Genome characterization of three potyviruses affecting maize in Argentina

Autores
Trucco, Veronica Milagros; Cabrera Mederos, Dariel; Castellanos Collazo, Onias; Vaghi Medina, Carlos Gaston; Lenardon, Sergio Luis; Giolitti, Fabian
Año de publicación
2023
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Argentina is globally recognized as both producer and exporter of maize, the most important cereal crop in the country. Several potyviruses affect the production of various crops, including maize. In this work, the complete nucleotide sequences of the RNA genome of three potyviruses, johnsongrass mosaic virus (JGMV), maize dwarf mosaic virus (MDMV) and sugarcane mosaic virus (SCMV), isolated from maize were obtained by next-generation sequencing (Illumina technology). The JGMV, MDMV and SCMV viral genomes were 9780, 9807 and 9729 nucleotides long, respectively. The polyprotein organization of each of potyvirus genome was determined; their sequences showed high values compared with polyprotein sequences of the other isolates reported worldwide (> 76.1% at the nucleotide sequence and > 85% at the amino acid sequence). The results of this work are the first data in Argentina of complete genome sequences of potyviruses obtained from maize and the first obtained for JGMV and MDMV.
Instituto de Patología Vegetal
Fil: Trucco, Veronica Milagros. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Trucco, Veronica Milagros. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Cabrera Mederos, Dariel. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Cabrera Mederos, Dariel. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Castellanos Collazo, Onias. Fondo para la Investigación Científica y Tecnológica (FONCYT); Argentina
Fil: Castellanos Collazo, Onias. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Vaghi Medina, Carlos Gaston. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Vaghi Medina, Carlos Gaston. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Lenardon, Sergio Luis. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Lenardon, Sergio Luis. Universidad Nacional de Río Cuarto (UNRC). Facultad de Agronomía y Veterinaria (FAV); Argentina
Fil: Giolitti, Fabian. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Giolitti, Fabian. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fuente
Journal of Phytopathology (First published: 29 March 2023)
Materia
Viruses
Potyvirus
Maize
Virus
Zea Mays
Argentina
Maíz
Illumina Sequencing
ssRNA Genome
Nivel de accesibilidad
acceso restringido
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
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spelling Genome characterization of three potyviruses affecting maize in ArgentinaTrucco, Veronica MilagrosCabrera Mederos, DarielCastellanos Collazo, OniasVaghi Medina, Carlos GastonLenardon, Sergio LuisGiolitti, FabianVirusesPotyvirusMaizeVirusZea MaysArgentinaMaízIllumina SequencingssRNA GenomeArgentina is globally recognized as both producer and exporter of maize, the most important cereal crop in the country. Several potyviruses affect the production of various crops, including maize. In this work, the complete nucleotide sequences of the RNA genome of three potyviruses, johnsongrass mosaic virus (JGMV), maize dwarf mosaic virus (MDMV) and sugarcane mosaic virus (SCMV), isolated from maize were obtained by next-generation sequencing (Illumina technology). The JGMV, MDMV and SCMV viral genomes were 9780, 9807 and 9729 nucleotides long, respectively. The polyprotein organization of each of potyvirus genome was determined; their sequences showed high values compared with polyprotein sequences of the other isolates reported worldwide (> 76.1% at the nucleotide sequence and > 85% at the amino acid sequence). The results of this work are the first data in Argentina of complete genome sequences of potyviruses obtained from maize and the first obtained for JGMV and MDMV.Instituto de Patología VegetalFil: Trucco, Veronica Milagros. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; ArgentinaFil: Trucco, Veronica Milagros. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); ArgentinaFil: Cabrera Mederos, Dariel. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); ArgentinaFil: Cabrera Mederos, Dariel. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; ArgentinaFil: Castellanos Collazo, Onias. Fondo para la Investigación Científica y Tecnológica (FONCYT); ArgentinaFil: Castellanos Collazo, Onias. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; ArgentinaFil: Vaghi Medina, Carlos Gaston. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; ArgentinaFil: Vaghi Medina, Carlos Gaston. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); ArgentinaFil: Lenardon, Sergio Luis. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; ArgentinaFil: Lenardon, Sergio Luis. Universidad Nacional de Río Cuarto (UNRC). Facultad de Agronomía y Veterinaria (FAV); ArgentinaFil: Giolitti, Fabian. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; ArgentinaFil: Giolitti, Fabian. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); ArgentinaWiley2023-03-31T11:37:46Z2023-03-31T11:37:46Z2023-03-29info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://hdl.handle.net/20.500.12123/14376https://onlinelibrary.wiley.com/doi/10.1111/jph.131730931-17851439-0434 (online)https://doi.org/10.1111/jph.13173Journal of Phytopathology (First published: 29 March 2023)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología AgropecuariaengArgentina .......... (nation) (World, South America)7006477info:eu-repo/semantics/restrictedAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)2025-09-29T13:45:56Zoai:localhost:20.500.12123/14376instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-09-29 13:45:56.999INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv Genome characterization of three potyviruses affecting maize in Argentina
title Genome characterization of three potyviruses affecting maize in Argentina
spellingShingle Genome characterization of three potyviruses affecting maize in Argentina
Trucco, Veronica Milagros
Viruses
Potyvirus
Maize
Virus
Zea Mays
Argentina
Maíz
Illumina Sequencing
ssRNA Genome
title_short Genome characterization of three potyviruses affecting maize in Argentina
title_full Genome characterization of three potyviruses affecting maize in Argentina
title_fullStr Genome characterization of three potyviruses affecting maize in Argentina
title_full_unstemmed Genome characterization of three potyviruses affecting maize in Argentina
title_sort Genome characterization of three potyviruses affecting maize in Argentina
dc.creator.none.fl_str_mv Trucco, Veronica Milagros
Cabrera Mederos, Dariel
Castellanos Collazo, Onias
Vaghi Medina, Carlos Gaston
Lenardon, Sergio Luis
Giolitti, Fabian
author Trucco, Veronica Milagros
author_facet Trucco, Veronica Milagros
Cabrera Mederos, Dariel
Castellanos Collazo, Onias
Vaghi Medina, Carlos Gaston
Lenardon, Sergio Luis
Giolitti, Fabian
author_role author
author2 Cabrera Mederos, Dariel
Castellanos Collazo, Onias
Vaghi Medina, Carlos Gaston
Lenardon, Sergio Luis
Giolitti, Fabian
author2_role author
author
author
author
author
dc.subject.none.fl_str_mv Viruses
Potyvirus
Maize
Virus
Zea Mays
Argentina
Maíz
Illumina Sequencing
ssRNA Genome
topic Viruses
Potyvirus
Maize
Virus
Zea Mays
Argentina
Maíz
Illumina Sequencing
ssRNA Genome
dc.description.none.fl_txt_mv Argentina is globally recognized as both producer and exporter of maize, the most important cereal crop in the country. Several potyviruses affect the production of various crops, including maize. In this work, the complete nucleotide sequences of the RNA genome of three potyviruses, johnsongrass mosaic virus (JGMV), maize dwarf mosaic virus (MDMV) and sugarcane mosaic virus (SCMV), isolated from maize were obtained by next-generation sequencing (Illumina technology). The JGMV, MDMV and SCMV viral genomes were 9780, 9807 and 9729 nucleotides long, respectively. The polyprotein organization of each of potyvirus genome was determined; their sequences showed high values compared with polyprotein sequences of the other isolates reported worldwide (> 76.1% at the nucleotide sequence and > 85% at the amino acid sequence). The results of this work are the first data in Argentina of complete genome sequences of potyviruses obtained from maize and the first obtained for JGMV and MDMV.
Instituto de Patología Vegetal
Fil: Trucco, Veronica Milagros. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Trucco, Veronica Milagros. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Cabrera Mederos, Dariel. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Cabrera Mederos, Dariel. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Castellanos Collazo, Onias. Fondo para la Investigación Científica y Tecnológica (FONCYT); Argentina
Fil: Castellanos Collazo, Onias. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Vaghi Medina, Carlos Gaston. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Vaghi Medina, Carlos Gaston. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
Fil: Lenardon, Sergio Luis. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Lenardon, Sergio Luis. Universidad Nacional de Río Cuarto (UNRC). Facultad de Agronomía y Veterinaria (FAV); Argentina
Fil: Giolitti, Fabian. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Patología Vegetal; Argentina
Fil: Giolitti, Fabian. Consejo Nacional de Investigaciones Científicas y Técnicas. Unidad de Fitopatología y Modelización Agrícola (UFyMA); Argentina
description Argentina is globally recognized as both producer and exporter of maize, the most important cereal crop in the country. Several potyviruses affect the production of various crops, including maize. In this work, the complete nucleotide sequences of the RNA genome of three potyviruses, johnsongrass mosaic virus (JGMV), maize dwarf mosaic virus (MDMV) and sugarcane mosaic virus (SCMV), isolated from maize were obtained by next-generation sequencing (Illumina technology). The JGMV, MDMV and SCMV viral genomes were 9780, 9807 and 9729 nucleotides long, respectively. The polyprotein organization of each of potyvirus genome was determined; their sequences showed high values compared with polyprotein sequences of the other isolates reported worldwide (> 76.1% at the nucleotide sequence and > 85% at the amino acid sequence). The results of this work are the first data in Argentina of complete genome sequences of potyviruses obtained from maize and the first obtained for JGMV and MDMV.
publishDate 2023
dc.date.none.fl_str_mv 2023-03-31T11:37:46Z
2023-03-31T11:37:46Z
2023-03-29
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12123/14376
https://onlinelibrary.wiley.com/doi/10.1111/jph.13173
0931-1785
1439-0434 (online)
https://doi.org/10.1111/jph.13173
url http://hdl.handle.net/20.500.12123/14376
https://onlinelibrary.wiley.com/doi/10.1111/jph.13173
https://doi.org/10.1111/jph.13173
identifier_str_mv 0931-1785
1439-0434 (online)
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/restrictedAccess
http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
eu_rights_str_mv restrictedAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.format.none.fl_str_mv application/pdf
dc.coverage.none.fl_str_mv Argentina .......... (nation) (World, South America)
7006477
dc.publisher.none.fl_str_mv Wiley
publisher.none.fl_str_mv Wiley
dc.source.none.fl_str_mv Journal of Phytopathology (First published: 29 March 2023)
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
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score 12.559606

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