Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzees

Autores
Caporale, Alfredo Leandro; Franchini, Lucia Florencia
Año de publicación
2016
Idioma
inglés
Tipo de recurso
documento de conferencia
Estado
versión publicada
Descripción
Understanding the evolution of the human brain is one of the greatest challenges that science faces today. The genetic changes that led to the acquisition of new functional capabilities of our brain are encoded in our genome. Our hypothesis is that the acquisition of new expression patterns in the human lineage of genes involved in the development and functioning of the brain would have been critical for the evolution of our unique cognitive capacities. Using public databases of human accelerated conserved non coding sequences (HAEs or human accelerated elements), we found that the locus of forkhead box P2 (FOXP2) transcription factor contains 6 HAEs, being into the top10 genes with highest number of HAEs, along with some of their putative regulatory targets (RBFOX1, CNTNAP2). Furthermore, this gene has been shown to be critical for normal development of language in humans. Mutations in FOXP2 cause developmental verbal dyspraxia (DVD), and two functional copies of the gene be necessary for a correct development of fluent speech. In this work, we comparatively analyze the 6 HAEs present at this locus through bioinformatics tools, to determine in silico potential transcription factors that would be binding and regulating differentially this gene in humans and chimpanzees. In addition, we functionally characterize these elements through the generation of transgenic zebrafish lines carrying the human or chimpanzee sequence. Through this first approach, we expect to find any difference (gain or loss of function) in the pattern of expression of the reporter protein between orthologs, and to link it to new areas of expression of the FOXP2 gene, and thus may have contributed to the emergence and development of human neuroanatomical features associated with language.
Fil: Caporale, Alfredo Leandro. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Investigaciones en Ingeniería Genética y Biología Molecular "Dr. Héctor N. Torres"; Argentina
Fil: Franchini, Lucia Florencia. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Investigaciones en Ingeniería Genética y Biología Molecular "Dr. Héctor N. Torres"; Argentina
III Taller de Biología Celular y del Desarrollo
Chascomús
Argentina
Instituto Tecnológico de Chascomús
Materia
EVOLUTION
BRAIN
FOXP2
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/236368

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spelling Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzeesCaporale, Alfredo LeandroFranchini, Lucia FlorenciaEVOLUTIONBRAINFOXP2https://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Understanding the evolution of the human brain is one of the greatest challenges that science faces today. The genetic changes that led to the acquisition of new functional capabilities of our brain are encoded in our genome. Our hypothesis is that the acquisition of new expression patterns in the human lineage of genes involved in the development and functioning of the brain would have been critical for the evolution of our unique cognitive capacities. Using public databases of human accelerated conserved non coding sequences (HAEs or human accelerated elements), we found that the locus of forkhead box P2 (FOXP2) transcription factor contains 6 HAEs, being into the top10 genes with highest number of HAEs, along with some of their putative regulatory targets (RBFOX1, CNTNAP2). Furthermore, this gene has been shown to be critical for normal development of language in humans. Mutations in FOXP2 cause developmental verbal dyspraxia (DVD), and two functional copies of the gene be necessary for a correct development of fluent speech. In this work, we comparatively analyze the 6 HAEs present at this locus through bioinformatics tools, to determine in silico potential transcription factors that would be binding and regulating differentially this gene in humans and chimpanzees. In addition, we functionally characterize these elements through the generation of transgenic zebrafish lines carrying the human or chimpanzee sequence. Through this first approach, we expect to find any difference (gain or loss of function) in the pattern of expression of the reporter protein between orthologs, and to link it to new areas of expression of the FOXP2 gene, and thus may have contributed to the emergence and development of human neuroanatomical features associated with language.Fil: Caporale, Alfredo Leandro. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Investigaciones en Ingeniería Genética y Biología Molecular "Dr. Héctor N. Torres"; ArgentinaFil: Franchini, Lucia Florencia. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Investigaciones en Ingeniería Genética y Biología Molecular "Dr. Héctor N. Torres"; ArgentinaIII Taller de Biología Celular y del DesarrolloChascomúsArgentinaInstituto Tecnológico de ChascomúsInstituto Tecnológico de Chascomús2016info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObjectTallerBookhttp://purl.org/coar/resource_type/c_5794info:ar-repo/semantics/documentoDeConferenciaapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/236368Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzees; III Taller de Biología Celular y del Desarrollo; Chascomús; Argentina; 2016; 36-37CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://tallerbcd.wixsite.com/tallerbcd/taller-2014info:eu-repo/semantics/altIdentifier/url/https://205b7032-7b43-4c7b-9b57-fe88b9455462.filesusr.com/ugd/f7a2bf_51326ccca88443959577921ec1cafd04.pdfNacionalinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T09:50:10Zoai:ri.conicet.gov.ar:11336/236368instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 09:50:10.722CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzees
title Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzees
spellingShingle Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzees
Caporale, Alfredo Leandro
EVOLUTION
BRAIN
FOXP2
title_short Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzees
title_full Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzees
title_fullStr Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzees
title_full_unstemmed Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzees
title_sort Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzees
dc.creator.none.fl_str_mv Caporale, Alfredo Leandro
Franchini, Lucia Florencia
author Caporale, Alfredo Leandro
author_facet Caporale, Alfredo Leandro
Franchini, Lucia Florencia
author_role author
author2 Franchini, Lucia Florencia
author2_role author
dc.subject.none.fl_str_mv EVOLUTION
BRAIN
FOXP2
topic EVOLUTION
BRAIN
FOXP2
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Understanding the evolution of the human brain is one of the greatest challenges that science faces today. The genetic changes that led to the acquisition of new functional capabilities of our brain are encoded in our genome. Our hypothesis is that the acquisition of new expression patterns in the human lineage of genes involved in the development and functioning of the brain would have been critical for the evolution of our unique cognitive capacities. Using public databases of human accelerated conserved non coding sequences (HAEs or human accelerated elements), we found that the locus of forkhead box P2 (FOXP2) transcription factor contains 6 HAEs, being into the top10 genes with highest number of HAEs, along with some of their putative regulatory targets (RBFOX1, CNTNAP2). Furthermore, this gene has been shown to be critical for normal development of language in humans. Mutations in FOXP2 cause developmental verbal dyspraxia (DVD), and two functional copies of the gene be necessary for a correct development of fluent speech. In this work, we comparatively analyze the 6 HAEs present at this locus through bioinformatics tools, to determine in silico potential transcription factors that would be binding and regulating differentially this gene in humans and chimpanzees. In addition, we functionally characterize these elements through the generation of transgenic zebrafish lines carrying the human or chimpanzee sequence. Through this first approach, we expect to find any difference (gain or loss of function) in the pattern of expression of the reporter protein between orthologs, and to link it to new areas of expression of the FOXP2 gene, and thus may have contributed to the emergence and development of human neuroanatomical features associated with language.
Fil: Caporale, Alfredo Leandro. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Investigaciones en Ingeniería Genética y Biología Molecular "Dr. Héctor N. Torres"; Argentina
Fil: Franchini, Lucia Florencia. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Investigaciones en Ingeniería Genética y Biología Molecular "Dr. Héctor N. Torres"; Argentina
III Taller de Biología Celular y del Desarrollo
Chascomús
Argentina
Instituto Tecnológico de Chascomús
description Understanding the evolution of the human brain is one of the greatest challenges that science faces today. The genetic changes that led to the acquisition of new functional capabilities of our brain are encoded in our genome. Our hypothesis is that the acquisition of new expression patterns in the human lineage of genes involved in the development and functioning of the brain would have been critical for the evolution of our unique cognitive capacities. Using public databases of human accelerated conserved non coding sequences (HAEs or human accelerated elements), we found that the locus of forkhead box P2 (FOXP2) transcription factor contains 6 HAEs, being into the top10 genes with highest number of HAEs, along with some of their putative regulatory targets (RBFOX1, CNTNAP2). Furthermore, this gene has been shown to be critical for normal development of language in humans. Mutations in FOXP2 cause developmental verbal dyspraxia (DVD), and two functional copies of the gene be necessary for a correct development of fluent speech. In this work, we comparatively analyze the 6 HAEs present at this locus through bioinformatics tools, to determine in silico potential transcription factors that would be binding and regulating differentially this gene in humans and chimpanzees. In addition, we functionally characterize these elements through the generation of transgenic zebrafish lines carrying the human or chimpanzee sequence. Through this first approach, we expect to find any difference (gain or loss of function) in the pattern of expression of the reporter protein between orthologs, and to link it to new areas of expression of the FOXP2 gene, and thus may have contributed to the emergence and development of human neuroanatomical features associated with language.
publishDate 2016
dc.date.none.fl_str_mv 2016
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info:eu-repo/semantics/conferenceObject
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Book
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dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/236368
Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzees; III Taller de Biología Celular y del Desarrollo; Chascomús; Argentina; 2016; 36-37
CONICET Digital
CONICET
url http://hdl.handle.net/11336/236368
identifier_str_mv Comparative analysis of transcriptional regulation of the FOXP2 gene between humans and chimpanzees; III Taller de Biología Celular y del Desarrollo; Chascomús; Argentina; 2016; 36-37
CONICET Digital
CONICET
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language eng
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