Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus group

Autores
Amadio, Ariel Fernando; Benintende, Graciela Beatriz; Zandomeni, Rubén O.
Año de publicación
2009
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Bacillus thuringiensis is an insect pathogen used worldwide as a bioinsecticide. It belongs tothe Bacillus cereus sensu lato group as well as Bacillus anthracis and B. cereus. Plasmids fromthis group of organisms have been implicated in pathogenicity as they carry the genesresponsible for different types of diseases that affect mammals and insects. Some plasmids,like pAW63 and pBT9727, encode a functional conjugation machinery allowing them to betransferred to a recipient cell. They also share extensive homology with the non-functionalconjugation apparatus of pXO2 from B. anthracis. In this study we report the completesequence of three plasmids from an environmental B. thuringiensis isolate from Argentina,obtained by a shotgun sequencing method. We obtained the complete nucleotide sequenceof plasmids pFR12 (12 095 bp), pFR12.5 (12 459 bp) and pFR55 (55 712 bp) from B. thuringiensisINTA-FR7-4. pFR12 and pFR12.5 were classified as cryptic as they do not code forany obvious functions besides replication and mobilization. Both small plasmids were classifiedas RCR plasmids due to similarities with the replicases they encode. Plasmid pFR55showed a structural organization similar to that observed for plasmids pAW63, pBT9727and pXO2. pFR55 also shares a tra region with these plasmids, containing genes relatedto T4SS and conjugation. A comparison between pFR55 and conjugative plasmids led tothe postulation that pFR55 is a conjugative plasmid. Genes related to replication functionsin pFR55 are different to those described for plasmids with known complete sequences.pFR55 is the first completely sequenced plasmid with a replication machinery related tothat of ori44. The analysis of the complete sequence of plasmids from an environmentalisolate of B. thuringiensis permitted the identification of a near complete conjugation apparatusin pFR55, resembling those of plasmids pAW63, pBT9727 and pXO2. The availabilityof this sequence is a step forward in the study of the molecular basis of the conjugative processin Gram positive bacteria, particularly due to the similarity with known conjugationsystems. It is also a contribution to the expansion of the non-pathogenic B. cereus plasmidgene pool.
Fil: Amadio, Ariel Fernando. Instituto Nacional de Tecnología Agropecuaria. Centro Regional Santa Fe. Estación Experimental Agropecuaria Rafaela; Argentina
Fil: Benintende, Graciela Beatriz. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Microbiología y Zoología Agrícola; Argentina
Fil: Zandomeni, Rubén O.. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Microbiología y Zoología Agrícola; Argentina
Materia
Bacillus thuringiensis
Conjugation
Environmental isolate
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/103969

id CONICETDig_f67913c811b282e7ae56fd15863701e4
oai_identifier_str oai:ri.conicet.gov.ar:11336/103969
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus groupAmadio, Ariel FernandoBenintende, Graciela BeatrizZandomeni, Rubén O.Bacillus thuringiensisConjugationEnvironmental isolatehttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Bacillus thuringiensis is an insect pathogen used worldwide as a bioinsecticide. It belongs tothe Bacillus cereus sensu lato group as well as Bacillus anthracis and B. cereus. Plasmids fromthis group of organisms have been implicated in pathogenicity as they carry the genesresponsible for different types of diseases that affect mammals and insects. Some plasmids,like pAW63 and pBT9727, encode a functional conjugation machinery allowing them to betransferred to a recipient cell. They also share extensive homology with the non-functionalconjugation apparatus of pXO2 from B. anthracis. In this study we report the completesequence of three plasmids from an environmental B. thuringiensis isolate from Argentina,obtained by a shotgun sequencing method. We obtained the complete nucleotide sequenceof plasmids pFR12 (12 095 bp), pFR12.5 (12 459 bp) and pFR55 (55 712 bp) from B. thuringiensisINTA-FR7-4. pFR12 and pFR12.5 were classified as cryptic as they do not code forany obvious functions besides replication and mobilization. Both small plasmids were classifiedas RCR plasmids due to similarities with the replicases they encode. Plasmid pFR55showed a structural organization similar to that observed for plasmids pAW63, pBT9727and pXO2. pFR55 also shares a tra region with these plasmids, containing genes relatedto T4SS and conjugation. A comparison between pFR55 and conjugative plasmids led tothe postulation that pFR55 is a conjugative plasmid. Genes related to replication functionsin pFR55 are different to those described for plasmids with known complete sequences.pFR55 is the first completely sequenced plasmid with a replication machinery related tothat of ori44. The analysis of the complete sequence of plasmids from an environmentalisolate of B. thuringiensis permitted the identification of a near complete conjugation apparatusin pFR55, resembling those of plasmids pAW63, pBT9727 and pXO2. The availabilityof this sequence is a step forward in the study of the molecular basis of the conjugative processin Gram positive bacteria, particularly due to the similarity with known conjugationsystems. It is also a contribution to the expansion of the non-pathogenic B. cereus plasmidgene pool.Fil: Amadio, Ariel Fernando. Instituto Nacional de Tecnología Agropecuaria. Centro Regional Santa Fe. Estación Experimental Agropecuaria Rafaela; ArgentinaFil: Benintende, Graciela Beatriz. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Microbiología y Zoología Agrícola; ArgentinaFil: Zandomeni, Rubén O.. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Microbiología y Zoología Agrícola; ArgentinaAcademic Press Inc Elsevier Science2009-11info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/103969Amadio, Ariel Fernando; Benintende, Graciela Beatriz; Zandomeni, Rubén O.; Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus group; Academic Press Inc Elsevier Science; Plasmid; 62; 3; 11-2009; 172-1820147-619XCONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/http://www.elsevier.com/locate/yplasinfo:eu-repo/semantics/altIdentifier/doi/10.1016/j.plasmid.2009.07.005info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T09:56:45Zoai:ri.conicet.gov.ar:11336/103969instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 09:56:45.55CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus group
title Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus group
spellingShingle Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus group
Amadio, Ariel Fernando
Bacillus thuringiensis
Conjugation
Environmental isolate
title_short Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus group
title_full Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus group
title_fullStr Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus group
title_full_unstemmed Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus group
title_sort Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus group
dc.creator.none.fl_str_mv Amadio, Ariel Fernando
Benintende, Graciela Beatriz
Zandomeni, Rubén O.
author Amadio, Ariel Fernando
author_facet Amadio, Ariel Fernando
Benintende, Graciela Beatriz
Zandomeni, Rubén O.
author_role author
author2 Benintende, Graciela Beatriz
Zandomeni, Rubén O.
author2_role author
author
dc.subject.none.fl_str_mv Bacillus thuringiensis
Conjugation
Environmental isolate
topic Bacillus thuringiensis
Conjugation
Environmental isolate
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Bacillus thuringiensis is an insect pathogen used worldwide as a bioinsecticide. It belongs tothe Bacillus cereus sensu lato group as well as Bacillus anthracis and B. cereus. Plasmids fromthis group of organisms have been implicated in pathogenicity as they carry the genesresponsible for different types of diseases that affect mammals and insects. Some plasmids,like pAW63 and pBT9727, encode a functional conjugation machinery allowing them to betransferred to a recipient cell. They also share extensive homology with the non-functionalconjugation apparatus of pXO2 from B. anthracis. In this study we report the completesequence of three plasmids from an environmental B. thuringiensis isolate from Argentina,obtained by a shotgun sequencing method. We obtained the complete nucleotide sequenceof plasmids pFR12 (12 095 bp), pFR12.5 (12 459 bp) and pFR55 (55 712 bp) from B. thuringiensisINTA-FR7-4. pFR12 and pFR12.5 were classified as cryptic as they do not code forany obvious functions besides replication and mobilization. Both small plasmids were classifiedas RCR plasmids due to similarities with the replicases they encode. Plasmid pFR55showed a structural organization similar to that observed for plasmids pAW63, pBT9727and pXO2. pFR55 also shares a tra region with these plasmids, containing genes relatedto T4SS and conjugation. A comparison between pFR55 and conjugative plasmids led tothe postulation that pFR55 is a conjugative plasmid. Genes related to replication functionsin pFR55 are different to those described for plasmids with known complete sequences.pFR55 is the first completely sequenced plasmid with a replication machinery related tothat of ori44. The analysis of the complete sequence of plasmids from an environmentalisolate of B. thuringiensis permitted the identification of a near complete conjugation apparatusin pFR55, resembling those of plasmids pAW63, pBT9727 and pXO2. The availabilityof this sequence is a step forward in the study of the molecular basis of the conjugative processin Gram positive bacteria, particularly due to the similarity with known conjugationsystems. It is also a contribution to the expansion of the non-pathogenic B. cereus plasmidgene pool.
Fil: Amadio, Ariel Fernando. Instituto Nacional de Tecnología Agropecuaria. Centro Regional Santa Fe. Estación Experimental Agropecuaria Rafaela; Argentina
Fil: Benintende, Graciela Beatriz. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Microbiología y Zoología Agrícola; Argentina
Fil: Zandomeni, Rubén O.. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Microbiología y Zoología Agrícola; Argentina
description Bacillus thuringiensis is an insect pathogen used worldwide as a bioinsecticide. It belongs tothe Bacillus cereus sensu lato group as well as Bacillus anthracis and B. cereus. Plasmids fromthis group of organisms have been implicated in pathogenicity as they carry the genesresponsible for different types of diseases that affect mammals and insects. Some plasmids,like pAW63 and pBT9727, encode a functional conjugation machinery allowing them to betransferred to a recipient cell. They also share extensive homology with the non-functionalconjugation apparatus of pXO2 from B. anthracis. In this study we report the completesequence of three plasmids from an environmental B. thuringiensis isolate from Argentina,obtained by a shotgun sequencing method. We obtained the complete nucleotide sequenceof plasmids pFR12 (12 095 bp), pFR12.5 (12 459 bp) and pFR55 (55 712 bp) from B. thuringiensisINTA-FR7-4. pFR12 and pFR12.5 were classified as cryptic as they do not code forany obvious functions besides replication and mobilization. Both small plasmids were classifiedas RCR plasmids due to similarities with the replicases they encode. Plasmid pFR55showed a structural organization similar to that observed for plasmids pAW63, pBT9727and pXO2. pFR55 also shares a tra region with these plasmids, containing genes relatedto T4SS and conjugation. A comparison between pFR55 and conjugative plasmids led tothe postulation that pFR55 is a conjugative plasmid. Genes related to replication functionsin pFR55 are different to those described for plasmids with known complete sequences.pFR55 is the first completely sequenced plasmid with a replication machinery related tothat of ori44. The analysis of the complete sequence of plasmids from an environmentalisolate of B. thuringiensis permitted the identification of a near complete conjugation apparatusin pFR55, resembling those of plasmids pAW63, pBT9727 and pXO2. The availabilityof this sequence is a step forward in the study of the molecular basis of the conjugative processin Gram positive bacteria, particularly due to the similarity with known conjugationsystems. It is also a contribution to the expansion of the non-pathogenic B. cereus plasmidgene pool.
publishDate 2009
dc.date.none.fl_str_mv 2009-11
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/103969
Amadio, Ariel Fernando; Benintende, Graciela Beatriz; Zandomeni, Rubén O.; Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus group; Academic Press Inc Elsevier Science; Plasmid; 62; 3; 11-2009; 172-182
0147-619X
CONICET Digital
CONICET
url http://hdl.handle.net/11336/103969
identifier_str_mv Amadio, Ariel Fernando; Benintende, Graciela Beatriz; Zandomeni, Rubén O.; Complete sequence of three plasmids from Bacillus thuringiensis INTA-FR7-4 environmental isolate and comparison with related plasmids from the Bacillus cereus group; Academic Press Inc Elsevier Science; Plasmid; 62; 3; 11-2009; 172-182
0147-619X
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/http://www.elsevier.com/locate/yplas
info:eu-repo/semantics/altIdentifier/doi/10.1016/j.plasmid.2009.07.005
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Academic Press Inc Elsevier Science
publisher.none.fl_str_mv Academic Press Inc Elsevier Science
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
_version_ 1842269422097530880
score 13.13397