Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    

Autores
Fabro, Georgina; Di Rienzo, Julio Alejandro; Voigt, Christian A.; Savchenko, Tatyana; Dehesh, Katayoon; Somerville, Shauna; Alvarez, Maria Elena
Año de publicación
2008
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Compatibility between plants and obligate biotrophic fungi requires fungal mechanisms for efficiently obtaining nutrients andcounteracting plant defenses under conditions that are expected to induce changes in the host transcriptome. A key step in theproliferation of biotrophic fungi is haustorium differentiation. Here we analyzed global gene expression patterns in Arabidopsisthaliana leaves during the formation of haustoria by Golovinomyces cichoracearum. At this time, the endogenous levels of salicylicacid (SA) and jasmonic acid (JA) were found to be enhanced. The responses of wild-type, npr1-1, and jar1-1 plants were used tocategorize the sensitivity of gene expression changes to NPR1 and JAR1, which are components of the SA and JA signalingpathways, respectively. We found that the infection process was the major source of variation, with 70 genes identified ashaving similarly altered expression patterns regardless of plant genotype. In addition, principal component analysis (PCA)identified genes responding both to infection and to lack of functional JAR1 (17 genes) or NPR1 (18 genes), indicating that theJA and SA signaling pathways function as secondary sources of variation. Participation of these genes in the SA or JA pathways had not been described previously. We found that some of these genes may be sensitive to the balance between the SA and JA pathways, representing novel markers for the elucidation of cross-talk points between these signaling cascades.Conserved putative regulatory motifs were found in the promoter regions of each subset of genes. Collectively, our results indicate that gene expression changes in response to infection by obligate biotrophic fungi may support fungal nutrition by promoting alterations in host metabolism. In addition, these studies provide novel markers for the characterization of defense pathways and susceptibility features under this infection condition.
Fil: Fabro, Georgina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Química Biológica de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Centro de Investigaciones en Química Biológica de Córdoba; Argentina
Fil: Di Rienzo, Julio Alejandro. University of California at Davis; Estados Unidos
Fil: Voigt, Christian A.. University of Stanford; Estados Unidos
Fil: Savchenko, Tatyana. University of Stanford; Estados Unidos
Fil: Dehesh, Katayoon. University of Stanford; Estados Unidos
Fil: Somerville, Shauna. University of Stanford; Estados Unidos
Fil: Alvarez, Maria Elena. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Química Biológica de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Centro de Investigaciones en Química Biológica de Córdoba; Argentina
Materia
EXPRESSION PROFILING
GOLOVINOMYCES CICHORACEARUM
PLANT-PATHOGEN INTERACTIONS
BIOTROPHY
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/242603

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network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    Fabro, GeorginaDi Rienzo, Julio AlejandroVoigt, Christian A.Savchenko, TatyanaDehesh, KatayoonSomerville, ShaunaAlvarez, Maria ElenaEXPRESSION PROFILINGGOLOVINOMYCES CICHORACEARUMPLANT-PATHOGEN INTERACTIONSBIOTROPHYhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Compatibility between plants and obligate biotrophic fungi requires fungal mechanisms for efficiently obtaining nutrients andcounteracting plant defenses under conditions that are expected to induce changes in the host transcriptome. A key step in theproliferation of biotrophic fungi is haustorium differentiation. Here we analyzed global gene expression patterns in Arabidopsisthaliana leaves during the formation of haustoria by Golovinomyces cichoracearum. At this time, the endogenous levels of salicylicacid (SA) and jasmonic acid (JA) were found to be enhanced. The responses of wild-type, npr1-1, and jar1-1 plants were used tocategorize the sensitivity of gene expression changes to NPR1 and JAR1, which are components of the SA and JA signalingpathways, respectively. We found that the infection process was the major source of variation, with 70 genes identified ashaving similarly altered expression patterns regardless of plant genotype. In addition, principal component analysis (PCA)identified genes responding both to infection and to lack of functional JAR1 (17 genes) or NPR1 (18 genes), indicating that theJA and SA signaling pathways function as secondary sources of variation. Participation of these genes in the SA or JA pathways had not been described previously. We found that some of these genes may be sensitive to the balance between the SA and JA pathways, representing novel markers for the elucidation of cross-talk points between these signaling cascades.Conserved putative regulatory motifs were found in the promoter regions of each subset of genes. Collectively, our results indicate that gene expression changes in response to infection by obligate biotrophic fungi may support fungal nutrition by promoting alterations in host metabolism. In addition, these studies provide novel markers for the characterization of defense pathways and susceptibility features under this infection condition.Fil: Fabro, Georgina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Química Biológica de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Centro de Investigaciones en Química Biológica de Córdoba; ArgentinaFil: Di Rienzo, Julio Alejandro. University of California at Davis; Estados UnidosFil: Voigt, Christian A.. University of Stanford; Estados UnidosFil: Savchenko, Tatyana. University of Stanford; Estados UnidosFil: Dehesh, Katayoon. University of Stanford; Estados UnidosFil: Somerville, Shauna. University of Stanford; Estados UnidosFil: Alvarez, Maria Elena. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Química Biológica de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Centro de Investigaciones en Química Biológica de Córdoba; ArgentinaAmerican Society of Plant Biologist2008-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/242603Fabro, Georgina; Di Rienzo, Julio Alejandro; Voigt, Christian A.; Savchenko, Tatyana; Dehesh, Katayoon; et al.; Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    ; American Society of Plant Biologist; Plant Physiology; 146; 3; 1-2008; 1421-14390032-08891532-2548CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/http://www.plantphysiol.org/content/146/3/1421info:eu-repo/semantics/altIdentifier/doi/10.1104/pp.107.111286info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:34:41Zoai:ri.conicet.gov.ar:11336/242603instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:34:41.645CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    
title Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    
spellingShingle Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    
Fabro, Georgina
EXPRESSION PROFILING
GOLOVINOMYCES CICHORACEARUM
PLANT-PATHOGEN INTERACTIONS
BIOTROPHY
title_short Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    
title_full Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    
title_fullStr Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    
title_full_unstemmed Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    
title_sort Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    
dc.creator.none.fl_str_mv Fabro, Georgina
Di Rienzo, Julio Alejandro
Voigt, Christian A.
Savchenko, Tatyana
Dehesh, Katayoon
Somerville, Shauna
Alvarez, Maria Elena
author Fabro, Georgina
author_facet Fabro, Georgina
Di Rienzo, Julio Alejandro
Voigt, Christian A.
Savchenko, Tatyana
Dehesh, Katayoon
Somerville, Shauna
Alvarez, Maria Elena
author_role author
author2 Di Rienzo, Julio Alejandro
Voigt, Christian A.
Savchenko, Tatyana
Dehesh, Katayoon
Somerville, Shauna
Alvarez, Maria Elena
author2_role author
author
author
author
author
author
dc.subject.none.fl_str_mv EXPRESSION PROFILING
GOLOVINOMYCES CICHORACEARUM
PLANT-PATHOGEN INTERACTIONS
BIOTROPHY
topic EXPRESSION PROFILING
GOLOVINOMYCES CICHORACEARUM
PLANT-PATHOGEN INTERACTIONS
BIOTROPHY
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Compatibility between plants and obligate biotrophic fungi requires fungal mechanisms for efficiently obtaining nutrients andcounteracting plant defenses under conditions that are expected to induce changes in the host transcriptome. A key step in theproliferation of biotrophic fungi is haustorium differentiation. Here we analyzed global gene expression patterns in Arabidopsisthaliana leaves during the formation of haustoria by Golovinomyces cichoracearum. At this time, the endogenous levels of salicylicacid (SA) and jasmonic acid (JA) were found to be enhanced. The responses of wild-type, npr1-1, and jar1-1 plants were used tocategorize the sensitivity of gene expression changes to NPR1 and JAR1, which are components of the SA and JA signalingpathways, respectively. We found that the infection process was the major source of variation, with 70 genes identified ashaving similarly altered expression patterns regardless of plant genotype. In addition, principal component analysis (PCA)identified genes responding both to infection and to lack of functional JAR1 (17 genes) or NPR1 (18 genes), indicating that theJA and SA signaling pathways function as secondary sources of variation. Participation of these genes in the SA or JA pathways had not been described previously. We found that some of these genes may be sensitive to the balance between the SA and JA pathways, representing novel markers for the elucidation of cross-talk points between these signaling cascades.Conserved putative regulatory motifs were found in the promoter regions of each subset of genes. Collectively, our results indicate that gene expression changes in response to infection by obligate biotrophic fungi may support fungal nutrition by promoting alterations in host metabolism. In addition, these studies provide novel markers for the characterization of defense pathways and susceptibility features under this infection condition.
Fil: Fabro, Georgina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Química Biológica de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Centro de Investigaciones en Química Biológica de Córdoba; Argentina
Fil: Di Rienzo, Julio Alejandro. University of California at Davis; Estados Unidos
Fil: Voigt, Christian A.. University of Stanford; Estados Unidos
Fil: Savchenko, Tatyana. University of Stanford; Estados Unidos
Fil: Dehesh, Katayoon. University of Stanford; Estados Unidos
Fil: Somerville, Shauna. University of Stanford; Estados Unidos
Fil: Alvarez, Maria Elena. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Química Biológica de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Centro de Investigaciones en Química Biológica de Córdoba; Argentina
description Compatibility between plants and obligate biotrophic fungi requires fungal mechanisms for efficiently obtaining nutrients andcounteracting plant defenses under conditions that are expected to induce changes in the host transcriptome. A key step in theproliferation of biotrophic fungi is haustorium differentiation. Here we analyzed global gene expression patterns in Arabidopsisthaliana leaves during the formation of haustoria by Golovinomyces cichoracearum. At this time, the endogenous levels of salicylicacid (SA) and jasmonic acid (JA) were found to be enhanced. The responses of wild-type, npr1-1, and jar1-1 plants were used tocategorize the sensitivity of gene expression changes to NPR1 and JAR1, which are components of the SA and JA signalingpathways, respectively. We found that the infection process was the major source of variation, with 70 genes identified ashaving similarly altered expression patterns regardless of plant genotype. In addition, principal component analysis (PCA)identified genes responding both to infection and to lack of functional JAR1 (17 genes) or NPR1 (18 genes), indicating that theJA and SA signaling pathways function as secondary sources of variation. Participation of these genes in the SA or JA pathways had not been described previously. We found that some of these genes may be sensitive to the balance between the SA and JA pathways, representing novel markers for the elucidation of cross-talk points between these signaling cascades.Conserved putative regulatory motifs were found in the promoter regions of each subset of genes. Collectively, our results indicate that gene expression changes in response to infection by obligate biotrophic fungi may support fungal nutrition by promoting alterations in host metabolism. In addition, these studies provide novel markers for the characterization of defense pathways and susceptibility features under this infection condition.
publishDate 2008
dc.date.none.fl_str_mv 2008-01
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/242603
Fabro, Georgina; Di Rienzo, Julio Alejandro; Voigt, Christian A.; Savchenko, Tatyana; Dehesh, Katayoon; et al.; Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    ; American Society of Plant Biologist; Plant Physiology; 146; 3; 1-2008; 1421-1439
0032-0889
1532-2548
CONICET Digital
CONICET
url http://hdl.handle.net/11336/242603
identifier_str_mv Fabro, Georgina; Di Rienzo, Julio Alejandro; Voigt, Christian A.; Savchenko, Tatyana; Dehesh, Katayoon; et al.; Genome-Wide Expression Profiling Arabidopsis at the Stage of Golovinomyces cichoracearum Haustorium Formation    ; American Society of Plant Biologist; Plant Physiology; 146; 3; 1-2008; 1421-1439
0032-0889
1532-2548
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/http://www.plantphysiol.org/content/146/3/1421
info:eu-repo/semantics/altIdentifier/doi/10.1104/pp.107.111286
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
application/pdf
application/pdf
application/pdf
dc.publisher.none.fl_str_mv American Society of Plant Biologist
publisher.none.fl_str_mv American Society of Plant Biologist
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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