Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert

Autores
Rasuk, María Cecilia; Fernández, Ana Beatriz; Kurth, Daniel; Contreras, Manuel; Novoa, Fernando; Poiré, Daniel Gustavo; Farias, María Eugenia
Año de publicación
2016
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
The Atacama Desert has extreme environmental conditions that allow the development of unique microbial communities. The present paper reports the bacterial diversity of microbial mats and sediments and its mineralogical components. Some physicochemical conditions of the water surrounding these ecosystems have also been studied trying to determine their influence on the diversity of these communities. In that way, mats and sediments distributed among different hypersaline lakes located in salt flats of the Atacama Desert were subjected to massive parallel sequencing of the V4 region of the 16S rRNA genes of Bacteria. A higher diversity in sediment than in mat samples have been found. Lakes that harbor microbial mats have higher salinity than lakes where mats are absent. Proteobacteria and/or Bacteroidetes are the major phyla represented in all samples. An interesting item is the finding of a low proportion or absence of Cyanobacteria sequences in the ecosystems studied, suggesting the possibility that other groups may be playing an essential role as primary producers in these extreme environments. Additionally, the large proportion of 16S rRNA gene sequences that could not be classified at the level of phylum indicates potential new phyla present in these ecosystems.
Centro de Investigaciones Geológicas
Materia
Geología
Microbial diversity
Atacama Desert
Mats
Sediments
Hypersaline lakes
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by/4.0/
Repositorio
SEDICI (UNLP)
Institución
Universidad Nacional de La Plata
OAI Identificador
oai:sedici.unlp.edu.ar:10915/139058

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spelling Bacterial Diversity in Microbial Mats and Sediments from the Atacama DesertRasuk, María CeciliaFernández, Ana BeatrizKurth, DanielContreras, ManuelNovoa, FernandoPoiré, Daniel GustavoFarias, María EugeniaGeologíaMicrobial diversityAtacama DesertMatsSedimentsHypersaline lakesThe Atacama Desert has extreme environmental conditions that allow the development of unique microbial communities. The present paper reports the bacterial diversity of microbial mats and sediments and its mineralogical components. Some physicochemical conditions of the water surrounding these ecosystems have also been studied trying to determine their influence on the diversity of these communities. In that way, mats and sediments distributed among different hypersaline lakes located in salt flats of the Atacama Desert were subjected to massive parallel sequencing of the V4 region of the 16S rRNA genes of Bacteria. A higher diversity in sediment than in mat samples have been found. Lakes that harbor microbial mats have higher salinity than lakes where mats are absent. Proteobacteria and/or Bacteroidetes are the major phyla represented in all samples. An interesting item is the finding of a low proportion or absence of Cyanobacteria sequences in the ecosystems studied, suggesting the possibility that other groups may be playing an essential role as primary producers in these extreme environments. Additionally, the large proportion of 16S rRNA gene sequences that could not be classified at the level of phylum indicates potential new phyla present in these ecosystems.Centro de Investigaciones Geológicas2016info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionArticulohttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdf44-56http://sedici.unlp.edu.ar/handle/10915/139058enginfo:eu-repo/semantics/altIdentifier/issn/1432-184xinfo:eu-repo/semantics/altIdentifier/issn/0095-3628info:eu-repo/semantics/altIdentifier/doi/10.1007/s00248-015-0649-9info:eu-repo/semantics/altIdentifier/pmid/26224164info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/4.0/Creative Commons Attribution 4.0 International (CC BY 4.0)reponame:SEDICI (UNLP)instname:Universidad Nacional de La Platainstacron:UNLP2025-09-03T11:04:03Zoai:sedici.unlp.edu.ar:10915/139058Institucionalhttp://sedici.unlp.edu.ar/Universidad públicaNo correspondehttp://sedici.unlp.edu.ar/oai/snrdalira@sedici.unlp.edu.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:13292025-09-03 11:04:03.609SEDICI (UNLP) - Universidad Nacional de La Platafalse
dc.title.none.fl_str_mv Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert
title Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert
spellingShingle Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert
Rasuk, María Cecilia
Geología
Microbial diversity
Atacama Desert
Mats
Sediments
Hypersaline lakes
title_short Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert
title_full Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert
title_fullStr Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert
title_full_unstemmed Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert
title_sort Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert
dc.creator.none.fl_str_mv Rasuk, María Cecilia
Fernández, Ana Beatriz
Kurth, Daniel
Contreras, Manuel
Novoa, Fernando
Poiré, Daniel Gustavo
Farias, María Eugenia
author Rasuk, María Cecilia
author_facet Rasuk, María Cecilia
Fernández, Ana Beatriz
Kurth, Daniel
Contreras, Manuel
Novoa, Fernando
Poiré, Daniel Gustavo
Farias, María Eugenia
author_role author
author2 Fernández, Ana Beatriz
Kurth, Daniel
Contreras, Manuel
Novoa, Fernando
Poiré, Daniel Gustavo
Farias, María Eugenia
author2_role author
author
author
author
author
author
dc.subject.none.fl_str_mv Geología
Microbial diversity
Atacama Desert
Mats
Sediments
Hypersaline lakes
topic Geología
Microbial diversity
Atacama Desert
Mats
Sediments
Hypersaline lakes
dc.description.none.fl_txt_mv The Atacama Desert has extreme environmental conditions that allow the development of unique microbial communities. The present paper reports the bacterial diversity of microbial mats and sediments and its mineralogical components. Some physicochemical conditions of the water surrounding these ecosystems have also been studied trying to determine their influence on the diversity of these communities. In that way, mats and sediments distributed among different hypersaline lakes located in salt flats of the Atacama Desert were subjected to massive parallel sequencing of the V4 region of the 16S rRNA genes of Bacteria. A higher diversity in sediment than in mat samples have been found. Lakes that harbor microbial mats have higher salinity than lakes where mats are absent. Proteobacteria and/or Bacteroidetes are the major phyla represented in all samples. An interesting item is the finding of a low proportion or absence of Cyanobacteria sequences in the ecosystems studied, suggesting the possibility that other groups may be playing an essential role as primary producers in these extreme environments. Additionally, the large proportion of 16S rRNA gene sequences that could not be classified at the level of phylum indicates potential new phyla present in these ecosystems.
Centro de Investigaciones Geológicas
description The Atacama Desert has extreme environmental conditions that allow the development of unique microbial communities. The present paper reports the bacterial diversity of microbial mats and sediments and its mineralogical components. Some physicochemical conditions of the water surrounding these ecosystems have also been studied trying to determine their influence on the diversity of these communities. In that way, mats and sediments distributed among different hypersaline lakes located in salt flats of the Atacama Desert were subjected to massive parallel sequencing of the V4 region of the 16S rRNA genes of Bacteria. A higher diversity in sediment than in mat samples have been found. Lakes that harbor microbial mats have higher salinity than lakes where mats are absent. Proteobacteria and/or Bacteroidetes are the major phyla represented in all samples. An interesting item is the finding of a low proportion or absence of Cyanobacteria sequences in the ecosystems studied, suggesting the possibility that other groups may be playing an essential role as primary producers in these extreme environments. Additionally, the large proportion of 16S rRNA gene sequences that could not be classified at the level of phylum indicates potential new phyla present in these ecosystems.
publishDate 2016
dc.date.none.fl_str_mv 2016
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
Articulo
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://sedici.unlp.edu.ar/handle/10915/139058
url http://sedici.unlp.edu.ar/handle/10915/139058
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/issn/1432-184x
info:eu-repo/semantics/altIdentifier/issn/0095-3628
info:eu-repo/semantics/altIdentifier/doi/10.1007/s00248-015-0649-9
info:eu-repo/semantics/altIdentifier/pmid/26224164
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by/4.0/
Creative Commons Attribution 4.0 International (CC BY 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/4.0/
Creative Commons Attribution 4.0 International (CC BY 4.0)
dc.format.none.fl_str_mv application/pdf
44-56
dc.source.none.fl_str_mv reponame:SEDICI (UNLP)
instname:Universidad Nacional de La Plata
instacron:UNLP
reponame_str SEDICI (UNLP)
collection SEDICI (UNLP)
instname_str Universidad Nacional de La Plata
instacron_str UNLP
institution UNLP
repository.name.fl_str_mv SEDICI (UNLP) - Universidad Nacional de La Plata
repository.mail.fl_str_mv alira@sedici.unlp.edu.ar
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