Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars

Autores
Basile, Marisol; Burrell, Mike M.; Walker, Heather J.; Cardozo, Jorge A.; Steels, Chloe; Kallenberg, Felix; Tognetti, Jorge Alberto; Dalla Valle, Horacio R.; Rogers, John William
Año de publicación
2018
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
In a proof of concept study aimed at showing that metabolites in bread wheat (Triticum aestivum L. ssp. aestivum), phloem exudates have potential as biochemical markers for cultivar discrimination, Argentinean cultivars from three quality groups (groups 1, 2, and 3 of high, intermediate, and low quality, respectively) were grown under two nitrogen (N) availabilities and analysed for metabolic profile by electrospray ionisation mass spectrometry. Data as signal strengths of mass/charge (m/z) values binned to a resolution of 0.2 Daltons were subjected to principal component analysis and orthogonal projections to latent structures discriminant analysis. Certain bins were influential in discriminating groups taken in pairs and some were involved in separating all three groups. In high N availability, group 3 cultivars clustered away from the other cultivars, while group 1 cultivars clustered tightly together; group 2 cultivars were more scattered between group 1 and group 3 cultivars. In low N availability, the cultivars were not clustered as tightly; nonetheless, group 1 cultivars tended to cluster together and mainly separated from those of group 2. m/z values also showed potential for discrimination between N availability. In conclusion, phloem exudate metabolic profiles could provide biochemical markers for selection during breeding and for discerning the effects of N fertiliser application.
Materia
Agronomía, reproducción y protección de plantas
phloem metabolites
electrospray ionisation
mass spectrometry
cultivar
quality groups
nitrogen
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by/4.0/
Repositorio
CIC Digital (CICBA)
Institución
Comisión de Investigaciones Científicas de la Provincia de Buenos Aires
OAI Identificador
oai:digital.cic.gba.gob.ar:11746/10143

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repository_id_str 9441
network_name_str CIC Digital (CICBA)
spelling Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat CultivarsBasile, MarisolBurrell, Mike M.Walker, Heather J.Cardozo, Jorge A.Steels, ChloeKallenberg, FelixTognetti, Jorge AlbertoDalla Valle, Horacio R.Rogers, John WilliamAgronomía, reproducción y protección de plantasphloem metaboliteselectrospray ionisationmass spectrometrycultivarquality groupsnitrogenIn a proof of concept study aimed at showing that metabolites in bread wheat (Triticum aestivum L. ssp. aestivum), phloem exudates have potential as biochemical markers for cultivar discrimination, Argentinean cultivars from three quality groups (groups 1, 2, and 3 of high, intermediate, and low quality, respectively) were grown under two nitrogen (N) availabilities and analysed for metabolic profile by electrospray ionisation mass spectrometry. Data as signal strengths of mass/charge (m/z) values binned to a resolution of 0.2 Daltons were subjected to principal component analysis and orthogonal projections to latent structures discriminant analysis. Certain bins were influential in discriminating groups taken in pairs and some were involved in separating all three groups. In high N availability, group 3 cultivars clustered away from the other cultivars, while group 1 cultivars clustered tightly together; group 2 cultivars were more scattered between group 1 and group 3 cultivars. In low N availability, the cultivars were not clustered as tightly; nonetheless, group 1 cultivars tended to cluster together and mainly separated from those of group 2. m/z values also showed potential for discrimination between N availability. In conclusion, phloem exudate metabolic profiles could provide biochemical markers for selection during breeding and for discerning the effects of N fertiliser application.2018-04-10info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttps://digital.cic.gba.gob.ar/handle/11746/10143enginfo:eu-repo/semantics/altIdentifier/doi/10.3390/agronomy8040045info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/4.0/reponame:CIC Digital (CICBA)instname:Comisión de Investigaciones Científicas de la Provincia de Buenos Airesinstacron:CICBA2025-09-29T13:40:09Zoai:digital.cic.gba.gob.ar:11746/10143Institucionalhttp://digital.cic.gba.gob.arOrganismo científico-tecnológicoNo correspondehttp://digital.cic.gba.gob.ar/oai/snrdmarisa.degiusti@sedici.unlp.edu.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:94412025-09-29 13:40:09.926CIC Digital (CICBA) - Comisión de Investigaciones Científicas de la Provincia de Buenos Airesfalse
dc.title.none.fl_str_mv Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars
title Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars
spellingShingle Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars
Basile, Marisol
Agronomía, reproducción y protección de plantas
phloem metabolites
electrospray ionisation
mass spectrometry
cultivar
quality groups
nitrogen
title_short Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars
title_full Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars
title_fullStr Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars
title_full_unstemmed Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars
title_sort Metabolic Profiling of Phloem Exudates as a Tool to Improve Bread-Wheat Cultivars
dc.creator.none.fl_str_mv Basile, Marisol
Burrell, Mike M.
Walker, Heather J.
Cardozo, Jorge A.
Steels, Chloe
Kallenberg, Felix
Tognetti, Jorge Alberto
Dalla Valle, Horacio R.
Rogers, John William
author Basile, Marisol
author_facet Basile, Marisol
Burrell, Mike M.
Walker, Heather J.
Cardozo, Jorge A.
Steels, Chloe
Kallenberg, Felix
Tognetti, Jorge Alberto
Dalla Valle, Horacio R.
Rogers, John William
author_role author
author2 Burrell, Mike M.
Walker, Heather J.
Cardozo, Jorge A.
Steels, Chloe
Kallenberg, Felix
Tognetti, Jorge Alberto
Dalla Valle, Horacio R.
Rogers, John William
author2_role author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Agronomía, reproducción y protección de plantas
phloem metabolites
electrospray ionisation
mass spectrometry
cultivar
quality groups
nitrogen
topic Agronomía, reproducción y protección de plantas
phloem metabolites
electrospray ionisation
mass spectrometry
cultivar
quality groups
nitrogen
dc.description.none.fl_txt_mv In a proof of concept study aimed at showing that metabolites in bread wheat (Triticum aestivum L. ssp. aestivum), phloem exudates have potential as biochemical markers for cultivar discrimination, Argentinean cultivars from three quality groups (groups 1, 2, and 3 of high, intermediate, and low quality, respectively) were grown under two nitrogen (N) availabilities and analysed for metabolic profile by electrospray ionisation mass spectrometry. Data as signal strengths of mass/charge (m/z) values binned to a resolution of 0.2 Daltons were subjected to principal component analysis and orthogonal projections to latent structures discriminant analysis. Certain bins were influential in discriminating groups taken in pairs and some were involved in separating all three groups. In high N availability, group 3 cultivars clustered away from the other cultivars, while group 1 cultivars clustered tightly together; group 2 cultivars were more scattered between group 1 and group 3 cultivars. In low N availability, the cultivars were not clustered as tightly; nonetheless, group 1 cultivars tended to cluster together and mainly separated from those of group 2. m/z values also showed potential for discrimination between N availability. In conclusion, phloem exudate metabolic profiles could provide biochemical markers for selection during breeding and for discerning the effects of N fertiliser application.
description In a proof of concept study aimed at showing that metabolites in bread wheat (Triticum aestivum L. ssp. aestivum), phloem exudates have potential as biochemical markers for cultivar discrimination, Argentinean cultivars from three quality groups (groups 1, 2, and 3 of high, intermediate, and low quality, respectively) were grown under two nitrogen (N) availabilities and analysed for metabolic profile by electrospray ionisation mass spectrometry. Data as signal strengths of mass/charge (m/z) values binned to a resolution of 0.2 Daltons were subjected to principal component analysis and orthogonal projections to latent structures discriminant analysis. Certain bins were influential in discriminating groups taken in pairs and some were involved in separating all three groups. In high N availability, group 3 cultivars clustered away from the other cultivars, while group 1 cultivars clustered tightly together; group 2 cultivars were more scattered between group 1 and group 3 cultivars. In low N availability, the cultivars were not clustered as tightly; nonetheless, group 1 cultivars tended to cluster together and mainly separated from those of group 2. m/z values also showed potential for discrimination between N availability. In conclusion, phloem exudate metabolic profiles could provide biochemical markers for selection during breeding and for discerning the effects of N fertiliser application.
publishDate 2018
dc.date.none.fl_str_mv 2018-04-10
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://digital.cic.gba.gob.ar/handle/11746/10143
url https://digital.cic.gba.gob.ar/handle/11746/10143
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.3390/agronomy8040045
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/4.0/
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:CIC Digital (CICBA)
instname:Comisión de Investigaciones Científicas de la Provincia de Buenos Aires
instacron:CICBA
reponame_str CIC Digital (CICBA)
collection CIC Digital (CICBA)
instname_str Comisión de Investigaciones Científicas de la Provincia de Buenos Aires
instacron_str CICBA
institution CICBA
repository.name.fl_str_mv CIC Digital (CICBA) - Comisión de Investigaciones Científicas de la Provincia de Buenos Aires
repository.mail.fl_str_mv marisa.degiusti@sedici.unlp.edu.ar
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