Draft genome sequence data of Nothopassalora personata, peanut foliar pathogen from Argentina

Autores
Monguillot, Joaquín Humberto; Arias, Renee S.; Orner, Valerie A.; Massa, Alicia N.; Sobolev, Victor S.; Bernanrdi Lima, Nelson; Paredes, Juan Andrés; Oddino, Claudio; Carmona, Marcelo; Conforto, Erica Cinthia
Año de publicación
2024
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Late leaf spot (LLS) caused by the Ascomycete Nothopassalora personata (N.p.) (Syn. Cercosporidium personatum) is the main foliar disease of peanuts in Argentina and in peanut producing areas of the world, causing up to 70% yield losses. The extremely slow growth of this fungus in culture, that takes around one month to form a 1 cm colony (0.45 mm/day), and the lack of adequate young tissues from where to extract nucleic acids, have hindered genetic studies of this pathogen. Here, we report the first genome sequence of a N. personata isolate from South America, as well as genetic variants on its conserved genes, and the complete sequence of its mating-type locus MAT1-2 idiomorph. The N. personata isolate IPAVE 0302 was obtained from peanut leaves in Córdoba, Argentina. The whole genome sequencing of IPAVE 0302 was performed as paired end 150 bp NovaSeq 6000 and de novo assembled. Clean reads were mapped to the reference genome for this species NRRL 64463 and the genetic variants on highly conserved genes and throughout the genome were analyzed. Sequencing data were submitted to NCBI GenBank Bioproject PRJNA948451, accession number SRR23957761. Additional Fasta files are available from Harvard Dataverse
Instituto de Patología Vegetal
Fil: Monguillot, Joaquín Humberto. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Monguillot, Joaquín Humberto. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Arias, Renee S. United States Department of Agriculture (USDA). Agricultural Research Service (ARS). National Peanut Research Laboratory (NPRL); Estados Unidos
Fil: Orner, Valerie A. United States Department of Agriculture (USDA). Agricultural Research Service (ARS). National Peanut Research Laboratory (NPRL); Estados Unidos
Fil: Massa, Alicia N. United States Department of Agriculture (USDA). Agricultural Research Service (ARS). National Peanut Research Laboratory (NPRL); Estados Unidos
Fil: Sobolev, Victor S. United States Department of Agriculture (USDA). Agricultural Research Service (ARS). National Peanut Research Laboratory (NPRL); Estados Unidos
Fil: Bernanrdi Lima, Nelson. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Bernanrdi Lima, Nelson. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Paredes, Juan Andrés. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Paredes, Juan Andrés. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Oddino, Claudio M. Universidad Nacional de Río Cuarto. Facultad de Agronomía y Veterinaria. Instituto de Investigación en Micología y Micotoxicología (IMICO); Argentina
Fil: Carmona, Marcelo. Universidad de Buenos Aires. Facultad de Agronomía. Catedra de Fitopatología; Argentina
Fil: Conforto, Erica Cinthia. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Conforto, Erica Cinthia. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fuente
Data in Brief Volume 53 : 110158 (April 2024)
Materia
Arachis hypogaea
Mycosphaerella berkeleyi
Cacahuete
Argentina
Groundnuts
Foliar Diseases
Enfermedades Foliares
Argentina
Late Leaf Spot
Cercosporidium Personatum
MAT locus
Maní
Nothopassalora personata
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
oai:localhost:20.500.12123/16806
Acceder
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oai_identifier_str oai:localhost:20.500.12123/16806
network_acronym_str INTADig
repository_id_str l
network_name_str INTA Digital (INTA)
spelling Draft genome sequence data of Nothopassalora personata, peanut foliar pathogen from ArgentinaMonguillot, Joaquín HumbertoArias, Renee S.Orner, Valerie A.Massa, Alicia N.Sobolev, Victor S.Bernanrdi Lima, NelsonParedes, Juan AndrésOddino, ClaudioCarmona, MarceloConforto, Erica CinthiaArachis hypogaeaMycosphaerella berkeleyiCacahueteArgentinaGroundnutsFoliar DiseasesEnfermedades FoliaresArgentinaLate Leaf SpotCercosporidium PersonatumMAT locusManíNothopassalora personataLate leaf spot (LLS) caused by the Ascomycete Nothopassalora personata (N.p.) (Syn. Cercosporidium personatum) is the main foliar disease of peanuts in Argentina and in peanut producing areas of the world, causing up to 70% yield losses. The extremely slow growth of this fungus in culture, that takes around one month to form a 1 cm colony (0.45 mm/day), and the lack of adequate young tissues from where to extract nucleic acids, have hindered genetic studies of this pathogen. Here, we report the first genome sequence of a N. personata isolate from South America, as well as genetic variants on its conserved genes, and the complete sequence of its mating-type locus MAT1-2 idiomorph. The N. personata isolate IPAVE 0302 was obtained from peanut leaves in Córdoba, Argentina. The whole genome sequencing of IPAVE 0302 was performed as paired end 150 bp NovaSeq 6000 and de novo assembled. Clean reads were mapped to the reference genome for this species NRRL 64463 and the genetic variants on highly conserved genes and throughout the genome were analyzed. Sequencing data were submitted to NCBI GenBank Bioproject PRJNA948451, accession number SRR23957761. Additional Fasta files are available from Harvard DataverseInstituto de Patología VegetalFil: Monguillot, Joaquín Humberto. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); ArgentinaFil: Monguillot, Joaquín Humberto. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; ArgentinaFil: Arias, Renee S. United States Department of Agriculture (USDA). Agricultural Research Service (ARS). National Peanut Research Laboratory (NPRL); Estados UnidosFil: Orner, Valerie A. United States Department of Agriculture (USDA). Agricultural Research Service (ARS). National Peanut Research Laboratory (NPRL); Estados UnidosFil: Massa, Alicia N. United States Department of Agriculture (USDA). Agricultural Research Service (ARS). National Peanut Research Laboratory (NPRL); Estados UnidosFil: Sobolev, Victor S. United States Department of Agriculture (USDA). Agricultural Research Service (ARS). National Peanut Research Laboratory (NPRL); Estados UnidosFil: Bernanrdi Lima, Nelson. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); ArgentinaFil: Bernanrdi Lima, Nelson. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; ArgentinaFil: Paredes, Juan Andrés. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; ArgentinaFil: Paredes, Juan Andrés. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); ArgentinaFil: Oddino, Claudio M. Universidad Nacional de Río Cuarto. Facultad de Agronomía y Veterinaria. Instituto de Investigación en Micología y Micotoxicología (IMICO); ArgentinaFil: Carmona, Marcelo. Universidad de Buenos Aires. Facultad de Agronomía. Catedra de Fitopatología; ArgentinaFil: Conforto, Erica Cinthia. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; ArgentinaFil: Conforto, Erica Cinthia. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); ArgentinaElsevier2024-02-26T16:06:17Z2024-02-26T16:06:17Z2024-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://hdl.handle.net/20.500.12123/16806https://www.sciencedirect.com/science/article/pii/S235234092400129X2352-3409 (online)https://doi.org/10.1016/j.dib.2024.110158Data in Brief Volume 53 : 110158 (April 2024)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repograntAgreement/INTA/2019-PE-E4-I086-001, Monitoreo, caracterización y manejo de plagas resistentes a fitosanitarios y organismos geneticamente modificadosinfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)2025-09-04T09:50:14Zoai:localhost:20.500.12123/16806instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-09-04 09:50:14.504INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv Draft genome sequence data of Nothopassalora personata, peanut foliar pathogen from Argentina
title Draft genome sequence data of Nothopassalora personata, peanut foliar pathogen from Argentina
spellingShingle Draft genome sequence data of Nothopassalora personata, peanut foliar pathogen from Argentina
Monguillot, Joaquín Humberto
Arachis hypogaea
Mycosphaerella berkeleyi
Cacahuete
Argentina
Groundnuts
Foliar Diseases
Enfermedades Foliares
Argentina
Late Leaf Spot
Cercosporidium Personatum
MAT locus
Maní
Nothopassalora personata
title_short Draft genome sequence data of Nothopassalora personata, peanut foliar pathogen from Argentina
title_full Draft genome sequence data of Nothopassalora personata, peanut foliar pathogen from Argentina
title_fullStr Draft genome sequence data of Nothopassalora personata, peanut foliar pathogen from Argentina
title_full_unstemmed Draft genome sequence data of Nothopassalora personata, peanut foliar pathogen from Argentina
title_sort Draft genome sequence data of Nothopassalora personata, peanut foliar pathogen from Argentina
dc.creator.none.fl_str_mv Monguillot, Joaquín Humberto
Arias, Renee S.
Orner, Valerie A.
Massa, Alicia N.
Sobolev, Victor S.
Bernanrdi Lima, Nelson
Paredes, Juan Andrés
Oddino, Claudio
Carmona, Marcelo
Conforto, Erica Cinthia
author Monguillot, Joaquín Humberto
author_facet Monguillot, Joaquín Humberto
Arias, Renee S.
Orner, Valerie A.
Massa, Alicia N.
Sobolev, Victor S.
Bernanrdi Lima, Nelson
Paredes, Juan Andrés
Oddino, Claudio
Carmona, Marcelo
Conforto, Erica Cinthia
author_role author
author2 Arias, Renee S.
Orner, Valerie A.
Massa, Alicia N.
Sobolev, Victor S.
Bernanrdi Lima, Nelson
Paredes, Juan Andrés
Oddino, Claudio
Carmona, Marcelo
Conforto, Erica Cinthia
author2_role author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Arachis hypogaea
Mycosphaerella berkeleyi
Cacahuete
Argentina
Groundnuts
Foliar Diseases
Enfermedades Foliares
Argentina
Late Leaf Spot
Cercosporidium Personatum
MAT locus
Maní
Nothopassalora personata
topic Arachis hypogaea
Mycosphaerella berkeleyi
Cacahuete
Argentina
Groundnuts
Foliar Diseases
Enfermedades Foliares
Argentina
Late Leaf Spot
Cercosporidium Personatum
MAT locus
Maní
Nothopassalora personata
dc.description.none.fl_txt_mv Late leaf spot (LLS) caused by the Ascomycete Nothopassalora personata (N.p.) (Syn. Cercosporidium personatum) is the main foliar disease of peanuts in Argentina and in peanut producing areas of the world, causing up to 70% yield losses. The extremely slow growth of this fungus in culture, that takes around one month to form a 1 cm colony (0.45 mm/day), and the lack of adequate young tissues from where to extract nucleic acids, have hindered genetic studies of this pathogen. Here, we report the first genome sequence of a N. personata isolate from South America, as well as genetic variants on its conserved genes, and the complete sequence of its mating-type locus MAT1-2 idiomorph. The N. personata isolate IPAVE 0302 was obtained from peanut leaves in Córdoba, Argentina. The whole genome sequencing of IPAVE 0302 was performed as paired end 150 bp NovaSeq 6000 and de novo assembled. Clean reads were mapped to the reference genome for this species NRRL 64463 and the genetic variants on highly conserved genes and throughout the genome were analyzed. Sequencing data were submitted to NCBI GenBank Bioproject PRJNA948451, accession number SRR23957761. Additional Fasta files are available from Harvard Dataverse
Instituto de Patología Vegetal
Fil: Monguillot, Joaquín Humberto. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Monguillot, Joaquín Humberto. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Arias, Renee S. United States Department of Agriculture (USDA). Agricultural Research Service (ARS). National Peanut Research Laboratory (NPRL); Estados Unidos
Fil: Orner, Valerie A. United States Department of Agriculture (USDA). Agricultural Research Service (ARS). National Peanut Research Laboratory (NPRL); Estados Unidos
Fil: Massa, Alicia N. United States Department of Agriculture (USDA). Agricultural Research Service (ARS). National Peanut Research Laboratory (NPRL); Estados Unidos
Fil: Sobolev, Victor S. United States Department of Agriculture (USDA). Agricultural Research Service (ARS). National Peanut Research Laboratory (NPRL); Estados Unidos
Fil: Bernanrdi Lima, Nelson. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Bernanrdi Lima, Nelson. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Paredes, Juan Andrés. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Paredes, Juan Andrés. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Oddino, Claudio M. Universidad Nacional de Río Cuarto. Facultad de Agronomía y Veterinaria. Instituto de Investigación en Micología y Micotoxicología (IMICO); Argentina
Fil: Carmona, Marcelo. Universidad de Buenos Aires. Facultad de Agronomía. Catedra de Fitopatología; Argentina
Fil: Conforto, Erica Cinthia. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Conforto, Erica Cinthia. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
description Late leaf spot (LLS) caused by the Ascomycete Nothopassalora personata (N.p.) (Syn. Cercosporidium personatum) is the main foliar disease of peanuts in Argentina and in peanut producing areas of the world, causing up to 70% yield losses. The extremely slow growth of this fungus in culture, that takes around one month to form a 1 cm colony (0.45 mm/day), and the lack of adequate young tissues from where to extract nucleic acids, have hindered genetic studies of this pathogen. Here, we report the first genome sequence of a N. personata isolate from South America, as well as genetic variants on its conserved genes, and the complete sequence of its mating-type locus MAT1-2 idiomorph. The N. personata isolate IPAVE 0302 was obtained from peanut leaves in Córdoba, Argentina. The whole genome sequencing of IPAVE 0302 was performed as paired end 150 bp NovaSeq 6000 and de novo assembled. Clean reads were mapped to the reference genome for this species NRRL 64463 and the genetic variants on highly conserved genes and throughout the genome were analyzed. Sequencing data were submitted to NCBI GenBank Bioproject PRJNA948451, accession number SRR23957761. Additional Fasta files are available from Harvard Dataverse
publishDate 2024
dc.date.none.fl_str_mv 2024-02-26T16:06:17Z
2024-02-26T16:06:17Z
2024-04
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12123/16806
https://www.sciencedirect.com/science/article/pii/S235234092400129X
2352-3409 (online)
https://doi.org/10.1016/j.dib.2024.110158
url http://hdl.handle.net/20.500.12123/16806
https://www.sciencedirect.com/science/article/pii/S235234092400129X
https://doi.org/10.1016/j.dib.2024.110158
identifier_str_mv 2352-3409 (online)
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repograntAgreement/INTA/2019-PE-E4-I086-001, Monitoreo, caracterización y manejo de plagas resistentes a fitosanitarios y organismos geneticamente modificados
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv Data in Brief Volume 53 : 110158 (April 2024)
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
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