A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs
- Autores
- Hadji Rasouliha, Sheida; Barrientos, Laura Soledad; Anderegg, Linda; Klesty, Carina; Lorenz, Jessica; Chevallier, Lucie; Jagannathan, Vidhya; Rösch, Sarah; Leeb, Tosso
- Año de publicación
- 2019
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Laryngeal paralysis (LP) is the inability to abduct the arytenoid cartilages during inspiration, resulting in a partial to complete airway obstruction and consequent respiratory distress. Different forms of LP with varying age of onset exist in dogs. Hereditary early onset forms were reported in several dog breeds. In most breeds, hereditary LP is associated with other neurologic pathologies. Using a genome-wide association study and haplotype analyses, we mapped a major genetic risk factor for an early onset LP in Miniature Bull Terriers to a ~1.3 Mb interval on chromosome 11. Whole genome sequencing of an affected Miniature Bull Terrier and comparison to 598 control genomes revealed a 36 bp insertion into exon 15 of the RAPGEF6 gene (c.1793_1794ins36). The imperfect genotype-phenotype correlation suggested a complex mode of inheritance with a major genetic risk factor involving a recessive risk allele. Homozygosity for the insertion was associated with a 10- to 17-fold increased risk for LP. The insertion allele was only found in Miniature Bull Terriers and Bull Terriers. It was absent from >1000 control dogs of other dog breeds. The insertion sequence contains a splice acceptor motif leading to aberrant splicing in transcripts originating from the mutant allele (r.1732_1780del). This leads to a frameshift and a premature stop codon, p.(Ile587ProfsTer5), removing 64% of the open reading frame. Our results suggest an important role of RAPGEF6 in laryngeal nerve function and provide new clues to its physiological significance.
Facultad de Ciencias Veterinarias
Instituto de Genética Veterinaria - Materia
-
Veterinaria
dogs
larynx
mammalian genomics
homozygosity
pets and companion animals
genome-wide association studies
breathing
variant genotypes - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- http://creativecommons.org/licenses/by/4.0/
- Repositorio
- Institución
- Universidad Nacional de La Plata
- OAI Identificador
- oai:sedici.unlp.edu.ar:10915/108016
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A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogsHadji Rasouliha, SheidaBarrientos, Laura SoledadAnderegg, LindaKlesty, CarinaLorenz, JessicaChevallier, LucieJagannathan, VidhyaRösch, SarahLeeb, TossoVeterinariadogslarynxmammalian genomicshomozygositypets and companion animalsgenome-wide association studiesbreathingvariant genotypesLaryngeal paralysis (LP) is the inability to abduct the arytenoid cartilages during inspiration, resulting in a partial to complete airway obstruction and consequent respiratory distress. Different forms of LP with varying age of onset exist in dogs. Hereditary early onset forms were reported in several dog breeds. In most breeds, hereditary LP is associated with other neurologic pathologies. Using a genome-wide association study and haplotype analyses, we mapped a major genetic risk factor for an early onset LP in Miniature Bull Terriers to a ~1.3 Mb interval on chromosome 11. Whole genome sequencing of an affected Miniature Bull Terrier and comparison to 598 control genomes revealed a 36 bp insertion into exon 15 of the <i>RAPGEF6</i> gene (c.1793_1794ins36). The imperfect genotype-phenotype correlation suggested a complex mode of inheritance with a major genetic risk factor involving a recessive risk allele. Homozygosity for the insertion was associated with a 10- to 17-fold increased risk for LP. The insertion allele was only found in Miniature Bull Terriers and Bull Terriers. It was absent from >1000 control dogs of other dog breeds. The insertion sequence contains a splice acceptor motif leading to aberrant splicing in transcripts originating from the mutant allele (r.1732_1780del). This leads to a frameshift and a premature stop codon, p.(Ile587ProfsTer5), removing 64% of the open reading frame. Our results suggest an important role of <i>RAPGEF6</i> in laryngeal nerve function and provide new clues to its physiological significance.Facultad de Ciencias VeterinariasInstituto de Genética Veterinaria2019info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionArticulohttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://sedici.unlp.edu.ar/handle/10915/108016enginfo:eu-repo/semantics/altIdentifier/url/http://europepmc.org/backend/ptpmcrender.fcgi?accid=PMC6812752&blobtype=pdfinfo:eu-repo/semantics/altIdentifier/url/https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1008416info:eu-repo/semantics/altIdentifier/issn/1553-7404info:eu-repo/semantics/altIdentifier/pmid/31647804info:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pgen.1008416info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/4.0/Creative Commons Attribution 4.0 International (CC BY 4.0)reponame:SEDICI (UNLP)instname:Universidad Nacional de La Platainstacron:UNLP2025-09-29T11:23:52Zoai:sedici.unlp.edu.ar:10915/108016Institucionalhttp://sedici.unlp.edu.ar/Universidad públicaNo correspondehttp://sedici.unlp.edu.ar/oai/snrdalira@sedici.unlp.edu.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:13292025-09-29 11:23:52.829SEDICI (UNLP) - Universidad Nacional de La Platafalse |
dc.title.none.fl_str_mv |
A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs |
title |
A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs |
spellingShingle |
A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs Hadji Rasouliha, Sheida Veterinaria dogs larynx mammalian genomics homozygosity pets and companion animals genome-wide association studies breathing variant genotypes |
title_short |
A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs |
title_full |
A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs |
title_fullStr |
A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs |
title_full_unstemmed |
A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs |
title_sort |
A <i>RAPGEF6</i> variant constitutes a major risk factor for laryngeal paralysis in dogs |
dc.creator.none.fl_str_mv |
Hadji Rasouliha, Sheida Barrientos, Laura Soledad Anderegg, Linda Klesty, Carina Lorenz, Jessica Chevallier, Lucie Jagannathan, Vidhya Rösch, Sarah Leeb, Tosso |
author |
Hadji Rasouliha, Sheida |
author_facet |
Hadji Rasouliha, Sheida Barrientos, Laura Soledad Anderegg, Linda Klesty, Carina Lorenz, Jessica Chevallier, Lucie Jagannathan, Vidhya Rösch, Sarah Leeb, Tosso |
author_role |
author |
author2 |
Barrientos, Laura Soledad Anderegg, Linda Klesty, Carina Lorenz, Jessica Chevallier, Lucie Jagannathan, Vidhya Rösch, Sarah Leeb, Tosso |
author2_role |
author author author author author author author author |
dc.subject.none.fl_str_mv |
Veterinaria dogs larynx mammalian genomics homozygosity pets and companion animals genome-wide association studies breathing variant genotypes |
topic |
Veterinaria dogs larynx mammalian genomics homozygosity pets and companion animals genome-wide association studies breathing variant genotypes |
dc.description.none.fl_txt_mv |
Laryngeal paralysis (LP) is the inability to abduct the arytenoid cartilages during inspiration, resulting in a partial to complete airway obstruction and consequent respiratory distress. Different forms of LP with varying age of onset exist in dogs. Hereditary early onset forms were reported in several dog breeds. In most breeds, hereditary LP is associated with other neurologic pathologies. Using a genome-wide association study and haplotype analyses, we mapped a major genetic risk factor for an early onset LP in Miniature Bull Terriers to a ~1.3 Mb interval on chromosome 11. Whole genome sequencing of an affected Miniature Bull Terrier and comparison to 598 control genomes revealed a 36 bp insertion into exon 15 of the <i>RAPGEF6</i> gene (c.1793_1794ins36). The imperfect genotype-phenotype correlation suggested a complex mode of inheritance with a major genetic risk factor involving a recessive risk allele. Homozygosity for the insertion was associated with a 10- to 17-fold increased risk for LP. The insertion allele was only found in Miniature Bull Terriers and Bull Terriers. It was absent from >1000 control dogs of other dog breeds. The insertion sequence contains a splice acceptor motif leading to aberrant splicing in transcripts originating from the mutant allele (r.1732_1780del). This leads to a frameshift and a premature stop codon, p.(Ile587ProfsTer5), removing 64% of the open reading frame. Our results suggest an important role of <i>RAPGEF6</i> in laryngeal nerve function and provide new clues to its physiological significance. Facultad de Ciencias Veterinarias Instituto de Genética Veterinaria |
description |
Laryngeal paralysis (LP) is the inability to abduct the arytenoid cartilages during inspiration, resulting in a partial to complete airway obstruction and consequent respiratory distress. Different forms of LP with varying age of onset exist in dogs. Hereditary early onset forms were reported in several dog breeds. In most breeds, hereditary LP is associated with other neurologic pathologies. Using a genome-wide association study and haplotype analyses, we mapped a major genetic risk factor for an early onset LP in Miniature Bull Terriers to a ~1.3 Mb interval on chromosome 11. Whole genome sequencing of an affected Miniature Bull Terrier and comparison to 598 control genomes revealed a 36 bp insertion into exon 15 of the <i>RAPGEF6</i> gene (c.1793_1794ins36). The imperfect genotype-phenotype correlation suggested a complex mode of inheritance with a major genetic risk factor involving a recessive risk allele. Homozygosity for the insertion was associated with a 10- to 17-fold increased risk for LP. The insertion allele was only found in Miniature Bull Terriers and Bull Terriers. It was absent from >1000 control dogs of other dog breeds. The insertion sequence contains a splice acceptor motif leading to aberrant splicing in transcripts originating from the mutant allele (r.1732_1780del). This leads to a frameshift and a premature stop codon, p.(Ile587ProfsTer5), removing 64% of the open reading frame. Our results suggest an important role of <i>RAPGEF6</i> in laryngeal nerve function and provide new clues to its physiological significance. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion Articulo http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
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article |
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publishedVersion |
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http://sedici.unlp.edu.ar/handle/10915/108016 |
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http://sedici.unlp.edu.ar/handle/10915/108016 |
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eng |
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eng |
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http://creativecommons.org/licenses/by/4.0/ Creative Commons Attribution 4.0 International (CC BY 4.0) |
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