Gene discovery through genomic sequencing of Brucella abortus.

Autores
Sánchez, Daniel O.; Zandomeni, Rubén O.; Cravero, Silvio; Verdun, Ramiro E.; Pierrou, Ester; Faccio, Paula; Diaz, Gabriela; Lanzavecchia, Silvia; Agüero, Fernán; Frasch, Alberto C.C.; Andersson, Siv G. E.; Rossetti, Osvaldo; Grau, Oscar; Ugalde, Rodolfo A
Año de publicación
2001
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Brucella abortus is the etiological agent of brucellosis, a disease that affects bovines and human. We generated DNA random sequences from the genome of B. abortus strain 2308 in order to characterize molecular targets that might be useful for developing immunological or chemotherapeutic strategies against this pathogen. The partial sequencing of 1,899 clones allowed the identification of 1,199 genomic sequence surveys (GSSs) with high homology (BLAST expect value < 10(-5)) to sequences deposited in the GenBank databases. Among them, 925 represent putative novel genes for the Brucella genus. Out of 925 nonredundant GSSs, 470 were classified in 15 categories based on cellular function. Seven hundred GSSs showed no significant database matches and remain available for further studies in order to identify their function. A high number of GSSs with homology to Agrobacterium tumefaciens and Rhizobium meliloti proteins were observed, thus confirming their close phylogenetic relationship. Among them, several GSSs showed high similarity with genes related to nodule nitrogen fixation, synthesis of nod factors, nodulation protein symbiotic plasmid, and nodule bacteroid differentiation. We have also identified several B. abortus homologs of virulence and pathogenesis genes from other pathogens, including a homolog to both the Shda gene from Salmonella enterica serovar Typhimurium and the AidA-1 gene from Escherichia coli. Other GSSs displayed significant homologies to genes encoding components of the type III and type IV secretion machineries, suggesting that Brucella might also have an active type III secretion machinery.
Instituto de Biotecnologia y Biologia Molecular
Materia
Ciencias Naturales
Biología
Brucella abortus
Genes
Pathogens
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by/4.0/
Repositorio
SEDICI (UNLP)
Institución
Universidad Nacional de La Plata
OAI Identificador
oai:sedici.unlp.edu.ar:10915/123814

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network_name_str SEDICI (UNLP)
spelling Gene discovery through genomic sequencing of Brucella abortus.Sánchez, Daniel O.Zandomeni, Rubén O.Cravero, SilvioVerdun, Ramiro E.Pierrou, EsterFaccio, PaulaDiaz, GabrielaLanzavecchia, SilviaAgüero, FernánFrasch, Alberto C.C.Andersson, Siv G. E.Rossetti, OsvaldoGrau, OscarUgalde, Rodolfo ACiencias NaturalesBiologíaBrucella abortusGenesPathogensBrucella abortus is the etiological agent of brucellosis, a disease that affects bovines and human. We generated DNA random sequences from the genome of B. abortus strain 2308 in order to characterize molecular targets that might be useful for developing immunological or chemotherapeutic strategies against this pathogen. The partial sequencing of 1,899 clones allowed the identification of 1,199 genomic sequence surveys (GSSs) with high homology (BLAST expect value < 10(-5)) to sequences deposited in the GenBank databases. Among them, 925 represent putative novel genes for the Brucella genus. Out of 925 nonredundant GSSs, 470 were classified in 15 categories based on cellular function. Seven hundred GSSs showed no significant database matches and remain available for further studies in order to identify their function. A high number of GSSs with homology to Agrobacterium tumefaciens and Rhizobium meliloti proteins were observed, thus confirming their close phylogenetic relationship. Among them, several GSSs showed high similarity with genes related to nodule nitrogen fixation, synthesis of nod factors, nodulation protein symbiotic plasmid, and nodule bacteroid differentiation. We have also identified several B. abortus homologs of virulence and pathogenesis genes from other pathogens, including a homolog to both the Shda gene from Salmonella enterica serovar Typhimurium and the AidA-1 gene from Escherichia coli. Other GSSs displayed significant homologies to genes encoding components of the type III and type IV secretion machineries, suggesting that Brucella might also have an active type III secretion machinery.Instituto de Biotecnologia y Biologia Molecular2001info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionArticulohttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdf865-868http://sedici.unlp.edu.ar/handle/10915/123814enginfo:eu-repo/semantics/altIdentifier/issn/0019-9567info:eu-repo/semantics/altIdentifier/issn/1098-5522info:eu-repo/semantics/altIdentifier/pmid/11159979info:eu-repo/semantics/altIdentifier/doi/10.1128/iai.69.2.865-868.2001info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/4.0/Creative Commons Attribution 4.0 International (CC BY 4.0)reponame:SEDICI (UNLP)instname:Universidad Nacional de La Platainstacron:UNLP2025-12-23T11:31:35Zoai:sedici.unlp.edu.ar:10915/123814Institucionalhttp://sedici.unlp.edu.ar/Universidad públicaNo correspondehttp://sedici.unlp.edu.ar/oai/snrdalira@sedici.unlp.edu.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:13292025-12-23 11:31:35.879SEDICI (UNLP) - Universidad Nacional de La Platafalse
dc.title.none.fl_str_mv Gene discovery through genomic sequencing of Brucella abortus.
title Gene discovery through genomic sequencing of Brucella abortus.
spellingShingle Gene discovery through genomic sequencing of Brucella abortus.
Sánchez, Daniel O.
Ciencias Naturales
Biología
Brucella abortus
Genes
Pathogens
title_short Gene discovery through genomic sequencing of Brucella abortus.
title_full Gene discovery through genomic sequencing of Brucella abortus.
title_fullStr Gene discovery through genomic sequencing of Brucella abortus.
title_full_unstemmed Gene discovery through genomic sequencing of Brucella abortus.
title_sort Gene discovery through genomic sequencing of Brucella abortus.
dc.creator.none.fl_str_mv Sánchez, Daniel O.
Zandomeni, Rubén O.
Cravero, Silvio
Verdun, Ramiro E.
Pierrou, Ester
Faccio, Paula
Diaz, Gabriela
Lanzavecchia, Silvia
Agüero, Fernán
Frasch, Alberto C.C.
Andersson, Siv G. E.
Rossetti, Osvaldo
Grau, Oscar
Ugalde, Rodolfo A
author Sánchez, Daniel O.
author_facet Sánchez, Daniel O.
Zandomeni, Rubén O.
Cravero, Silvio
Verdun, Ramiro E.
Pierrou, Ester
Faccio, Paula
Diaz, Gabriela
Lanzavecchia, Silvia
Agüero, Fernán
Frasch, Alberto C.C.
Andersson, Siv G. E.
Rossetti, Osvaldo
Grau, Oscar
Ugalde, Rodolfo A
author_role author
author2 Zandomeni, Rubén O.
Cravero, Silvio
Verdun, Ramiro E.
Pierrou, Ester
Faccio, Paula
Diaz, Gabriela
Lanzavecchia, Silvia
Agüero, Fernán
Frasch, Alberto C.C.
Andersson, Siv G. E.
Rossetti, Osvaldo
Grau, Oscar
Ugalde, Rodolfo A
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Ciencias Naturales
Biología
Brucella abortus
Genes
Pathogens
topic Ciencias Naturales
Biología
Brucella abortus
Genes
Pathogens
dc.description.none.fl_txt_mv Brucella abortus is the etiological agent of brucellosis, a disease that affects bovines and human. We generated DNA random sequences from the genome of B. abortus strain 2308 in order to characterize molecular targets that might be useful for developing immunological or chemotherapeutic strategies against this pathogen. The partial sequencing of 1,899 clones allowed the identification of 1,199 genomic sequence surveys (GSSs) with high homology (BLAST expect value < 10(-5)) to sequences deposited in the GenBank databases. Among them, 925 represent putative novel genes for the Brucella genus. Out of 925 nonredundant GSSs, 470 were classified in 15 categories based on cellular function. Seven hundred GSSs showed no significant database matches and remain available for further studies in order to identify their function. A high number of GSSs with homology to Agrobacterium tumefaciens and Rhizobium meliloti proteins were observed, thus confirming their close phylogenetic relationship. Among them, several GSSs showed high similarity with genes related to nodule nitrogen fixation, synthesis of nod factors, nodulation protein symbiotic plasmid, and nodule bacteroid differentiation. We have also identified several B. abortus homologs of virulence and pathogenesis genes from other pathogens, including a homolog to both the Shda gene from Salmonella enterica serovar Typhimurium and the AidA-1 gene from Escherichia coli. Other GSSs displayed significant homologies to genes encoding components of the type III and type IV secretion machineries, suggesting that Brucella might also have an active type III secretion machinery.
Instituto de Biotecnologia y Biologia Molecular
description Brucella abortus is the etiological agent of brucellosis, a disease that affects bovines and human. We generated DNA random sequences from the genome of B. abortus strain 2308 in order to characterize molecular targets that might be useful for developing immunological or chemotherapeutic strategies against this pathogen. The partial sequencing of 1,899 clones allowed the identification of 1,199 genomic sequence surveys (GSSs) with high homology (BLAST expect value < 10(-5)) to sequences deposited in the GenBank databases. Among them, 925 represent putative novel genes for the Brucella genus. Out of 925 nonredundant GSSs, 470 were classified in 15 categories based on cellular function. Seven hundred GSSs showed no significant database matches and remain available for further studies in order to identify their function. A high number of GSSs with homology to Agrobacterium tumefaciens and Rhizobium meliloti proteins were observed, thus confirming their close phylogenetic relationship. Among them, several GSSs showed high similarity with genes related to nodule nitrogen fixation, synthesis of nod factors, nodulation protein symbiotic plasmid, and nodule bacteroid differentiation. We have also identified several B. abortus homologs of virulence and pathogenesis genes from other pathogens, including a homolog to both the Shda gene from Salmonella enterica serovar Typhimurium and the AidA-1 gene from Escherichia coli. Other GSSs displayed significant homologies to genes encoding components of the type III and type IV secretion machineries, suggesting that Brucella might also have an active type III secretion machinery.
publishDate 2001
dc.date.none.fl_str_mv 2001
dc.type.none.fl_str_mv info:eu-repo/semantics/article
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Articulo
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info:eu-repo/semantics/altIdentifier/issn/1098-5522
info:eu-repo/semantics/altIdentifier/pmid/11159979
info:eu-repo/semantics/altIdentifier/doi/10.1128/iai.69.2.865-868.2001
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by/4.0/
Creative Commons Attribution 4.0 International (CC BY 4.0)
eu_rights_str_mv openAccess
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