Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomics

Autores
Villalba, María S.; Hernández, Martín Alejandro; Silva, Roxana Alejandra; Alvarez, Hector Manuel
Año de publicación
2013
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Bacteria belonging to the Rhodococcus genus are usu-ally able to synthesize and accumulate variable amounts of triacylglycerols (TAG) from diverse car-bon sources. Although some significant advances in the basic knowledge on TAG metabolism in rhodococci have been made, the fundamental under-standing of this process and its regulation remains to be clarified. The abundantly available genomic infor-mation for several rhodococcal species provides the possibility for comparative genome analysis on the occurrence and distribution of key genes and pathways involved in TAG metabolism. Our bioinformatic analyses of available databases from six rhodococcal strains demonstrated that genes/enzymes for reactions related to TAG biosynthesis and degradation, and fatty acid β-oxidation are surprisingly abundant in rhodococcal genomes. Several genes/enzymes of glyc-erolipids and fatty acid metabolism are highly repre-sented in the analyzed genomes. A number of previ-ously undescribed, new putative genes for glycerolipid metabolism in rhodococci have been identified and the size of each family has been estimated.
Fil: Villalba, María S.. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Comodoro; Argentina. Oil m&s; Argentina
Fil: Hernández, Martín Alejandro. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Comodoro; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Nacional Patagónico; Argentina
Fil: Silva, Roxana Alejandra. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Comodoro; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Nacional Patagónico; Argentina
Fil: Alvarez, Hector Manuel. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Comodoro; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Nacional Patagónico; Argentina
Materia
Rhodococcus
Triacylglycerols
Physiology
Genetics
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/3496
Acceder
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network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomicsVillalba, María S.Hernández, Martín AlejandroSilva, Roxana AlejandraAlvarez, Hector ManuelRhodococcusTriacylglycerolsPhysiologyGeneticshttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1https://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Bacteria belonging to the Rhodococcus genus are usu-ally able to synthesize and accumulate variable amounts of triacylglycerols (TAG) from diverse car-bon sources. Although some significant advances in the basic knowledge on TAG metabolism in rhodococci have been made, the fundamental under-standing of this process and its regulation remains to be clarified. The abundantly available genomic infor-mation for several rhodococcal species provides the possibility for comparative genome analysis on the occurrence and distribution of key genes and pathways involved in TAG metabolism. Our bioinformatic analyses of available databases from six rhodococcal strains demonstrated that genes/enzymes for reactions related to TAG biosynthesis and degradation, and fatty acid β-oxidation are surprisingly abundant in rhodococcal genomes. Several genes/enzymes of glyc-erolipids and fatty acid metabolism are highly repre-sented in the analyzed genomes. A number of previ-ously undescribed, new putative genes for glycerolipid metabolism in rhodococci have been identified and the size of each family has been estimated.Fil: Villalba, María S.. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Comodoro; Argentina. Oil m&s; ArgentinaFil: Hernández, Martín Alejandro. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Comodoro; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Nacional Patagónico; ArgentinaFil: Silva, Roxana Alejandra. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Comodoro; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Nacional Patagónico; ArgentinaFil: Alvarez, Hector Manuel. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Comodoro; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Nacional Patagónico; ArgentinaLorem Ipsum Press2013-06info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/3496Villalba, María S.; Hernández, Martín Alejandro; Silva, Roxana Alejandra; Alvarez, Hector Manuel; Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomics; Lorem Ipsum Press; Journal of Molecular Biochemistry; 2; 2; 6-2013; 94-1052241-0090enginfo:eu-repo/semantics/altIdentifier/url/http://www.jmolbiochem.com/index.php/JmolBiochem/article/view/90info:eu-repo/semantics/altIdentifier/issn/2241-0090info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T09:48:58Zoai:ri.conicet.gov.ar:11336/3496instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 09:48:58.897CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomics
title Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomics
spellingShingle Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomics
Villalba, María S.
Rhodococcus
Triacylglycerols
Physiology
Genetics
title_short Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomics
title_full Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomics
title_fullStr Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomics
title_full_unstemmed Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomics
title_sort Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomics
dc.creator.none.fl_str_mv Villalba, María S.
Hernández, Martín Alejandro
Silva, Roxana Alejandra
Alvarez, Hector Manuel
author Villalba, María S.
author_facet Villalba, María S.
Hernández, Martín Alejandro
Silva, Roxana Alejandra
Alvarez, Hector Manuel
author_role author
author2 Hernández, Martín Alejandro
Silva, Roxana Alejandra
Alvarez, Hector Manuel
author2_role author
author
author
dc.subject.none.fl_str_mv Rhodococcus
Triacylglycerols
Physiology
Genetics
topic Rhodococcus
Triacylglycerols
Physiology
Genetics
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Bacteria belonging to the Rhodococcus genus are usu-ally able to synthesize and accumulate variable amounts of triacylglycerols (TAG) from diverse car-bon sources. Although some significant advances in the basic knowledge on TAG metabolism in rhodococci have been made, the fundamental under-standing of this process and its regulation remains to be clarified. The abundantly available genomic infor-mation for several rhodococcal species provides the possibility for comparative genome analysis on the occurrence and distribution of key genes and pathways involved in TAG metabolism. Our bioinformatic analyses of available databases from six rhodococcal strains demonstrated that genes/enzymes for reactions related to TAG biosynthesis and degradation, and fatty acid β-oxidation are surprisingly abundant in rhodococcal genomes. Several genes/enzymes of glyc-erolipids and fatty acid metabolism are highly repre-sented in the analyzed genomes. A number of previ-ously undescribed, new putative genes for glycerolipid metabolism in rhodococci have been identified and the size of each family has been estimated.
Fil: Villalba, María S.. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Comodoro; Argentina. Oil m&s; Argentina
Fil: Hernández, Martín Alejandro. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Comodoro; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Nacional Patagónico; Argentina
Fil: Silva, Roxana Alejandra. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Comodoro; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Nacional Patagónico; Argentina
Fil: Alvarez, Hector Manuel. Universidad Nacional de la Patagonia "San Juan Bosco". Facultad de Ciencias Naturales - Sede Comodoro; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Nacional Patagónico; Argentina
description Bacteria belonging to the Rhodococcus genus are usu-ally able to synthesize and accumulate variable amounts of triacylglycerols (TAG) from diverse car-bon sources. Although some significant advances in the basic knowledge on TAG metabolism in rhodococci have been made, the fundamental under-standing of this process and its regulation remains to be clarified. The abundantly available genomic infor-mation for several rhodococcal species provides the possibility for comparative genome analysis on the occurrence and distribution of key genes and pathways involved in TAG metabolism. Our bioinformatic analyses of available databases from six rhodococcal strains demonstrated that genes/enzymes for reactions related to TAG biosynthesis and degradation, and fatty acid β-oxidation are surprisingly abundant in rhodococcal genomes. Several genes/enzymes of glyc-erolipids and fatty acid metabolism are highly repre-sented in the analyzed genomes. A number of previ-ously undescribed, new putative genes for glycerolipid metabolism in rhodococci have been identified and the size of each family has been estimated.
publishDate 2013
dc.date.none.fl_str_mv 2013-06
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/3496
Villalba, María S.; Hernández, Martín Alejandro; Silva, Roxana Alejandra; Alvarez, Hector Manuel; Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomics; Lorem Ipsum Press; Journal of Molecular Biochemistry; 2; 2; 6-2013; 94-105
2241-0090
url http://hdl.handle.net/11336/3496
identifier_str_mv Villalba, María S.; Hernández, Martín Alejandro; Silva, Roxana Alejandra; Alvarez, Hector Manuel; Genome sequences of triacylglycerol metabolism in Rhodococcus as a platform for comparative genomics; Lorem Ipsum Press; Journal of Molecular Biochemistry; 2; 2; 6-2013; 94-105
2241-0090
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/http://www.jmolbiochem.com/index.php/JmolBiochem/article/view/90
info:eu-repo/semantics/altIdentifier/issn/2241-0090
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
application/pdf
application/pdf
dc.publisher.none.fl_str_mv Lorem Ipsum Press
publisher.none.fl_str_mv Lorem Ipsum Press
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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