Genome-wide analysis of the snakin/GASA gene family in solanum tuberosum cv. Kennebec

Autores
Nahirñak, Vanesa; Rivarola, Maximo Lisandro; Gonzalez De Urreta, Martin Salvador; Paniego, Norma Beatriz; Hopp, Horacio Esteban; Almasia, Natalia Ines; Vazquez Rovere, Cecilia
Año de publicación
2016
Idioma
inglés
Tipo de recurso
artículo
Estado
versión aceptada
Descripción
Snakin/GASA proteins have been involved in different aspects of plant growth and development although their exact role is still intriguing. All of them maintain 12 cysteines of the C-terminus in highly conserved positions that are responsible for their structure and are essential for their biochemical activity as antioxidants. Two members were isolated from Solanum tuberosum to date (Snakin-1 and Snakin-2) and were shown to have antimicrobial activity. We have recently demonstrated that Snakin-1 has additional roles in plant growth and development. We carried out a genome-wide search for new Snakin/GASA family members in potato. 16 Snakin/GASA genes were isolated, sequenced and characterized. Interestingly, we found in Solanum tuberosum subsp. tuberosum cv. Kennebec that Snakin-1, Snakin-2 and Snakin-3 expression is affected by bacterial and/or fungal inoculation. These results strengthen the participation of Snakin-1 and Snakin-2 genes in biotic stress tolerance and suggest that Snakin-3 is also involved in plant defense. The data presented here could be a good starting point for more focused and deep investigations regarding the biological functions of potato Snakin/GASA genes during plant development and in response to environmental stress.
Inst. de Biotecnología
Fil: Nahirñak, Vanesa. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Rivarola, Maximo Lisandro. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Gonzalez De Urreta, Martin Salvador. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Hopp, Horacio Esteban. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina
Fil: Almasia, Natalia Ines. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina
Fil: Vazquez Rovere, Cecilia. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fuente
American journal of potato research 93 (2) : 172–188. (April 2016)
Materia
Genética
Papa
Variedades
Solanum Tuberosum
Genetics
Potatoes
Varieties
Variedad Kennebec
Snakin/GASA
Nivel de accesibilidad
acceso restringido
Condiciones de uso
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
oai:localhost:20.500.12123/1595
Acceder
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oai_identifier_str oai:localhost:20.500.12123/1595
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network_name_str INTA Digital (INTA)
spelling Genome-wide analysis of the snakin/GASA gene family in solanum tuberosum cv. KennebecNahirñak, VanesaRivarola, Maximo LisandroGonzalez De Urreta, Martin SalvadorPaniego, Norma BeatrizHopp, Horacio EstebanAlmasia, Natalia InesVazquez Rovere, CeciliaGenéticaPapaVariedadesSolanum TuberosumGeneticsPotatoesVarietiesVariedad KennebecSnakin/GASASnakin/GASA proteins have been involved in different aspects of plant growth and development although their exact role is still intriguing. All of them maintain 12 cysteines of the C-terminus in highly conserved positions that are responsible for their structure and are essential for their biochemical activity as antioxidants. Two members were isolated from Solanum tuberosum to date (Snakin-1 and Snakin-2) and were shown to have antimicrobial activity. We have recently demonstrated that Snakin-1 has additional roles in plant growth and development. We carried out a genome-wide search for new Snakin/GASA family members in potato. 16 Snakin/GASA genes were isolated, sequenced and characterized. Interestingly, we found in Solanum tuberosum subsp. tuberosum cv. Kennebec that Snakin-1, Snakin-2 and Snakin-3 expression is affected by bacterial and/or fungal inoculation. These results strengthen the participation of Snakin-1 and Snakin-2 genes in biotic stress tolerance and suggest that Snakin-3 is also involved in plant defense. The data presented here could be a good starting point for more focused and deep investigations regarding the biological functions of potato Snakin/GASA genes during plant development and in response to environmental stress.Inst. de BiotecnologíaFil: Nahirñak, Vanesa. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Rivarola, Maximo Lisandro. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Gonzalez De Urreta, Martin Salvador. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Hopp, Horacio Esteban. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; ArgentinaFil: Almasia, Natalia Ines. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; ArgentinaFil: Vazquez Rovere, Cecilia. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina2017-10-26T12:27:33Z2017-10-26T12:27:33Z2016-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/acceptedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://hdl.handle.net/20.500.12123/1595https://link.springer.com/article/10.1007/s12230-016-9494-81099-209X (Print)1874-9380 (Online)https://doi.org/10.1007/s12230-016-9494-8American journal of potato research 93 (2) : 172–188. (April 2016)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repo/semantics/restrictedAccess2025-09-04T09:47:06Zoai:localhost:20.500.12123/1595instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-09-04 09:47:07.348INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv Genome-wide analysis of the snakin/GASA gene family in solanum tuberosum cv. Kennebec
title Genome-wide analysis of the snakin/GASA gene family in solanum tuberosum cv. Kennebec
spellingShingle Genome-wide analysis of the snakin/GASA gene family in solanum tuberosum cv. Kennebec
Nahirñak, Vanesa
Genética
Papa
Variedades
Solanum Tuberosum
Genetics
Potatoes
Varieties
Variedad Kennebec
Snakin/GASA
title_short Genome-wide analysis of the snakin/GASA gene family in solanum tuberosum cv. Kennebec
title_full Genome-wide analysis of the snakin/GASA gene family in solanum tuberosum cv. Kennebec
title_fullStr Genome-wide analysis of the snakin/GASA gene family in solanum tuberosum cv. Kennebec
title_full_unstemmed Genome-wide analysis of the snakin/GASA gene family in solanum tuberosum cv. Kennebec
title_sort Genome-wide analysis of the snakin/GASA gene family in solanum tuberosum cv. Kennebec
dc.creator.none.fl_str_mv Nahirñak, Vanesa
Rivarola, Maximo Lisandro
Gonzalez De Urreta, Martin Salvador
Paniego, Norma Beatriz
Hopp, Horacio Esteban
Almasia, Natalia Ines
Vazquez Rovere, Cecilia
author Nahirñak, Vanesa
author_facet Nahirñak, Vanesa
Rivarola, Maximo Lisandro
Gonzalez De Urreta, Martin Salvador
Paniego, Norma Beatriz
Hopp, Horacio Esteban
Almasia, Natalia Ines
Vazquez Rovere, Cecilia
author_role author
author2 Rivarola, Maximo Lisandro
Gonzalez De Urreta, Martin Salvador
Paniego, Norma Beatriz
Hopp, Horacio Esteban
Almasia, Natalia Ines
Vazquez Rovere, Cecilia
author2_role author
author
author
author
author
author
dc.subject.none.fl_str_mv Genética
Papa
Variedades
Solanum Tuberosum
Genetics
Potatoes
Varieties
Variedad Kennebec
Snakin/GASA
topic Genética
Papa
Variedades
Solanum Tuberosum
Genetics
Potatoes
Varieties
Variedad Kennebec
Snakin/GASA
dc.description.none.fl_txt_mv Snakin/GASA proteins have been involved in different aspects of plant growth and development although their exact role is still intriguing. All of them maintain 12 cysteines of the C-terminus in highly conserved positions that are responsible for their structure and are essential for their biochemical activity as antioxidants. Two members were isolated from Solanum tuberosum to date (Snakin-1 and Snakin-2) and were shown to have antimicrobial activity. We have recently demonstrated that Snakin-1 has additional roles in plant growth and development. We carried out a genome-wide search for new Snakin/GASA family members in potato. 16 Snakin/GASA genes were isolated, sequenced and characterized. Interestingly, we found in Solanum tuberosum subsp. tuberosum cv. Kennebec that Snakin-1, Snakin-2 and Snakin-3 expression is affected by bacterial and/or fungal inoculation. These results strengthen the participation of Snakin-1 and Snakin-2 genes in biotic stress tolerance and suggest that Snakin-3 is also involved in plant defense. The data presented here could be a good starting point for more focused and deep investigations regarding the biological functions of potato Snakin/GASA genes during plant development and in response to environmental stress.
Inst. de Biotecnología
Fil: Nahirñak, Vanesa. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Rivarola, Maximo Lisandro. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Gonzalez De Urreta, Martin Salvador. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Hopp, Horacio Esteban. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina
Fil: Almasia, Natalia Ines. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina
Fil: Vazquez Rovere, Cecilia. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
description Snakin/GASA proteins have been involved in different aspects of plant growth and development although their exact role is still intriguing. All of them maintain 12 cysteines of the C-terminus in highly conserved positions that are responsible for their structure and are essential for their biochemical activity as antioxidants. Two members were isolated from Solanum tuberosum to date (Snakin-1 and Snakin-2) and were shown to have antimicrobial activity. We have recently demonstrated that Snakin-1 has additional roles in plant growth and development. We carried out a genome-wide search for new Snakin/GASA family members in potato. 16 Snakin/GASA genes were isolated, sequenced and characterized. Interestingly, we found in Solanum tuberosum subsp. tuberosum cv. Kennebec that Snakin-1, Snakin-2 and Snakin-3 expression is affected by bacterial and/or fungal inoculation. These results strengthen the participation of Snakin-1 and Snakin-2 genes in biotic stress tolerance and suggest that Snakin-3 is also involved in plant defense. The data presented here could be a good starting point for more focused and deep investigations regarding the biological functions of potato Snakin/GASA genes during plant development and in response to environmental stress.
publishDate 2016
dc.date.none.fl_str_mv 2016-04
2017-10-26T12:27:33Z
2017-10-26T12:27:33Z
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/acceptedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str acceptedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12123/1595
https://link.springer.com/article/10.1007/s12230-016-9494-8
1099-209X (Print)
1874-9380 (Online)
https://doi.org/10.1007/s12230-016-9494-8
url http://hdl.handle.net/20.500.12123/1595
https://link.springer.com/article/10.1007/s12230-016-9494-8
https://doi.org/10.1007/s12230-016-9494-8
identifier_str_mv 1099-209X (Print)
1874-9380 (Online)
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/restrictedAccess
eu_rights_str_mv restrictedAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv American journal of potato research 93 (2) : 172–188. (April 2016)
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
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score 12.623145

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