A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs

Autores
Hadji Rasouliha, Sheida; Barrientos, Laura Soledad; Anderegg, Linda; Klesty, Carina; Lorenz, Jessica; Chevallier, Lucie; Jagannathan, Vidhya; Rösch, Sarah; Leeb, Tosso
Año de publicación
2019
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Laryngeal paralysis (LP) is the inability to abduct the arytenoid cartilages during inspiration, resulting in a partial to complete airway obstruction and consequent respiratory distress. Different forms of LP with varying age of onset exist in dogs. Hereditary early onset forms were reported in several dog breeds. In most breeds, hereditary LP is associated with other neurologic pathologies. Using a genome-wide association study and haplotype analyses, we mapped a major genetic risk factor for an early onset LP in Miniature Bull Terriers to a ~1.3 Mb interval on chromosome 11. Whole genome sequencing of an affected Miniature Bull Terrier and comparison to 598 control genomes revealed a 36 bp insertion into exon 15 of the RAPGEF6 gene (c.1793_1794ins36). The imperfect genotype-phenotype correlation suggested a complex mode of inheritance with a major genetic risk factor involving a recessive risk allele. Homozygosity for the insertion was associated with a 10- to 17-fold increased risk for LP. The insertion allele was only found in Miniature Bull Terriers and Bull Terriers. It was absent from >1000 control dogs of other dog breeds. The insertion sequence contains a splice acceptor motif leading to aberrant splicing in transcripts originating from the mutant allele (r.1732_1780del). This leads to a frameshift and a premature stop codon, p.(Ile587ProfsTer5), removing 64% of the open reading frame. Our results suggest an important role of RAPGEF6 in laryngeal nerve function and provide new clues to its physiological significance.
Facultad de Ciencias Veterinarias
Instituto de Genética Veterinaria
Materia
Veterinaria
dogs
larynx
mammalian genomics
homozygosity
pets and companion animals
genome-wide association studies
breathing
variant genotypes
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by/4.0/
Repositorio
SEDICI (UNLP)
Institución
Universidad Nacional de La Plata
OAI Identificador
oai:sedici.unlp.edu.ar:10915/108016

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network_name_str SEDICI (UNLP)
spelling A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogsHadji Rasouliha, SheidaBarrientos, Laura SoledadAnderegg, LindaKlesty, CarinaLorenz, JessicaChevallier, LucieJagannathan, VidhyaRösch, SarahLeeb, TossoVeterinariadogslarynxmammalian genomicshomozygositypets and companion animalsgenome-wide association studiesbreathingvariant genotypesLaryngeal paralysis (LP) is the inability to abduct the arytenoid cartilages during inspiration, resulting in a partial to complete airway obstruction and consequent respiratory distress. Different forms of LP with varying age of onset exist in dogs. Hereditary early onset forms were reported in several dog breeds. In most breeds, hereditary LP is associated with other neurologic pathologies. Using a genome-wide association study and haplotype analyses, we mapped a major genetic risk factor for an early onset LP in Miniature Bull Terriers to a ~1.3 Mb interval on chromosome 11. Whole genome sequencing of an affected Miniature Bull Terrier and comparison to 598 control genomes revealed a 36 bp insertion into exon 15 of the <i>RAPGEF6</i> gene (c.1793_1794ins36). The imperfect genotype-phenotype correlation suggested a complex mode of inheritance with a major genetic risk factor involving a recessive risk allele. Homozygosity for the insertion was associated with a 10- to 17-fold increased risk for LP. The insertion allele was only found in Miniature Bull Terriers and Bull Terriers. It was absent from >1000 control dogs of other dog breeds. The insertion sequence contains a splice acceptor motif leading to aberrant splicing in transcripts originating from the mutant allele (r.1732_1780del). This leads to a frameshift and a premature stop codon, p.(Ile587ProfsTer5), removing 64% of the open reading frame. Our results suggest an important role of <i>RAPGEF6</i> in laryngeal nerve function and provide new clues to its physiological significance.Facultad de Ciencias VeterinariasInstituto de Genética Veterinaria2019info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionArticulohttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://sedici.unlp.edu.ar/handle/10915/108016enginfo:eu-repo/semantics/altIdentifier/url/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC6812752&blobtype=pdfinfo:eu-repo/semantics/altIdentifier/url/https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1008416info:eu-repo/semantics/altIdentifier/issn/1553-7404info:eu-repo/semantics/altIdentifier/pmid/31647804info:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pgen.1008416info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/4.0/Creative Commons Attribution 4.0 International (CC BY 4.0)reponame:SEDICI (UNLP)instname:Universidad Nacional de La Platainstacron:UNLP2025-09-29T11:23:52Zoai:sedici.unlp.edu.ar:10915/108016Institucionalhttp://sedici.unlp.edu.ar/Universidad públicaNo correspondehttp://sedici.unlp.edu.ar/oai/snrdalira@sedici.unlp.edu.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:13292025-09-29 11:23:52.829SEDICI (UNLP) - Universidad Nacional de La Platafalse
dc.title.none.fl_str_mv A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs
title A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs
spellingShingle A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs
Hadji Rasouliha, Sheida
Veterinaria
dogs
larynx
mammalian genomics
homozygosity
pets and companion animals
genome-wide association studies
breathing
variant genotypes
title_short A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs
title_full A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs
title_fullStr A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs
title_full_unstemmed A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs
title_sort A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs
dc.creator.none.fl_str_mv Hadji Rasouliha, Sheida
Barrientos, Laura Soledad
Anderegg, Linda
Klesty, Carina
Lorenz, Jessica
Chevallier, Lucie
Jagannathan, Vidhya
Rösch, Sarah
Leeb, Tosso
author Hadji Rasouliha, Sheida
author_facet Hadji Rasouliha, Sheida
Barrientos, Laura Soledad
Anderegg, Linda
Klesty, Carina
Lorenz, Jessica
Chevallier, Lucie
Jagannathan, Vidhya
Rösch, Sarah
Leeb, Tosso
author_role author
author2 Barrientos, Laura Soledad
Anderegg, Linda
Klesty, Carina
Lorenz, Jessica
Chevallier, Lucie
Jagannathan, Vidhya
Rösch, Sarah
Leeb, Tosso
author2_role author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Veterinaria
dogs
larynx
mammalian genomics
homozygosity
pets and companion animals
genome-wide association studies
breathing
variant genotypes
topic Veterinaria
dogs
larynx
mammalian genomics
homozygosity
pets and companion animals
genome-wide association studies
breathing
variant genotypes
dc.description.none.fl_txt_mv Laryngeal paralysis (LP) is the inability to abduct the arytenoid cartilages during inspiration, resulting in a partial to complete airway obstruction and consequent respiratory distress. Different forms of LP with varying age of onset exist in dogs. Hereditary early onset forms were reported in several dog breeds. In most breeds, hereditary LP is associated with other neurologic pathologies. Using a genome-wide association study and haplotype analyses, we mapped a major genetic risk factor for an early onset LP in Miniature Bull Terriers to a ~1.3 Mb interval on chromosome 11. Whole genome sequencing of an affected Miniature Bull Terrier and comparison to 598 control genomes revealed a 36 bp insertion into exon 15 of the <i>RAPGEF6</i> gene (c.1793_1794ins36). The imperfect genotype-phenotype correlation suggested a complex mode of inheritance with a major genetic risk factor involving a recessive risk allele. Homozygosity for the insertion was associated with a 10- to 17-fold increased risk for LP. The insertion allele was only found in Miniature Bull Terriers and Bull Terriers. It was absent from >1000 control dogs of other dog breeds. The insertion sequence contains a splice acceptor motif leading to aberrant splicing in transcripts originating from the mutant allele (r.1732_1780del). This leads to a frameshift and a premature stop codon, p.(Ile587ProfsTer5), removing 64% of the open reading frame. Our results suggest an important role of <i>RAPGEF6</i> in laryngeal nerve function and provide new clues to its physiological significance.
Facultad de Ciencias Veterinarias
Instituto de Genética Veterinaria
description Laryngeal paralysis (LP) is the inability to abduct the arytenoid cartilages during inspiration, resulting in a partial to complete airway obstruction and consequent respiratory distress. Different forms of LP with varying age of onset exist in dogs. Hereditary early onset forms were reported in several dog breeds. In most breeds, hereditary LP is associated with other neurologic pathologies. Using a genome-wide association study and haplotype analyses, we mapped a major genetic risk factor for an early onset LP in Miniature Bull Terriers to a ~1.3 Mb interval on chromosome 11. Whole genome sequencing of an affected Miniature Bull Terrier and comparison to 598 control genomes revealed a 36 bp insertion into exon 15 of the <i>RAPGEF6</i> gene (c.1793_1794ins36). The imperfect genotype-phenotype correlation suggested a complex mode of inheritance with a major genetic risk factor involving a recessive risk allele. Homozygosity for the insertion was associated with a 10- to 17-fold increased risk for LP. The insertion allele was only found in Miniature Bull Terriers and Bull Terriers. It was absent from >1000 control dogs of other dog breeds. The insertion sequence contains a splice acceptor motif leading to aberrant splicing in transcripts originating from the mutant allele (r.1732_1780del). This leads to a frameshift and a premature stop codon, p.(Ile587ProfsTer5), removing 64% of the open reading frame. Our results suggest an important role of <i>RAPGEF6</i> in laryngeal nerve function and provide new clues to its physiological significance.
publishDate 2019
dc.date.none.fl_str_mv 2019
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
Articulo
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dc.identifier.none.fl_str_mv http://sedici.unlp.edu.ar/handle/10915/108016
url http://sedici.unlp.edu.ar/handle/10915/108016
dc.language.none.fl_str_mv eng
language eng
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info:eu-repo/semantics/altIdentifier/url/https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1008416
info:eu-repo/semantics/altIdentifier/issn/1553-7404
info:eu-repo/semantics/altIdentifier/pmid/31647804
info:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pgen.1008416
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
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Creative Commons Attribution 4.0 International (CC BY 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/4.0/
Creative Commons Attribution 4.0 International (CC BY 4.0)
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repository.name.fl_str_mv SEDICI (UNLP) - Universidad Nacional de La Plata
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