diversity Preservation International; Molecules; 26; 9; 22-4-2021; 1-10 1420-3049 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/184611 |
identifier_str_mv |
Nixon, Kevin Clark; Pigni, Natalia Belen; Wijesiri, Kithmini; Gascón, José A.; Spectral features of canthaxanthin in hcp2. A qm/mm approach; Molecular Diversity Preservation International; Molecules; 26; 9; 22-4-2021; 1-10 1420-3049 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/url/https://www.mdpi.com/1420-3049/26/9/2441 info:eu-repo/semantics/altIdentifier/doi/10.3390/molecules26092441 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
Molecular Diversity Preservation International |
publisher.none.fl_str_mv |
Molecular Diversity Preservation International |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
reponame_str |
CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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13.13397 |