A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae)

Autores
Criado Ruiz, David; Vallès, Joan; Bayer, Randall J.; Palazzesi, Luis; Pellicer, Jaume; Pérez Lorenzo, Iván; Maurin, Olivier; Françoso, Elaine; Roy, Shyamali; Leitch, Ilia J.; Forest, Félix; Baker, William J.; Pokorny, Lisa; Hidalgo, Oriane; Nieto Feliner, Gonzalo
Año de publicación
2024
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
The daisy tribe Anthemideae Cass. is one of the largest and most diverse tribes within Asteraceae. We analyzed a data set including 61 out of 111 Anthemideae genera, and all but four of the 19 currently recognized subtribes (Inulantherinae, Lapidophorinae, Lonadinae, and Vogtiinae) using a targeted high‐throughput sequencing approach, the first focused on the tribe. We followed different phylogenomic approaches, using nuclear and plastid data, as well as additional analytical methods to estimate divergence times and diversification rates, to unravel the evolutionary history and classification of this tribe. Our results reinforce the phylogenetic backbone of the Anthemideae advanced in previous studies and further reveal the possible occurrence of ancient hybridization events, plastid capture, and/or incomplete lineage sorting (ILS), suggesting that complex evolutionary processes have played an important role in the evolution of this tribe. The results also support the merging of subtribe Physmasperminae into Athanasiinae and subtribe Matricariinae into Anthemidinae and clarify previously unresolved relationships. Furthermore, the study provides additional insights into the biogeographic patterns within the tribe by identifying three main groups: the Southern African Grade, the Asian Clade, and the circum‐Mediterranean Clade. These groups partially coincide with previously identified ones. Overall, this research provides a more detailed understanding of the Anthemideae tribe and improves its classification. The study also emphasizes the importance of phylogenomic approaches for deciphering the evolutionary dynamics of large and diverse plant lineages.
Fil: Criado Ruiz, David. Consejo Superior de Investigaciones Científicas. Real Jardín Botánico; España. Universidad Autónoma de Madrid; España
Fil: Vallès, Joan. Universidad de Barcelona; España
Fil: Bayer, Randall J.. University of Memphis; Estados Unidos
Fil: Palazzesi, Luis. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Museo Argentino de Ciencias Naturales "Bernardino Rivadavia"; Argentina
Fil: Pellicer, Jaume. Consejo Superior de Investigaciones Cientificas. Instituto Botanico de Barcelona.; España. Royal Botanic Gardens; Reino Unido
Fil: Pérez Lorenzo, Iván. Consejo Superior de Investigaciones Cientificas. Instituto Botanico de Barcelona.; España. Universidad de Barcelona; España
Fil: Maurin, Olivier. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino Unido
Fil: Françoso, Elaine. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino Unido
Fil: Roy, Shyamali. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino Unido
Fil: Leitch, Ilia J.. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino Unido
Fil: Forest, Félix. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino Unido
Fil: Baker, William J.. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino Unido
Fil: Pokorny, Lisa. Consejo Superior de Investigaciones Científicas. Real Jardín Botánico; España. Royal Botanic Gardens; Reino Unido
Fil: Hidalgo, Oriane. Consejo Superior de Investigaciones Cientificas. Instituto Botanico de Barcelona.; España. Royal Botanic Gardens; Reino Unido
Fil: Nieto Feliner, Gonzalo. Consejo Superior de Investigaciones Científicas. Real Jardín Botánico; España
Materia
Anthemideae
Asteraceae
Phylogenomics
Evolution
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/279180
Acceder
id CONICETDig_e76b50aabfb70f217126b9c2ff2f0bb6
oai_identifier_str oai:ri.conicet.gov.ar:11336/279180
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae)Criado Ruiz, DavidVallès, JoanBayer, Randall J.Palazzesi, LuisPellicer, JaumePérez Lorenzo, IvánMaurin, OlivierFrançoso, ElaineRoy, ShyamaliLeitch, Ilia J.Forest, FélixBaker, William J.Pokorny, LisaHidalgo, OrianeNieto Feliner, GonzaloAnthemideaeAsteraceaePhylogenomicsEvolutionhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1The daisy tribe Anthemideae Cass. is one of the largest and most diverse tribes within Asteraceae. We analyzed a data set including 61 out of 111 Anthemideae genera, and all but four of the 19 currently recognized subtribes (Inulantherinae, Lapidophorinae, Lonadinae, and Vogtiinae) using a targeted high‐throughput sequencing approach, the first focused on the tribe. We followed different phylogenomic approaches, using nuclear and plastid data, as well as additional analytical methods to estimate divergence times and diversification rates, to unravel the evolutionary history and classification of this tribe. Our results reinforce the phylogenetic backbone of the Anthemideae advanced in previous studies and further reveal the possible occurrence of ancient hybridization events, plastid capture, and/or incomplete lineage sorting (ILS), suggesting that complex evolutionary processes have played an important role in the evolution of this tribe. The results also support the merging of subtribe Physmasperminae into Athanasiinae and subtribe Matricariinae into Anthemidinae and clarify previously unresolved relationships. Furthermore, the study provides additional insights into the biogeographic patterns within the tribe by identifying three main groups: the Southern African Grade, the Asian Clade, and the circum‐Mediterranean Clade. These groups partially coincide with previously identified ones. Overall, this research provides a more detailed understanding of the Anthemideae tribe and improves its classification. The study also emphasizes the importance of phylogenomic approaches for deciphering the evolutionary dynamics of large and diverse plant lineages.Fil: Criado Ruiz, David. Consejo Superior de Investigaciones Científicas. Real Jardín Botánico; España. Universidad Autónoma de Madrid; EspañaFil: Vallès, Joan. Universidad de Barcelona; EspañaFil: Bayer, Randall J.. University of Memphis; Estados UnidosFil: Palazzesi, Luis. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Museo Argentino de Ciencias Naturales "Bernardino Rivadavia"; ArgentinaFil: Pellicer, Jaume. Consejo Superior de Investigaciones Cientificas. Instituto Botanico de Barcelona.; España. Royal Botanic Gardens; Reino UnidoFil: Pérez Lorenzo, Iván. Consejo Superior de Investigaciones Cientificas. Instituto Botanico de Barcelona.; España. Universidad de Barcelona; EspañaFil: Maurin, Olivier. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino UnidoFil: Françoso, Elaine. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino UnidoFil: Roy, Shyamali. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino UnidoFil: Leitch, Ilia J.. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino UnidoFil: Forest, Félix. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino UnidoFil: Baker, William J.. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino UnidoFil: Pokorny, Lisa. Consejo Superior de Investigaciones Científicas. Real Jardín Botánico; España. Royal Botanic Gardens; Reino UnidoFil: Hidalgo, Oriane. Consejo Superior de Investigaciones Cientificas. Instituto Botanico de Barcelona.; España. Royal Botanic Gardens; Reino UnidoFil: Nieto Feliner, Gonzalo. Consejo Superior de Investigaciones Científicas. Real Jardín Botánico; EspañaWiley2024-08info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/279180Criado Ruiz, David; Vallès, Joan; Bayer, Randall J.; Palazzesi, Luis; Pellicer, Jaume; et al.; A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae); Wiley; Journal Of Systematics And Evolution; 63; 2; 8-2024; 282-3061674-49181759-6831CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/10.1111/jse.13118info:eu-repo/semantics/altIdentifier/doi/10.1111/jse.13118info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2026-02-06T13:47:14Zoai:ri.conicet.gov.ar:11336/279180instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982026-02-06 13:47:14.706CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae)
title A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae)
spellingShingle A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae)
Criado Ruiz, David
Anthemideae
Asteraceae
Phylogenomics
Evolution
title_short A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae)
title_full A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae)
title_fullStr A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae)
title_full_unstemmed A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae)
title_sort A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae)
dc.creator.none.fl_str_mv Criado Ruiz, David
Vallès, Joan
Bayer, Randall J.
Palazzesi, Luis
Pellicer, Jaume
Pérez Lorenzo, Iván
Maurin, Olivier
Françoso, Elaine
Roy, Shyamali
Leitch, Ilia J.
Forest, Félix
Baker, William J.
Pokorny, Lisa
Hidalgo, Oriane
Nieto Feliner, Gonzalo
author Criado Ruiz, David
author_facet Criado Ruiz, David
Vallès, Joan
Bayer, Randall J.
Palazzesi, Luis
Pellicer, Jaume
Pérez Lorenzo, Iván
Maurin, Olivier
Françoso, Elaine
Roy, Shyamali
Leitch, Ilia J.
Forest, Félix
Baker, William J.
Pokorny, Lisa
Hidalgo, Oriane
Nieto Feliner, Gonzalo
author_role author
author2 Vallès, Joan
Bayer, Randall J.
Palazzesi, Luis
Pellicer, Jaume
Pérez Lorenzo, Iván
Maurin, Olivier
Françoso, Elaine
Roy, Shyamali
Leitch, Ilia J.
Forest, Félix
Baker, William J.
Pokorny, Lisa
Hidalgo, Oriane
Nieto Feliner, Gonzalo
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Anthemideae
Asteraceae
Phylogenomics
Evolution
topic Anthemideae
Asteraceae
Phylogenomics
Evolution
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv The daisy tribe Anthemideae Cass. is one of the largest and most diverse tribes within Asteraceae. We analyzed a data set including 61 out of 111 Anthemideae genera, and all but four of the 19 currently recognized subtribes (Inulantherinae, Lapidophorinae, Lonadinae, and Vogtiinae) using a targeted high‐throughput sequencing approach, the first focused on the tribe. We followed different phylogenomic approaches, using nuclear and plastid data, as well as additional analytical methods to estimate divergence times and diversification rates, to unravel the evolutionary history and classification of this tribe. Our results reinforce the phylogenetic backbone of the Anthemideae advanced in previous studies and further reveal the possible occurrence of ancient hybridization events, plastid capture, and/or incomplete lineage sorting (ILS), suggesting that complex evolutionary processes have played an important role in the evolution of this tribe. The results also support the merging of subtribe Physmasperminae into Athanasiinae and subtribe Matricariinae into Anthemidinae and clarify previously unresolved relationships. Furthermore, the study provides additional insights into the biogeographic patterns within the tribe by identifying three main groups: the Southern African Grade, the Asian Clade, and the circum‐Mediterranean Clade. These groups partially coincide with previously identified ones. Overall, this research provides a more detailed understanding of the Anthemideae tribe and improves its classification. The study also emphasizes the importance of phylogenomic approaches for deciphering the evolutionary dynamics of large and diverse plant lineages.
Fil: Criado Ruiz, David. Consejo Superior de Investigaciones Científicas. Real Jardín Botánico; España. Universidad Autónoma de Madrid; España
Fil: Vallès, Joan. Universidad de Barcelona; España
Fil: Bayer, Randall J.. University of Memphis; Estados Unidos
Fil: Palazzesi, Luis. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Museo Argentino de Ciencias Naturales "Bernardino Rivadavia"; Argentina
Fil: Pellicer, Jaume. Consejo Superior de Investigaciones Cientificas. Instituto Botanico de Barcelona.; España. Royal Botanic Gardens; Reino Unido
Fil: Pérez Lorenzo, Iván. Consejo Superior de Investigaciones Cientificas. Instituto Botanico de Barcelona.; España. Universidad de Barcelona; España
Fil: Maurin, Olivier. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino Unido
Fil: Françoso, Elaine. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino Unido
Fil: Roy, Shyamali. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino Unido
Fil: Leitch, Ilia J.. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino Unido
Fil: Forest, Félix. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino Unido
Fil: Baker, William J.. Royal Botanic Gardens, Kew. Jodrell Laboratory. Departamento Botanic. Molecular Systematics; Reino Unido
Fil: Pokorny, Lisa. Consejo Superior de Investigaciones Científicas. Real Jardín Botánico; España. Royal Botanic Gardens; Reino Unido
Fil: Hidalgo, Oriane. Consejo Superior de Investigaciones Cientificas. Instituto Botanico de Barcelona.; España. Royal Botanic Gardens; Reino Unido
Fil: Nieto Feliner, Gonzalo. Consejo Superior de Investigaciones Científicas. Real Jardín Botánico; España
description The daisy tribe Anthemideae Cass. is one of the largest and most diverse tribes within Asteraceae. We analyzed a data set including 61 out of 111 Anthemideae genera, and all but four of the 19 currently recognized subtribes (Inulantherinae, Lapidophorinae, Lonadinae, and Vogtiinae) using a targeted high‐throughput sequencing approach, the first focused on the tribe. We followed different phylogenomic approaches, using nuclear and plastid data, as well as additional analytical methods to estimate divergence times and diversification rates, to unravel the evolutionary history and classification of this tribe. Our results reinforce the phylogenetic backbone of the Anthemideae advanced in previous studies and further reveal the possible occurrence of ancient hybridization events, plastid capture, and/or incomplete lineage sorting (ILS), suggesting that complex evolutionary processes have played an important role in the evolution of this tribe. The results also support the merging of subtribe Physmasperminae into Athanasiinae and subtribe Matricariinae into Anthemidinae and clarify previously unresolved relationships. Furthermore, the study provides additional insights into the biogeographic patterns within the tribe by identifying three main groups: the Southern African Grade, the Asian Clade, and the circum‐Mediterranean Clade. These groups partially coincide with previously identified ones. Overall, this research provides a more detailed understanding of the Anthemideae tribe and improves its classification. The study also emphasizes the importance of phylogenomic approaches for deciphering the evolutionary dynamics of large and diverse plant lineages.
publishDate 2024
dc.date.none.fl_str_mv 2024-08
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/279180
Criado Ruiz, David; Vallès, Joan; Bayer, Randall J.; Palazzesi, Luis; Pellicer, Jaume; et al.; A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae); Wiley; Journal Of Systematics And Evolution; 63; 2; 8-2024; 282-306
1674-4918
1759-6831
CONICET Digital
CONICET
url http://hdl.handle.net/11336/279180
identifier_str_mv Criado Ruiz, David; Vallès, Joan; Bayer, Randall J.; Palazzesi, Luis; Pellicer, Jaume; et al.; A phylogenomic approach to disentangling the evolution of the large and diverse daisy tribe Anthemideae (Asteraceae); Wiley; Journal Of Systematics And Evolution; 63; 2; 8-2024; 282-306
1674-4918
1759-6831
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/10.1111/jse.13118
info:eu-repo/semantics/altIdentifier/doi/10.1111/jse.13118
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Wiley
publisher.none.fl_str_mv Wiley
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
_version_ 1856403667878412288
score 12.595271

Publicaciones similares