The first caprine rotavirus detected in Argentina displays genomic features resembling virus strains infecting members of the Bovidae and Camelidae

Autores
Louge Uriarte, Enrique Leopoldo; Badaracco, Alejandra; Matthijnssens, Jelle; Zeller, Mark; Heylen, Elizabeth; Manazza, Jorge Alberto; Miño, Samuel; Ranst, Marc Van; Odeon, Anselmo Carlos; Parreño, Gladys Viviana
Año de publicación
2014
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Rotavirus group A (RVA) is a major cause of diarrhea in humans and young animals including small ruminants. The purpose of this study was to identify RVA in dairy goat kids, and to characterize the complete genomic constellation and genetic relatedness with other RVA strains. Four out of twenty fecal samples from diarrheic and non-diarrheic goat kids were positive for RVA by ELISA. A representative sample was selected for further genome analyses. The RVA strain RVA/Goat-wt/ARG/0040/2011/G8P[1] displayed the following genomic constellation: G8-P[1]-I2-R5-C2-M2-A3-N2-T6-E12-H3, reminiscent to guanaco and other bovine-like RVA strains detected in Argentina. Phylogenetic analyses revealed that most of the genome segments had a rather close relatedness with RVA strains typically obtained from cattle, sheep, South American camelids and goats. Interestingly, strain 0040 possessed the R5 and E12 genotypes which have up to date only been found in different animal species from Argentina. Overall, these findings suggest that strain 0040 could represent a typical goat RVA genome constellation similar to those previously found in other animal species within the order Artiodactyla.
EEA Balcarce
Fil: Louge Uriarte, Enrique Leopoldo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Balcarce. Area de Producción Animal; Argentina
Fil: Badaracco, Alejandra. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Virología; Argentina
Fil: Matthijnssens, Jelle. University of Leuven. Department of Microbiology and Immunology. Rega Institute for Medical Research. Laboratory of Viral Metagenomics; Bélgica.
Fil: Zeller, Mark. University of Leuven. Department of Microbiology and Immunology. Rega Institute for Medical Research. Laboratory of Viral Metagenomics; Bélgica
Fil: Heylen, Elisabeth. University of Leuven. Department of Microbiology and Immunology. Rega Institute for Medical Research. Laboratory of Viral Metagenomics; Bélgica
Fil: Manazza, Jorge Alberto. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Balcarce; Argentina
Fil: Miño, Samuel. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Virología; Argentina
Fil: Ranst, Marc Van. University of Leuven. Department of Microbiology and Immunology. Rega Institute for Medical Research. Laboratory of Viral Metagenomics; Bélgica
Fil: Odeon, Anselmo Carlos. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Balcarce; Argentina
Fil: Parreño, Gladys Viviana. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Virología; Argentina
Fuente
Veterinary Microbiology 171 (1–2) : 189-197 (June 2014)
Materia
Caprinos
Enfermedades de los Animales
Rotavirus
Genómica
Identificación
Goats
Animal Diseases
Genomics
Identification
Argentina
Nivel de accesibilidad
acceso restringido
Condiciones de uso
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
oai:localhost:20.500.12123/4824
Acceder
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oai_identifier_str oai:localhost:20.500.12123/4824
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network_name_str INTA Digital (INTA)
spelling The first caprine rotavirus detected in Argentina displays genomic features resembling virus strains infecting members of the Bovidae and CamelidaeLouge Uriarte, Enrique LeopoldoBadaracco, AlejandraMatthijnssens, JelleZeller, MarkHeylen, ElizabethManazza, Jorge AlbertoMiño, SamuelRanst, Marc VanOdeon, Anselmo CarlosParreño, Gladys VivianaCaprinosEnfermedades de los AnimalesRotavirusGenómicaIdentificaciónGoatsAnimal DiseasesGenomicsIdentificationArgentinaRotavirus group A (RVA) is a major cause of diarrhea in humans and young animals including small ruminants. The purpose of this study was to identify RVA in dairy goat kids, and to characterize the complete genomic constellation and genetic relatedness with other RVA strains. Four out of twenty fecal samples from diarrheic and non-diarrheic goat kids were positive for RVA by ELISA. A representative sample was selected for further genome analyses. The RVA strain RVA/Goat-wt/ARG/0040/2011/G8P[1] displayed the following genomic constellation: G8-P[1]-I2-R5-C2-M2-A3-N2-T6-E12-H3, reminiscent to guanaco and other bovine-like RVA strains detected in Argentina. Phylogenetic analyses revealed that most of the genome segments had a rather close relatedness with RVA strains typically obtained from cattle, sheep, South American camelids and goats. Interestingly, strain 0040 possessed the R5 and E12 genotypes which have up to date only been found in different animal species from Argentina. Overall, these findings suggest that strain 0040 could represent a typical goat RVA genome constellation similar to those previously found in other animal species within the order Artiodactyla.EEA BalcarceFil: Louge Uriarte, Enrique Leopoldo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Balcarce. Area de Producción Animal; ArgentinaFil: Badaracco, Alejandra. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Virología; ArgentinaFil: Matthijnssens, Jelle. University of Leuven. Department of Microbiology and Immunology. Rega Institute for Medical Research. Laboratory of Viral Metagenomics; Bélgica.Fil: Zeller, Mark. University of Leuven. Department of Microbiology and Immunology. Rega Institute for Medical Research. Laboratory of Viral Metagenomics; BélgicaFil: Heylen, Elisabeth. University of Leuven. Department of Microbiology and Immunology. Rega Institute for Medical Research. Laboratory of Viral Metagenomics; BélgicaFil: Manazza, Jorge Alberto. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Balcarce; ArgentinaFil: Miño, Samuel. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Virología; ArgentinaFil: Ranst, Marc Van. University of Leuven. Department of Microbiology and Immunology. Rega Institute for Medical Research. Laboratory of Viral Metagenomics; BélgicaFil: Odeon, Anselmo Carlos. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Balcarce; ArgentinaFil: Parreño, Gladys Viviana. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Virología; ArgentinaElsevier2019-04-05T12:21:19Z2019-04-05T12:21:19Z2014-05-25info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttps://www.sciencedirect.com/science/article/pii/S0378113514001631http://hdl.handle.net/20.500.12123/48240378-1135https://doi.org/10.1016/j.vetmic.2014.03.013Veterinary Microbiology 171 (1–2) : 189-197 (June 2014)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repo/semantics/restrictedAccess2025-10-16T09:29:29Zoai:localhost:20.500.12123/4824instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-10-16 09:29:29.841INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv The first caprine rotavirus detected in Argentina displays genomic features resembling virus strains infecting members of the Bovidae and Camelidae
title The first caprine rotavirus detected in Argentina displays genomic features resembling virus strains infecting members of the Bovidae and Camelidae
spellingShingle The first caprine rotavirus detected in Argentina displays genomic features resembling virus strains infecting members of the Bovidae and Camelidae
Louge Uriarte, Enrique Leopoldo
Caprinos
Enfermedades de los Animales
Rotavirus
Genómica
Identificación
Goats
Animal Diseases
Genomics
Identification
Argentina
title_short The first caprine rotavirus detected in Argentina displays genomic features resembling virus strains infecting members of the Bovidae and Camelidae
title_full The first caprine rotavirus detected in Argentina displays genomic features resembling virus strains infecting members of the Bovidae and Camelidae
title_fullStr The first caprine rotavirus detected in Argentina displays genomic features resembling virus strains infecting members of the Bovidae and Camelidae
title_full_unstemmed The first caprine rotavirus detected in Argentina displays genomic features resembling virus strains infecting members of the Bovidae and Camelidae
title_sort The first caprine rotavirus detected in Argentina displays genomic features resembling virus strains infecting members of the Bovidae and Camelidae
dc.creator.none.fl_str_mv Louge Uriarte, Enrique Leopoldo
Badaracco, Alejandra
Matthijnssens, Jelle
Zeller, Mark
Heylen, Elizabeth
Manazza, Jorge Alberto
Miño, Samuel
Ranst, Marc Van
Odeon, Anselmo Carlos
Parreño, Gladys Viviana
author Louge Uriarte, Enrique Leopoldo
author_facet Louge Uriarte, Enrique Leopoldo
Badaracco, Alejandra
Matthijnssens, Jelle
Zeller, Mark
Heylen, Elizabeth
Manazza, Jorge Alberto
Miño, Samuel
Ranst, Marc Van
Odeon, Anselmo Carlos
Parreño, Gladys Viviana
author_role author
author2 Badaracco, Alejandra
Matthijnssens, Jelle
Zeller, Mark
Heylen, Elizabeth
Manazza, Jorge Alberto
Miño, Samuel
Ranst, Marc Van
Odeon, Anselmo Carlos
Parreño, Gladys Viviana
author2_role author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Caprinos
Enfermedades de los Animales
Rotavirus
Genómica
Identificación
Goats
Animal Diseases
Genomics
Identification
Argentina
topic Caprinos
Enfermedades de los Animales
Rotavirus
Genómica
Identificación
Goats
Animal Diseases
Genomics
Identification
Argentina
dc.description.none.fl_txt_mv Rotavirus group A (RVA) is a major cause of diarrhea in humans and young animals including small ruminants. The purpose of this study was to identify RVA in dairy goat kids, and to characterize the complete genomic constellation and genetic relatedness with other RVA strains. Four out of twenty fecal samples from diarrheic and non-diarrheic goat kids were positive for RVA by ELISA. A representative sample was selected for further genome analyses. The RVA strain RVA/Goat-wt/ARG/0040/2011/G8P[1] displayed the following genomic constellation: G8-P[1]-I2-R5-C2-M2-A3-N2-T6-E12-H3, reminiscent to guanaco and other bovine-like RVA strains detected in Argentina. Phylogenetic analyses revealed that most of the genome segments had a rather close relatedness with RVA strains typically obtained from cattle, sheep, South American camelids and goats. Interestingly, strain 0040 possessed the R5 and E12 genotypes which have up to date only been found in different animal species from Argentina. Overall, these findings suggest that strain 0040 could represent a typical goat RVA genome constellation similar to those previously found in other animal species within the order Artiodactyla.
EEA Balcarce
Fil: Louge Uriarte, Enrique Leopoldo. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Balcarce. Area de Producción Animal; Argentina
Fil: Badaracco, Alejandra. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Virología; Argentina
Fil: Matthijnssens, Jelle. University of Leuven. Department of Microbiology and Immunology. Rega Institute for Medical Research. Laboratory of Viral Metagenomics; Bélgica.
Fil: Zeller, Mark. University of Leuven. Department of Microbiology and Immunology. Rega Institute for Medical Research. Laboratory of Viral Metagenomics; Bélgica
Fil: Heylen, Elisabeth. University of Leuven. Department of Microbiology and Immunology. Rega Institute for Medical Research. Laboratory of Viral Metagenomics; Bélgica
Fil: Manazza, Jorge Alberto. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Balcarce; Argentina
Fil: Miño, Samuel. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Virología; Argentina
Fil: Ranst, Marc Van. University of Leuven. Department of Microbiology and Immunology. Rega Institute for Medical Research. Laboratory of Viral Metagenomics; Bélgica
Fil: Odeon, Anselmo Carlos. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Balcarce; Argentina
Fil: Parreño, Gladys Viviana. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Virología; Argentina
description Rotavirus group A (RVA) is a major cause of diarrhea in humans and young animals including small ruminants. The purpose of this study was to identify RVA in dairy goat kids, and to characterize the complete genomic constellation and genetic relatedness with other RVA strains. Four out of twenty fecal samples from diarrheic and non-diarrheic goat kids were positive for RVA by ELISA. A representative sample was selected for further genome analyses. The RVA strain RVA/Goat-wt/ARG/0040/2011/G8P[1] displayed the following genomic constellation: G8-P[1]-I2-R5-C2-M2-A3-N2-T6-E12-H3, reminiscent to guanaco and other bovine-like RVA strains detected in Argentina. Phylogenetic analyses revealed that most of the genome segments had a rather close relatedness with RVA strains typically obtained from cattle, sheep, South American camelids and goats. Interestingly, strain 0040 possessed the R5 and E12 genotypes which have up to date only been found in different animal species from Argentina. Overall, these findings suggest that strain 0040 could represent a typical goat RVA genome constellation similar to those previously found in other animal species within the order Artiodactyla.
publishDate 2014
dc.date.none.fl_str_mv 2014-05-25
2019-04-05T12:21:19Z
2019-04-05T12:21:19Z
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://www.sciencedirect.com/science/article/pii/S0378113514001631
http://hdl.handle.net/20.500.12123/4824
0378-1135
https://doi.org/10.1016/j.vetmic.2014.03.013
url https://www.sciencedirect.com/science/article/pii/S0378113514001631
http://hdl.handle.net/20.500.12123/4824
https://doi.org/10.1016/j.vetmic.2014.03.013
identifier_str_mv 0378-1135
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/restrictedAccess
eu_rights_str_mv restrictedAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv Veterinary Microbiology 171 (1–2) : 189-197 (June 2014)
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
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score 12.706009

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