Dataset of the transcribed 45S ribosomal RNA sequence of the tree crop “yerba mate”

Autores
Aguilera, Patricia Mabel; Debat, Humberto Julio; Grabiele, Mauro
Año de publicación
2017
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
This contribution contains data related to the research article entitled “The 18S-25S ribosomal RNA unit of yerba mate (Ilex paraguariensis A. St.-Hil.)” (Aguilera et al., 2016) [1]. Through a bioinformatic approach involving NGS data, we provide information of the transcribed 45S ribosomal RNA (rRNA) sequence of yerba mate, the first reference for the Ilex L. genus. This dataset (Supplementary file 1) comprises information regarding the assembly and annotation of this rRNA unit. The generated data is applicable for comparative analysis and evolutionary studies among Ilex and related taxa. The raw sequencing data used here is available at DDBJ/EMBL/GenBank (NCBI Resource Coordinators, 2016) [2] Sequence Read Archive (SRA) under the accession SRP043293 and the consensus 45S ribosomal RNA sequence has been deposited there under the accession GFHV00000000.
Instituto de Patología Vegetal
Fil: Aguilera, Patricia Mabel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina. Universidad Nacional de Misiones. Instituto de Biotecnología de Misiones; Argentina
Fil: Debat, Humberto Julio. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Grabiele, Mauro. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina. Universidad Nacional de Misiones. Instituto de Biotecnología de Misiones; Argentina
Fuente
Data in Brief 12 : 649-651 (June 2017)
Materia
Mate
ARN
ARN Ribosomial
Genética
Secuencia Nucleotídica
RNA
Ribosomal RNA
Genetics
Nucleotide Sequence
Yerba Mate
Secuencia Genética
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
oai:localhost:20.500.12123/2250
Acceder
id INTADig_794dbac0a1a51e4f7725174c2bf49ddd
oai_identifier_str oai:localhost:20.500.12123/2250
network_acronym_str INTADig
repository_id_str l
network_name_str INTA Digital (INTA)
spelling Dataset of the transcribed 45S ribosomal RNA sequence of the tree crop “yerba mate”Aguilera, Patricia MabelDebat, Humberto JulioGrabiele, MauroMateARNARN RibosomialGenéticaSecuencia NucleotídicaRNARibosomal RNAGeneticsNucleotide SequenceYerba MateSecuencia GenéticaThis contribution contains data related to the research article entitled “The 18S-25S ribosomal RNA unit of yerba mate (Ilex paraguariensis A. St.-Hil.)” (Aguilera et al., 2016) [1]. Through a bioinformatic approach involving NGS data, we provide information of the transcribed 45S ribosomal RNA (rRNA) sequence of yerba mate, the first reference for the Ilex L. genus. This dataset (Supplementary file 1) comprises information regarding the assembly and annotation of this rRNA unit. The generated data is applicable for comparative analysis and evolutionary studies among Ilex and related taxa. The raw sequencing data used here is available at DDBJ/EMBL/GenBank (NCBI Resource Coordinators, 2016) [2] Sequence Read Archive (SRA) under the accession SRP043293 and the consensus 45S ribosomal RNA sequence has been deposited there under the accession GFHV00000000.Instituto de Patología VegetalFil: Aguilera, Patricia Mabel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina. Universidad Nacional de Misiones. Instituto de Biotecnología de Misiones; ArgentinaFil: Debat, Humberto Julio. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; ArgentinaFil: Grabiele, Mauro. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina. Universidad Nacional de Misiones. Instituto de Biotecnología de Misiones; Argentina2018-04-16T12:28:05Z2018-04-16T12:28:05Z2017-06info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttps://www.sciencedirect.com/science/article/pii/S2352340917301762?via%3Dihubhttp://hdl.handle.net/20.500.12123/22502352-3409https://doi.org/10.1016/j.dib.2017.04.044Data in Brief 12 : 649-651 (June 2017)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)2025-09-11T10:22:21Zoai:localhost:20.500.12123/2250instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-09-11 10:22:22.252INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv Dataset of the transcribed 45S ribosomal RNA sequence of the tree crop “yerba mate”
title Dataset of the transcribed 45S ribosomal RNA sequence of the tree crop “yerba mate”
spellingShingle Dataset of the transcribed 45S ribosomal RNA sequence of the tree crop “yerba mate”
Aguilera, Patricia Mabel
Mate
ARN
ARN Ribosomial
Genética
Secuencia Nucleotídica
RNA
Ribosomal RNA
Genetics
Nucleotide Sequence
Yerba Mate
Secuencia Genética
title_short Dataset of the transcribed 45S ribosomal RNA sequence of the tree crop “yerba mate”
title_full Dataset of the transcribed 45S ribosomal RNA sequence of the tree crop “yerba mate”
title_fullStr Dataset of the transcribed 45S ribosomal RNA sequence of the tree crop “yerba mate”
title_full_unstemmed Dataset of the transcribed 45S ribosomal RNA sequence of the tree crop “yerba mate”
title_sort Dataset of the transcribed 45S ribosomal RNA sequence of the tree crop “yerba mate”
dc.creator.none.fl_str_mv Aguilera, Patricia Mabel
Debat, Humberto Julio
Grabiele, Mauro
author Aguilera, Patricia Mabel
author_facet Aguilera, Patricia Mabel
Debat, Humberto Julio
Grabiele, Mauro
author_role author
author2 Debat, Humberto Julio
Grabiele, Mauro
author2_role author
author
dc.subject.none.fl_str_mv Mate
ARN
ARN Ribosomial
Genética
Secuencia Nucleotídica
RNA
Ribosomal RNA
Genetics
Nucleotide Sequence
Yerba Mate
Secuencia Genética
topic Mate
ARN
ARN Ribosomial
Genética
Secuencia Nucleotídica
RNA
Ribosomal RNA
Genetics
Nucleotide Sequence
Yerba Mate
Secuencia Genética
dc.description.none.fl_txt_mv This contribution contains data related to the research article entitled “The 18S-25S ribosomal RNA unit of yerba mate (Ilex paraguariensis A. St.-Hil.)” (Aguilera et al., 2016) [1]. Through a bioinformatic approach involving NGS data, we provide information of the transcribed 45S ribosomal RNA (rRNA) sequence of yerba mate, the first reference for the Ilex L. genus. This dataset (Supplementary file 1) comprises information regarding the assembly and annotation of this rRNA unit. The generated data is applicable for comparative analysis and evolutionary studies among Ilex and related taxa. The raw sequencing data used here is available at DDBJ/EMBL/GenBank (NCBI Resource Coordinators, 2016) [2] Sequence Read Archive (SRA) under the accession SRP043293 and the consensus 45S ribosomal RNA sequence has been deposited there under the accession GFHV00000000.
Instituto de Patología Vegetal
Fil: Aguilera, Patricia Mabel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina. Universidad Nacional de Misiones. Instituto de Biotecnología de Misiones; Argentina
Fil: Debat, Humberto Julio. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Grabiele, Mauro. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina. Universidad Nacional de Misiones. Instituto de Biotecnología de Misiones; Argentina
description This contribution contains data related to the research article entitled “The 18S-25S ribosomal RNA unit of yerba mate (Ilex paraguariensis A. St.-Hil.)” (Aguilera et al., 2016) [1]. Through a bioinformatic approach involving NGS data, we provide information of the transcribed 45S ribosomal RNA (rRNA) sequence of yerba mate, the first reference for the Ilex L. genus. This dataset (Supplementary file 1) comprises information regarding the assembly and annotation of this rRNA unit. The generated data is applicable for comparative analysis and evolutionary studies among Ilex and related taxa. The raw sequencing data used here is available at DDBJ/EMBL/GenBank (NCBI Resource Coordinators, 2016) [2] Sequence Read Archive (SRA) under the accession SRP043293 and the consensus 45S ribosomal RNA sequence has been deposited there under the accession GFHV00000000.
publishDate 2017
dc.date.none.fl_str_mv 2017-06
2018-04-16T12:28:05Z
2018-04-16T12:28:05Z
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://www.sciencedirect.com/science/article/pii/S2352340917301762?via%3Dihub
http://hdl.handle.net/20.500.12123/2250
2352-3409
https://doi.org/10.1016/j.dib.2017.04.044
url https://www.sciencedirect.com/science/article/pii/S2352340917301762?via%3Dihub
http://hdl.handle.net/20.500.12123/2250
https://doi.org/10.1016/j.dib.2017.04.044
identifier_str_mv 2352-3409
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv Data in Brief 12 : 649-651 (June 2017)
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
_version_ 1842975467505713152
score 12.993085

Publicaciones similares