Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation
- Autores
- Fabro, Georgina; Di Rienzo, Julio Alejandro; Voigt, Christian A.; Savchenko, Tatyana; Dehesh, Katayoon; Somerville, Shauna; Alvarez, Maria Elena
- Año de publicación
- 2008
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Compatibility between plants and obligate biotrophic fungi requires fungal mechanisms for efficiently obtaining nutrients andcounteracting plant defenses under conditions that are expected to induce changes in the host transcriptome. A key step in theproliferation of biotrophic fungi is haustorium differentiation. Here we analyzed global gene expression patterns in Arabidopsisthaliana leaves during the formation of haustoria by Golovinomyces cichoracearum. At this time, the endogenous levels of salicylicacid (SA) and jasmonic acid (JA) were found to be enhanced. The responses of wild-type, npr1-1, and jar1-1 plants were used tocategorize the sensitivity of gene expression changes to NPR1 and JAR1, which are components of the SA and JA signalingpathways, respectively. We found that the infection process was the major source of variation, with 70 genes identified ashaving similarly altered expression patterns regardless of plant genotype. In addition, principal component analysis (PCA)identified genes responding both to infection and to lack of functional JAR1 (17 genes) or NPR1 (18 genes), indicating that theJA and SA signaling pathways function as secondary sources of variation. Participation of these genes in the SA or JA pathways had not been described previously. We found that some of these genes may be sensitive to the balance between the SA and JA pathways, representing novel markers for the elucidation of cross-talk points between these signaling cascades.Conserved putative regulatory motifs were found in the promoter regions of each subset of genes. Collectively, our results indicate that gene expression changes in response to infection by obligate biotrophic fungi may support fungal nutrition by promoting alterations in host metabolism. In addition, these studies provide novel markers for the characterization of defense pathways and susceptibility features under this infection condition.
Fil: Fabro, Georgina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Química Biológica de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Centro de Investigaciones en Química Biológica de Córdoba; Argentina
Fil: Di Rienzo, Julio Alejandro. University of California at Davis; Estados Unidos
Fil: Voigt, Christian A.. University of Stanford; Estados Unidos
Fil: Savchenko, Tatyana. University of Stanford; Estados Unidos
Fil: Dehesh, Katayoon. University of Stanford; Estados Unidos
Fil: Somerville, Shauna. University of Stanford; Estados Unidos
Fil: Alvarez, Maria Elena. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Química Biológica de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Centro de Investigaciones en Química Biológica de Córdoba; Argentina - Materia
-
EXPRESSION PROFILING
GOLOVINOMYCES CICHORACEARUM
PLANT-PATHOGEN INTERACTIONS
BIOTROPHY - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/242603
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Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation Fabro, GeorginaDi Rienzo, Julio AlejandroVoigt, Christian A.Savchenko, TatyanaDehesh, KatayoonSomerville, ShaunaAlvarez, Maria ElenaEXPRESSION PROFILINGGOLOVINOMYCES CICHORACEARUMPLANT-PATHOGEN INTERACTIONSBIOTROPHYhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Compatibility between plants and obligate biotrophic fungi requires fungal mechanisms for efficiently obtaining nutrients andcounteracting plant defenses under conditions that are expected to induce changes in the host transcriptome. A key step in theproliferation of biotrophic fungi is haustorium differentiation. Here we analyzed global gene expression patterns in Arabidopsisthaliana leaves during the formation of haustoria by Golovinomyces cichoracearum. At this time, the endogenous levels of salicylicacid (SA) and jasmonic acid (JA) were found to be enhanced. The responses of wild-type, npr1-1, and jar1-1 plants were used tocategorize the sensitivity of gene expression changes to NPR1 and JAR1, which are components of the SA and JA signalingpathways, respectively. We found that the infection process was the major source of variation, with 70 genes identified ashaving similarly altered expression patterns regardless of plant genotype. In addition, principal component analysis (PCA)identified genes responding both to infection and to lack of functional JAR1 (17 genes) or NPR1 (18 genes), indicating that theJA and SA signaling pathways function as secondary sources of variation. Participation of these genes in the SA or JA pathways had not been described previously. We found that some of these genes may be sensitive to the balance between the SA and JA pathways, representing novel markers for the elucidation of cross-talk points between these signaling cascades.Conserved putative regulatory motifs were found in the promoter regions of each subset of genes. Collectively, our results indicate that gene expression changes in response to infection by obligate biotrophic fungi may support fungal nutrition by promoting alterations in host metabolism. In addition, these studies provide novel markers for the characterization of defense pathways and susceptibility features under this infection condition.Fil: Fabro, Georgina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Química Biológica de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Centro de Investigaciones en Química Biológica de Córdoba; ArgentinaFil: Di Rienzo, Julio Alejandro. University of California at Davis; Estados UnidosFil: Voigt, Christian A.. University of Stanford; Estados UnidosFil: Savchenko, Tatyana. University of Stanford; Estados UnidosFil: Dehesh, Katayoon. University of Stanford; Estados UnidosFil: Somerville, Shauna. University of Stanford; Estados UnidosFil: Alvarez, Maria Elena. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Química Biológica de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Centro de Investigaciones en Química Biológica de Córdoba; ArgentinaAmerican Society of Plant Biologist2008-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/242603Fabro, Georgina; Di Rienzo, Julio Alejandro; Voigt, Christian A.; Savchenko, Tatyana; Dehesh, Katayoon; et al.; Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation ; American Society of Plant Biologist; Plant Physiology; 146; 3; 1-2008; 1421-14390032-08891532-2548CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/http://www.plantphysiol.org/content/146/3/1421info:eu-repo/semantics/altIdentifier/doi/10.1104/pp.107.111286info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:34:41Zoai:ri.conicet.gov.ar:11336/242603instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:34:41.645CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation |
title |
Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation |
spellingShingle |
Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation Fabro, Georgina EXPRESSION PROFILING GOLOVINOMYCES CICHORACEARUM PLANT-PATHOGEN INTERACTIONS BIOTROPHY |
title_short |
Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation |
title_full |
Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation |
title_fullStr |
Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation |
title_full_unstemmed |
Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation |
title_sort |
Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation |
dc.creator.none.fl_str_mv |
Fabro, Georgina Di Rienzo, Julio Alejandro Voigt, Christian A. Savchenko, Tatyana Dehesh, Katayoon Somerville, Shauna Alvarez, Maria Elena |
author |
Fabro, Georgina |
author_facet |
Fabro, Georgina Di Rienzo, Julio Alejandro Voigt, Christian A. Savchenko, Tatyana Dehesh, Katayoon Somerville, Shauna Alvarez, Maria Elena |
author_role |
author |
author2 |
Di Rienzo, Julio Alejandro Voigt, Christian A. Savchenko, Tatyana Dehesh, Katayoon Somerville, Shauna Alvarez, Maria Elena |
author2_role |
author author author author author author |
dc.subject.none.fl_str_mv |
EXPRESSION PROFILING GOLOVINOMYCES CICHORACEARUM PLANT-PATHOGEN INTERACTIONS BIOTROPHY |
topic |
EXPRESSION PROFILING GOLOVINOMYCES CICHORACEARUM PLANT-PATHOGEN INTERACTIONS BIOTROPHY |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
Compatibility between plants and obligate biotrophic fungi requires fungal mechanisms for efficiently obtaining nutrients andcounteracting plant defenses under conditions that are expected to induce changes in the host transcriptome. A key step in theproliferation of biotrophic fungi is haustorium differentiation. Here we analyzed global gene expression patterns in Arabidopsisthaliana leaves during the formation of haustoria by Golovinomyces cichoracearum. At this time, the endogenous levels of salicylicacid (SA) and jasmonic acid (JA) were found to be enhanced. The responses of wild-type, npr1-1, and jar1-1 plants were used tocategorize the sensitivity of gene expression changes to NPR1 and JAR1, which are components of the SA and JA signalingpathways, respectively. We found that the infection process was the major source of variation, with 70 genes identified ashaving similarly altered expression patterns regardless of plant genotype. In addition, principal component analysis (PCA)identified genes responding both to infection and to lack of functional JAR1 (17 genes) or NPR1 (18 genes), indicating that theJA and SA signaling pathways function as secondary sources of variation. Participation of these genes in the SA or JA pathways had not been described previously. We found that some of these genes may be sensitive to the balance between the SA and JA pathways, representing novel markers for the elucidation of cross-talk points between these signaling cascades.Conserved putative regulatory motifs were found in the promoter regions of each subset of genes. Collectively, our results indicate that gene expression changes in response to infection by obligate biotrophic fungi may support fungal nutrition by promoting alterations in host metabolism. In addition, these studies provide novel markers for the characterization of defense pathways and susceptibility features under this infection condition. Fil: Fabro, Georgina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Química Biológica de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Centro de Investigaciones en Química Biológica de Córdoba; Argentina Fil: Di Rienzo, Julio Alejandro. University of California at Davis; Estados Unidos Fil: Voigt, Christian A.. University of Stanford; Estados Unidos Fil: Savchenko, Tatyana. University of Stanford; Estados Unidos Fil: Dehesh, Katayoon. University of Stanford; Estados Unidos Fil: Somerville, Shauna. University of Stanford; Estados Unidos Fil: Alvarez, Maria Elena. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Química Biológica de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Centro de Investigaciones en Química Biológica de Córdoba; Argentina |
description |
Compatibility between plants and obligate biotrophic fungi requires fungal mechanisms for efficiently obtaining nutrients andcounteracting plant defenses under conditions that are expected to induce changes in the host transcriptome. A key step in theproliferation of biotrophic fungi is haustorium differentiation. Here we analyzed global gene expression patterns in Arabidopsisthaliana leaves during the formation of haustoria by Golovinomyces cichoracearum. At this time, the endogenous levels of salicylicacid (SA) and jasmonic acid (JA) were found to be enhanced. The responses of wild-type, npr1-1, and jar1-1 plants were used tocategorize the sensitivity of gene expression changes to NPR1 and JAR1, which are components of the SA and JA signalingpathways, respectively. We found that the infection process was the major source of variation, with 70 genes identified ashaving similarly altered expression patterns regardless of plant genotype. In addition, principal component analysis (PCA)identified genes responding both to infection and to lack of functional JAR1 (17 genes) or NPR1 (18 genes), indicating that theJA and SA signaling pathways function as secondary sources of variation. Participation of these genes in the SA or JA pathways had not been described previously. We found that some of these genes may be sensitive to the balance between the SA and JA pathways, representing novel markers for the elucidation of cross-talk points between these signaling cascades.Conserved putative regulatory motifs were found in the promoter regions of each subset of genes. Collectively, our results indicate that gene expression changes in response to infection by obligate biotrophic fungi may support fungal nutrition by promoting alterations in host metabolism. In addition, these studies provide novel markers for the characterization of defense pathways and susceptibility features under this infection condition. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-01 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/242603 Fabro, Georgina; Di Rienzo, Julio Alejandro; Voigt, Christian A.; Savchenko, Tatyana; Dehesh, Katayoon; et al.; Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation ; American Society of Plant Biologist; Plant Physiology; 146; 3; 1-2008; 1421-1439 0032-0889 1532-2548 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/242603 |
identifier_str_mv |
Fabro, Georgina; Di Rienzo, Julio Alejandro; Voigt, Christian A.; Savchenko, Tatyana; Dehesh, Katayoon; et al.; Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation ; American Society of Plant Biologist; Plant Physiology; 146; 3; 1-2008; 1421-1439 0032-0889 1532-2548 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/url/http://www.plantphysiol.org/content/146/3/1421 info:eu-repo/semantics/altIdentifier/doi/10.1104/pp.107.111286 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf application/pdf application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
American Society of Plant Biologist |
publisher.none.fl_str_mv |
American Society of Plant Biologist |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
reponame_str |
CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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1844614363429732352 |
score |
13.070432 |