Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars
- Autores
- Basile, Marisol; Burrell, Mike M.; Walker, Heather J.; Cardozo, Jorge A.; Steels, Chloe; Kallenberg, Felix; Tognetti, Jorge Alberto; Dalla Valle, Horacio R.; Rogers, John William
- Año de publicación
- 2018
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- In a proof of concept study aimed at showing that metabolites in bread wheat (Triticum aestivum L. ssp. aestivum), phloem exudates have potential as biochemical markers for cultivar discrimination, Argentinean cultivars from three quality groups (groups 1, 2, and 3 of high, intermediate, and low quality, respectively) were grown under two nitrogen (N) availabilities and analysed for metabolic profile by electrospray ionisation mass spectrometry. Data as signal strengths of mass/charge (m/z) values binned to a resolution of 0.2 Daltons were subjected to principal component analysis and orthogonal projections to latent structures discriminant analysis. Certain bins were influential in discriminating groups taken in pairs and some were involved in separating all three groups. In high N availability, group 3 cultivars clustered away from the other cultivars, while group 1 cultivars clustered tightly together; group 2 cultivars were more scattered between group 1 and group 3 cultivars. In low N availability, the cultivars were not clustered as tightly; nonetheless, group 1 cultivars tended to cluster together and mainly separated from those of group 2. m/z values also showed potential for discrimination between N availability. In conclusion, phloem exudate metabolic profiles could provide biochemical markers for selection during breeding and for discerning the effects of N fertiliser application.
- Materia
-
Agronomía, reproducción y protección de plantas
phloem metabolites
electrospray ionisation
mass spectrometry
cultivar
quality groups
nitrogen - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- http://creativecommons.org/licenses/by/4.0/
- Repositorio
- Institución
- Comisión de Investigaciones Científicas de la Provincia de Buenos Aires
- OAI Identificador
- oai:digital.cic.gba.gob.ar:11746/10143
Ver los metadatos del registro completo
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Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat CultivarsBasile, MarisolBurrell, Mike M.Walker, Heather J.Cardozo, Jorge A.Steels, ChloeKallenberg, FelixTognetti, Jorge AlbertoDalla Valle, Horacio R.Rogers, John WilliamAgronomía, reproducción y protección de plantasphloem metaboliteselectrospray ionisationmass spectrometrycultivarquality groupsnitrogenIn a proof of concept study aimed at showing that metabolites in bread wheat (Triticum aestivum L. ssp. aestivum), phloem exudates have potential as biochemical markers for cultivar discrimination, Argentinean cultivars from three quality groups (groups 1, 2, and 3 of high, intermediate, and low quality, respectively) were grown under two nitrogen (N) availabilities and analysed for metabolic profile by electrospray ionisation mass spectrometry. Data as signal strengths of mass/charge (m/z) values binned to a resolution of 0.2 Daltons were subjected to principal component analysis and orthogonal projections to latent structures discriminant analysis. Certain bins were influential in discriminating groups taken in pairs and some were involved in separating all three groups. In high N availability, group 3 cultivars clustered away from the other cultivars, while group 1 cultivars clustered tightly together; group 2 cultivars were more scattered between group 1 and group 3 cultivars. In low N availability, the cultivars were not clustered as tightly; nonetheless, group 1 cultivars tended to cluster together and mainly separated from those of group 2. m/z values also showed potential for discrimination between N availability. In conclusion, phloem exudate metabolic profiles could provide biochemical markers for selection during breeding and for discerning the effects of N fertiliser application.2018-04-10info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttps://digital.cic.gba.gob.ar/handle/11746/10143enginfo:eu-repo/semantics/altIdentifier/doi/10.3390/agronomy8040045info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/4.0/reponame:CIC Digital (CICBA)instname:Comisión de Investigaciones Científicas de la Provincia de Buenos Airesinstacron:CICBA2025-09-29T13:40:09Zoai:digital.cic.gba.gob.ar:11746/10143Institucionalhttp://digital.cic.gba.gob.arOrganismo científico-tecnológicoNo correspondehttp://digital.cic.gba.gob.ar/oai/snrdmarisa.degiusti@sedici.unlp.edu.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:94412025-09-29 13:40:09.926CIC Digital (CICBA) - Comisión de Investigaciones Científicas de la Provincia de Buenos Airesfalse |
dc.title.none.fl_str_mv |
Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars |
title |
Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars |
spellingShingle |
Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars Basile, Marisol Agronomía, reproducción y protección de plantas phloem metabolites electrospray ionisation mass spectrometry cultivar quality groups nitrogen |
title_short |
Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars |
title_full |
Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars |
title_fullStr |
Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars |
title_full_unstemmed |
Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars |
title_sort |
Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars |
dc.creator.none.fl_str_mv |
Basile, Marisol Burrell, Mike M. Walker, Heather J. Cardozo, Jorge A. Steels, Chloe Kallenberg, Felix Tognetti, Jorge Alberto Dalla Valle, Horacio R. Rogers, John William |
author |
Basile, Marisol |
author_facet |
Basile, Marisol Burrell, Mike M. Walker, Heather J. Cardozo, Jorge A. Steels, Chloe Kallenberg, Felix Tognetti, Jorge Alberto Dalla Valle, Horacio R. Rogers, John William |
author_role |
author |
author2 |
Burrell, Mike M. Walker, Heather J. Cardozo, Jorge A. Steels, Chloe Kallenberg, Felix Tognetti, Jorge Alberto Dalla Valle, Horacio R. Rogers, John William |
author2_role |
author author author author author author author author |
dc.subject.none.fl_str_mv |
Agronomía, reproducción y protección de plantas phloem metabolites electrospray ionisation mass spectrometry cultivar quality groups nitrogen |
topic |
Agronomía, reproducción y protección de plantas phloem metabolites electrospray ionisation mass spectrometry cultivar quality groups nitrogen |
dc.description.none.fl_txt_mv |
In a proof of concept study aimed at showing that metabolites in bread wheat (Triticum aestivum L. ssp. aestivum), phloem exudates have potential as biochemical markers for cultivar discrimination, Argentinean cultivars from three quality groups (groups 1, 2, and 3 of high, intermediate, and low quality, respectively) were grown under two nitrogen (N) availabilities and analysed for metabolic profile by electrospray ionisation mass spectrometry. Data as signal strengths of mass/charge (m/z) values binned to a resolution of 0.2 Daltons were subjected to principal component analysis and orthogonal projections to latent structures discriminant analysis. Certain bins were influential in discriminating groups taken in pairs and some were involved in separating all three groups. In high N availability, group 3 cultivars clustered away from the other cultivars, while group 1 cultivars clustered tightly together; group 2 cultivars were more scattered between group 1 and group 3 cultivars. In low N availability, the cultivars were not clustered as tightly; nonetheless, group 1 cultivars tended to cluster together and mainly separated from those of group 2. m/z values also showed potential for discrimination between N availability. In conclusion, phloem exudate metabolic profiles could provide biochemical markers for selection during breeding and for discerning the effects of N fertiliser application. |
description |
In a proof of concept study aimed at showing that metabolites in bread wheat (Triticum aestivum L. ssp. aestivum), phloem exudates have potential as biochemical markers for cultivar discrimination, Argentinean cultivars from three quality groups (groups 1, 2, and 3 of high, intermediate, and low quality, respectively) were grown under two nitrogen (N) availabilities and analysed for metabolic profile by electrospray ionisation mass spectrometry. Data as signal strengths of mass/charge (m/z) values binned to a resolution of 0.2 Daltons were subjected to principal component analysis and orthogonal projections to latent structures discriminant analysis. Certain bins were influential in discriminating groups taken in pairs and some were involved in separating all three groups. In high N availability, group 3 cultivars clustered away from the other cultivars, while group 1 cultivars clustered tightly together; group 2 cultivars were more scattered between group 1 and group 3 cultivars. In low N availability, the cultivars were not clustered as tightly; nonetheless, group 1 cultivars tended to cluster together and mainly separated from those of group 2. m/z values also showed potential for discrimination between N availability. In conclusion, phloem exudate metabolic profiles could provide biochemical markers for selection during breeding and for discerning the effects of N fertiliser application. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-04-10 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
https://digital.cic.gba.gob.ar/handle/11746/10143 |
url |
https://digital.cic.gba.gob.ar/handle/11746/10143 |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/doi/10.3390/agronomy8040045 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by/4.0/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by/4.0/ |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
reponame:CIC Digital (CICBA) instname:Comisión de Investigaciones Científicas de la Provincia de Buenos Aires instacron:CICBA |
reponame_str |
CIC Digital (CICBA) |
collection |
CIC Digital (CICBA) |
instname_str |
Comisión de Investigaciones Científicas de la Provincia de Buenos Aires |
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CICBA |
institution |
CICBA |
repository.name.fl_str_mv |
CIC Digital (CICBA) - Comisión de Investigaciones Científicas de la Provincia de Buenos Aires |
repository.mail.fl_str_mv |
marisa.degiusti@sedici.unlp.edu.ar |
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13.070432 |