Coordination of peroxide to the CuM center of peptidylglycine α-hydroxylating monooxygenase (PHM): Structural and computational study

• Autores: Rudzka, Katarzyna; Moreno, Diego Martin; Eipper, Betty; Mains, Richard; Estrin, Dario Ariel; Amzel, L. Mario
• Año de publicación: 2013
• Idioma: inglés
• Tipo de recurso: artículo
• Materia: AMIDATION OF PEPTIDES; COPPER-CONTAINING PROTEINS; PEPTIDYLGLYCINE Α-HYDROXYLATING MONOOXYGENASE; PEROXIDE
• Institución: Consejo Nacional de Investigaciones Científicas y Técnicas

Many bioactive peptides, such as hormones and neuropeptides, require amidation at the C terminus for their full biological activity. Peptidylglycine a-hydroxylating monooxygenase (PHM) performs the first step of the amidation reaction-the hydroxylation of peptidylglycine substrates at the Ca position of the terminal glycine. The hydroxylation reaction is copper- and O2-dependent and requires 2 equiv of exogenous reductant. The proposed mechanism suggests thatO2 is reduced by two electrons, each provided by one of two nonequivalent copper sites in PHM (CuH and CuM). The characteristics of the reduced oxygen species in the PHM reaction and the identity of the reactive intermediate remain uncertain. To further investigate the nature of the key intermediates in the PHM cycle, we determined the structure of the oxidized form of PHM complexed with hydrogen peroxide. In this 1.98-A° -resolution structure (hydro)peroxide binds solely to CuM in a slightly asymmetric side-on mode. The O-O interatomic distance of the copperbound ligand is 1.5 A ° , characteristic of peroxide/hydroperoxide species, and the Cu-O distances are 2.0 and 2.1 A ° . Density functional theory calculations using the first coordination sphere of the CuM active site as a model system show that the computed energies of the side-on L3CuM(II)-O2 2- species and its isomeric, end-on structure L3CuM(I)-O2 - are similar, suggesting that both these intermediates are significantly populated within the protein environment. This observation has important mechanistic implications. The geometry of the observed side-on coordinated peroxide ligand in L3CuM(II)O2 2- is in good agreement with the results of a hybrid quantum mechanical-molecular mechanical optimization of this species.
Fil: Rudzka, Katarzyna. University Johns Hopkins; Estados Unidos
Fil: Moreno, Diego Martin. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Rosario. Instituto de Química Rosario; Argentina. Universidad de Buenos Aires; Argentina
Fil: Eipper, Betty. University Of Connecticut; Estados Unidos
Fil: Mains, Richard. University Of Connecticut; Estados Unidos
Fil: Estrin, Dario Ariel. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Química, Física de los Materiales, Medioambiente y Energía; Argentina. Universidad de Buenos Aires; Argentina
Fil: Amzel, L. Mario. University Johns Hopkins; Estados Unidos