Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milk

Autores
Quilodrán-Vega, Sandra Rayén; Albarracín, Leonardo Miguel; Hebert, Elvira Maria; Saavedra, Maria Lucila; Fonseca, Alexis; Salas-Burgos, Alexis; Kitazawa, Haruki; Villena, Julio Cesar
Año de publicación
2018
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
This report describes the draft genome sequence of Lactobacillus brevisTUCO-5E, a probiotic strain isolated from porcine maternal milk. The reads were generated by a whole-genome sequencing (WGS) strategy on an Illumina MiSeq sequencer and were assembled into contigs with a total estimated size of 2,461,089 bp. A total of 2,455 open reading frames (ORFs) were predicted, including 2,301 protein-coding sequences. The draft genome sequence of L. brevis TUCO-5E will be useful for further studies of specific genetic features and for understanding the mechanisms of its probiotic properties in the porcine host.
Fil: Quilodrán-Vega, Sandra Rayén. Universidad de Concepción. Facultad de Medicina Veterinaria. Departamento de Medicina Preventiva y Patología; Chile
Fil: Albarracín, Leonardo Miguel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Centro de Referencia para Lactobacilos; Argentina
Fil: Hebert, Elvira Maria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Centro de Referencia para Lactobacilos; Argentina
Fil: Saavedra, Maria Lucila. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Centro de Referencia para Lactobacilos; Argentina
Fil: Fonseca, Alexis. Universidad de Concepción. Departmento de Farmacología; Chile
Fil: Salas-Burgos, Alexis. Universidad de Concepción. Departmento de Farmacología; Chile
Fil: Kitazawa, Haruki. Tohoku University. Graduate School of Agricultural Science. Food and Feed Immunology Group; Japón
Fil: Villena, Julio Cesar. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Centro de Referencia para Lactobacilos; Argentina. Universidad Nacional de Tucumán; Argentina
Materia
GENOME SEQUENCE
PORCINE MILK
PROBIOTIC
LACTOBACILLUS BREVIS TUCO-5E
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/82637
Acceder
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oai_identifier_str oai:ri.conicet.gov.ar:11336/82637
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milkQuilodrán-Vega, Sandra RayénAlbarracín, Leonardo MiguelHebert, Elvira MariaSaavedra, Maria LucilaFonseca, AlexisSalas-Burgos, AlexisKitazawa, HarukiVillena, Julio CesarGENOME SEQUENCEPORCINE MILKPROBIOTICLACTOBACILLUS BREVIS TUCO-5Ehttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1https://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1This report describes the draft genome sequence of Lactobacillus brevisTUCO-5E, a probiotic strain isolated from porcine maternal milk. The reads were generated by a whole-genome sequencing (WGS) strategy on an Illumina MiSeq sequencer and were assembled into contigs with a total estimated size of 2,461,089 bp. A total of 2,455 open reading frames (ORFs) were predicted, including 2,301 protein-coding sequences. The draft genome sequence of L. brevis TUCO-5E will be useful for further studies of specific genetic features and for understanding the mechanisms of its probiotic properties in the porcine host.Fil: Quilodrán-Vega, Sandra Rayén. Universidad de Concepción. Facultad de Medicina Veterinaria. Departamento de Medicina Preventiva y Patología; ChileFil: Albarracín, Leonardo Miguel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Centro de Referencia para Lactobacilos; ArgentinaFil: Hebert, Elvira Maria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Centro de Referencia para Lactobacilos; ArgentinaFil: Saavedra, Maria Lucila. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Centro de Referencia para Lactobacilos; ArgentinaFil: Fonseca, Alexis. Universidad de Concepción. Departmento de Farmacología; ChileFil: Salas-Burgos, Alexis. Universidad de Concepción. Departmento de Farmacología; ChileFil: Kitazawa, Haruki. Tohoku University. Graduate School of Agricultural Science. Food and Feed Immunology Group; JapónFil: Villena, Julio Cesar. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Centro de Referencia para Lactobacilos; Argentina. Universidad Nacional de Tucumán; ArgentinaAmerican Society of Microbiology2018-11-15info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/82637Quilodrán-Vega, Sandra Rayén; Albarracín, Leonardo Miguel; Hebert, Elvira Maria; Saavedra, Maria Lucila; Fonseca, Alexis; et al.; Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milk; American Society of Microbiology; Microbiology Resource Announcements; 7; 19; 15-11-2018; 1-2;e01239-18-e01239-182576-098X2576-098XCONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1128/MRA.01239-18info:eu-repo/semantics/altIdentifier/url/https://mra.asm.org/content/7/19/e01239-18info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:42:05Zoai:ri.conicet.gov.ar:11336/82637instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:42:06.174CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milk
title Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milk
spellingShingle Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milk
Quilodrán-Vega, Sandra Rayén
GENOME SEQUENCE
PORCINE MILK
PROBIOTIC
LACTOBACILLUS BREVIS TUCO-5E
title_short Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milk
title_full Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milk
title_fullStr Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milk
title_full_unstemmed Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milk
title_sort Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milk
dc.creator.none.fl_str_mv Quilodrán-Vega, Sandra Rayén
Albarracín, Leonardo Miguel
Hebert, Elvira Maria
Saavedra, Maria Lucila
Fonseca, Alexis
Salas-Burgos, Alexis
Kitazawa, Haruki
Villena, Julio Cesar
author Quilodrán-Vega, Sandra Rayén
author_facet Quilodrán-Vega, Sandra Rayén
Albarracín, Leonardo Miguel
Hebert, Elvira Maria
Saavedra, Maria Lucila
Fonseca, Alexis
Salas-Burgos, Alexis
Kitazawa, Haruki
Villena, Julio Cesar
author_role author
author2 Albarracín, Leonardo Miguel
Hebert, Elvira Maria
Saavedra, Maria Lucila
Fonseca, Alexis
Salas-Burgos, Alexis
Kitazawa, Haruki
Villena, Julio Cesar
author2_role author
author
author
author
author
author
author
dc.subject.none.fl_str_mv GENOME SEQUENCE
PORCINE MILK
PROBIOTIC
LACTOBACILLUS BREVIS TUCO-5E
topic GENOME SEQUENCE
PORCINE MILK
PROBIOTIC
LACTOBACILLUS BREVIS TUCO-5E
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv This report describes the draft genome sequence of Lactobacillus brevisTUCO-5E, a probiotic strain isolated from porcine maternal milk. The reads were generated by a whole-genome sequencing (WGS) strategy on an Illumina MiSeq sequencer and were assembled into contigs with a total estimated size of 2,461,089 bp. A total of 2,455 open reading frames (ORFs) were predicted, including 2,301 protein-coding sequences. The draft genome sequence of L. brevis TUCO-5E will be useful for further studies of specific genetic features and for understanding the mechanisms of its probiotic properties in the porcine host.
Fil: Quilodrán-Vega, Sandra Rayén. Universidad de Concepción. Facultad de Medicina Veterinaria. Departamento de Medicina Preventiva y Patología; Chile
Fil: Albarracín, Leonardo Miguel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Centro de Referencia para Lactobacilos; Argentina
Fil: Hebert, Elvira Maria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Centro de Referencia para Lactobacilos; Argentina
Fil: Saavedra, Maria Lucila. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Centro de Referencia para Lactobacilos; Argentina
Fil: Fonseca, Alexis. Universidad de Concepción. Departmento de Farmacología; Chile
Fil: Salas-Burgos, Alexis. Universidad de Concepción. Departmento de Farmacología; Chile
Fil: Kitazawa, Haruki. Tohoku University. Graduate School of Agricultural Science. Food and Feed Immunology Group; Japón
Fil: Villena, Julio Cesar. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Centro de Referencia para Lactobacilos; Argentina. Universidad Nacional de Tucumán; Argentina
description This report describes the draft genome sequence of Lactobacillus brevisTUCO-5E, a probiotic strain isolated from porcine maternal milk. The reads were generated by a whole-genome sequencing (WGS) strategy on an Illumina MiSeq sequencer and were assembled into contigs with a total estimated size of 2,461,089 bp. A total of 2,455 open reading frames (ORFs) were predicted, including 2,301 protein-coding sequences. The draft genome sequence of L. brevis TUCO-5E will be useful for further studies of specific genetic features and for understanding the mechanisms of its probiotic properties in the porcine host.
publishDate 2018
dc.date.none.fl_str_mv 2018-11-15
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/82637
Quilodrán-Vega, Sandra Rayén; Albarracín, Leonardo Miguel; Hebert, Elvira Maria; Saavedra, Maria Lucila; Fonseca, Alexis; et al.; Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milk; American Society of Microbiology; Microbiology Resource Announcements; 7; 19; 15-11-2018; 1-2;e01239-18-e01239-18
2576-098X
2576-098X
CONICET Digital
CONICET
url http://hdl.handle.net/11336/82637
identifier_str_mv Quilodrán-Vega, Sandra Rayén; Albarracín, Leonardo Miguel; Hebert, Elvira Maria; Saavedra, Maria Lucila; Fonseca, Alexis; et al.; Draft genome sequence of probiotic lactobacillus brevis TUCO-5E, isolated from porcine milk; American Society of Microbiology; Microbiology Resource Announcements; 7; 19; 15-11-2018; 1-2;e01239-18-e01239-18
2576-098X
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1128/MRA.01239-18
info:eu-repo/semantics/altIdentifier/url/https://mra.asm.org/content/7/19/e01239-18
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
application/pdf
application/pdf
application/pdf
dc.publisher.none.fl_str_mv American Society of Microbiology
publisher.none.fl_str_mv American Society of Microbiology
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.070432

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