No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Gro...

Autores
Rafi, Nitha; Dominguez, Matías; Okello, Paul N.; Mathew, Febina Merlin
Año de publicación
2024
Idioma
inglés
Tipo de recurso
artículo
Estado
versión aceptada
Descripción
Seedling diseases and root rot, caused by species of Fusarium, can limit soybean (Glycine max L.) production in the United States. Currently, there are few commercially available cultivars resistant to Fusarium. This study was conducted to assess the resistance of soybean maturity group (MG) accessions from 0 and I to Fusarium proliferatum, F. sporotrichioides, and F. subglutinans, as well as to identify common quantitative trait loci (QTL) for resistance to these pathogens, in addition to F. graminearum, using a genome-wide association study (GWAS). A total of 155, 91, and 48 accessions from the USDA soybean germplasm collection from maturity groups 0 and I were screened with a single isolate each of F. proliferatum, F. sporotrichioides, and F. subglutinans, respectively, using the inoculum layer inoculation method in the greenhouse. The disease severity was assessed 21 days post-inoculation and analyzed using non-parametric statistics to determine the relative treatment effects (RTE). Eleven and seven accessions showed significantly lower RTEs when inoculated with F. proliferatum and F. subglutinans, respectively, compared to the susceptible cultivar 'Williams 82'. One accession was significantly less susceptible to both F. proliferatum and F. subglutinans. The GWAS conducted with 41,985 single-nucleotide markers identified one QTL associated with resistance to both F. proliferatum and F. sporotrichioides, as well as another QTL for resistance to both F. subglutinans and F. graminearum. However, no common QTLs were identified for the four pathogens. The USDA accessions and QTLs identified in this study can be utilized to selectively breed resistance to multiple species of Fusarium.
EEA Pergamino
Fil: Rafi, Nitha. North Dakota State University. Plant Pathology; Estados Unidos
Fil: Dominguez, Matías. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Sector Girasol; Argentina
Fil: Okello, Paul N. South Dakota State University. Agronomy. Horticulture and Plant Science; Estados Unidos
Fil: Mathew, Febina Merlin. North Dakota State University. Plant Pathology; Estados Unidos
Fuente
Plant Disease 108 : 38640427. (April 2024)
Materia
Enfermedades de las Plantas
Soja
Resistencia a la Enfermedad
Hongos
Plant Diseases
Soybeans
Fusarium
Fusarium proliferatum
Fusarium sporotrichioides
Gibberella fujikuroi
Disease Resistance
Fungi
Nivel de accesibilidad
acceso restringido
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
oai:localhost:20.500.12123/17671
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oai_identifier_str oai:localhost:20.500.12123/17671
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network_name_str INTA Digital (INTA)
spelling No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association MappingRafi, NithaDominguez, MatíasOkello, Paul N.Mathew, Febina MerlinEnfermedades de las PlantasSojaResistencia a la EnfermedadHongosPlant DiseasesSoybeansFusariumFusarium proliferatumFusarium sporotrichioidesGibberella fujikuroiDisease ResistanceFungiSeedling diseases and root rot, caused by species of Fusarium, can limit soybean (Glycine max L.) production in the United States. Currently, there are few commercially available cultivars resistant to Fusarium. This study was conducted to assess the resistance of soybean maturity group (MG) accessions from 0 and I to Fusarium proliferatum, F. sporotrichioides, and F. subglutinans, as well as to identify common quantitative trait loci (QTL) for resistance to these pathogens, in addition to F. graminearum, using a genome-wide association study (GWAS). A total of 155, 91, and 48 accessions from the USDA soybean germplasm collection from maturity groups 0 and I were screened with a single isolate each of F. proliferatum, F. sporotrichioides, and F. subglutinans, respectively, using the inoculum layer inoculation method in the greenhouse. The disease severity was assessed 21 days post-inoculation and analyzed using non-parametric statistics to determine the relative treatment effects (RTE). Eleven and seven accessions showed significantly lower RTEs when inoculated with F. proliferatum and F. subglutinans, respectively, compared to the susceptible cultivar 'Williams 82'. One accession was significantly less susceptible to both F. proliferatum and F. subglutinans. The GWAS conducted with 41,985 single-nucleotide markers identified one QTL associated with resistance to both F. proliferatum and F. sporotrichioides, as well as another QTL for resistance to both F. subglutinans and F. graminearum. However, no common QTLs were identified for the four pathogens. The USDA accessions and QTLs identified in this study can be utilized to selectively breed resistance to multiple species of Fusarium.EEA PergaminoFil: Rafi, Nitha. North Dakota State University. Plant Pathology; Estados UnidosFil: Dominguez, Matías. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Sector Girasol; ArgentinaFil: Okello, Paul N. South Dakota State University. Agronomy. Horticulture and Plant Science; Estados UnidosFil: Mathew, Febina Merlin. North Dakota State University. Plant Pathology; Estados UnidosThe American Phytopathological Societyinfo:eu-repo/date/embargoEnd/2025-05-082024-05-08T16:31:19Z2024-05-08T16:31:19Z2024-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/acceptedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://hdl.handle.net/20.500.12123/17671https://apsjournals.apsnet.org/doi/pdf/10.1094/PDIS-02-24-0477-RE0191-29171943-7692 (online)https://doi.org/10.1094/PDIS-02-24-0477-REPlant Disease 108 : 38640427. (April 2024)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repo/semantics/restrictedAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)2025-10-23T11:18:49Zoai:localhost:20.500.12123/17671instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-10-23 11:18:50.039INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
title No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
spellingShingle No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
Rafi, Nitha
Enfermedades de las Plantas
Soja
Resistencia a la Enfermedad
Hongos
Plant Diseases
Soybeans
Fusarium
Fusarium proliferatum
Fusarium sporotrichioides
Gibberella fujikuroi
Disease Resistance
Fungi
title_short No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
title_full No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
title_fullStr No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
title_full_unstemmed No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
title_sort No Common Candidate Genes for Resistance to Fusarium graminearum, F. proliferatum, F. sporotrichioides, and F. subglutanins in Soybean (Glycine max L.) Accessions from Maturity Groups 0 and I: Findings from Genome-Wide Association Mapping
dc.creator.none.fl_str_mv Rafi, Nitha
Dominguez, Matías
Okello, Paul N.
Mathew, Febina Merlin
author Rafi, Nitha
author_facet Rafi, Nitha
Dominguez, Matías
Okello, Paul N.
Mathew, Febina Merlin
author_role author
author2 Dominguez, Matías
Okello, Paul N.
Mathew, Febina Merlin
author2_role author
author
author
dc.subject.none.fl_str_mv Enfermedades de las Plantas
Soja
Resistencia a la Enfermedad
Hongos
Plant Diseases
Soybeans
Fusarium
Fusarium proliferatum
Fusarium sporotrichioides
Gibberella fujikuroi
Disease Resistance
Fungi
topic Enfermedades de las Plantas
Soja
Resistencia a la Enfermedad
Hongos
Plant Diseases
Soybeans
Fusarium
Fusarium proliferatum
Fusarium sporotrichioides
Gibberella fujikuroi
Disease Resistance
Fungi
dc.description.none.fl_txt_mv Seedling diseases and root rot, caused by species of Fusarium, can limit soybean (Glycine max L.) production in the United States. Currently, there are few commercially available cultivars resistant to Fusarium. This study was conducted to assess the resistance of soybean maturity group (MG) accessions from 0 and I to Fusarium proliferatum, F. sporotrichioides, and F. subglutinans, as well as to identify common quantitative trait loci (QTL) for resistance to these pathogens, in addition to F. graminearum, using a genome-wide association study (GWAS). A total of 155, 91, and 48 accessions from the USDA soybean germplasm collection from maturity groups 0 and I were screened with a single isolate each of F. proliferatum, F. sporotrichioides, and F. subglutinans, respectively, using the inoculum layer inoculation method in the greenhouse. The disease severity was assessed 21 days post-inoculation and analyzed using non-parametric statistics to determine the relative treatment effects (RTE). Eleven and seven accessions showed significantly lower RTEs when inoculated with F. proliferatum and F. subglutinans, respectively, compared to the susceptible cultivar 'Williams 82'. One accession was significantly less susceptible to both F. proliferatum and F. subglutinans. The GWAS conducted with 41,985 single-nucleotide markers identified one QTL associated with resistance to both F. proliferatum and F. sporotrichioides, as well as another QTL for resistance to both F. subglutinans and F. graminearum. However, no common QTLs were identified for the four pathogens. The USDA accessions and QTLs identified in this study can be utilized to selectively breed resistance to multiple species of Fusarium.
EEA Pergamino
Fil: Rafi, Nitha. North Dakota State University. Plant Pathology; Estados Unidos
Fil: Dominguez, Matías. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Pergamino. Sector Girasol; Argentina
Fil: Okello, Paul N. South Dakota State University. Agronomy. Horticulture and Plant Science; Estados Unidos
Fil: Mathew, Febina Merlin. North Dakota State University. Plant Pathology; Estados Unidos
description Seedling diseases and root rot, caused by species of Fusarium, can limit soybean (Glycine max L.) production in the United States. Currently, there are few commercially available cultivars resistant to Fusarium. This study was conducted to assess the resistance of soybean maturity group (MG) accessions from 0 and I to Fusarium proliferatum, F. sporotrichioides, and F. subglutinans, as well as to identify common quantitative trait loci (QTL) for resistance to these pathogens, in addition to F. graminearum, using a genome-wide association study (GWAS). A total of 155, 91, and 48 accessions from the USDA soybean germplasm collection from maturity groups 0 and I were screened with a single isolate each of F. proliferatum, F. sporotrichioides, and F. subglutinans, respectively, using the inoculum layer inoculation method in the greenhouse. The disease severity was assessed 21 days post-inoculation and analyzed using non-parametric statistics to determine the relative treatment effects (RTE). Eleven and seven accessions showed significantly lower RTEs when inoculated with F. proliferatum and F. subglutinans, respectively, compared to the susceptible cultivar 'Williams 82'. One accession was significantly less susceptible to both F. proliferatum and F. subglutinans. The GWAS conducted with 41,985 single-nucleotide markers identified one QTL associated with resistance to both F. proliferatum and F. sporotrichioides, as well as another QTL for resistance to both F. subglutinans and F. graminearum. However, no common QTLs were identified for the four pathogens. The USDA accessions and QTLs identified in this study can be utilized to selectively breed resistance to multiple species of Fusarium.
publishDate 2024
dc.date.none.fl_str_mv 2024-05-08T16:31:19Z
2024-05-08T16:31:19Z
2024-04
info:eu-repo/date/embargoEnd/2025-05-08
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/acceptedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str acceptedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12123/17671
https://apsjournals.apsnet.org/doi/pdf/10.1094/PDIS-02-24-0477-RE
0191-2917
1943-7692 (online)
https://doi.org/10.1094/PDIS-02-24-0477-RE
url http://hdl.handle.net/20.500.12123/17671
https://apsjournals.apsnet.org/doi/pdf/10.1094/PDIS-02-24-0477-RE
https://doi.org/10.1094/PDIS-02-24-0477-RE
identifier_str_mv 0191-2917
1943-7692 (online)
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/restrictedAccess
http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
eu_rights_str_mv restrictedAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv The American Phytopathological Society
publisher.none.fl_str_mv The American Phytopathological Society
dc.source.none.fl_str_mv Plant Disease 108 : 38640427. (April 2024)
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
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